RNA–Protein interactions for RNA: ENST00000568034.1

COMMD4-222, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,085 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-222ENST00000568034 FANCGO15287 622 aa18.37■□□□□ 0.53
COMMD4-222ENST00000568034 SMAD6O43541 496 aaKnown RBP18.37■□□□□ 0.53
COMMD4-222ENST00000568034 ATP9BO43861 1147 aa18.37■□□□□ 0.53
COMMD4-222ENST00000568034 PRAMEF11O60813 436 aa18.37■□□□□ 0.53
COMMD4-222ENST00000568034 PEX11BO96011 259 aa18.37■□□□□ 0.53
COMMD4-222ENST00000568034 SRCP12931 536 aa18.37■□□□□ 0.53
COMMD4-222ENST00000568034 HLA-EP13747 358 aa18.37■□□□□ 0.53
COMMD4-222ENST00000568034 PECAM1P16284 738 aaPredicted RBP18.37■□□□□ 0.53
COMMD4-222ENST00000568034 SERPINH1P50454 418 aaKnown RBP18.37■□□□□ 0.53
COMMD4-222ENST00000568034 TFDP2Q14188 446 aa18.37■□□□□ 0.53
COMMD4-222ENST00000568034 FNDC3BQ53EP0 1204 aaKnown RBP18.37■□□□□ 0.53
COMMD4-222ENST00000568034 SYT13Q7L8C5 426 aa18.37■□□□□ 0.53
COMMD4-222ENST00000568034 TRMT11Q7Z4G4 463 aaKnown RBP18.37■□□□□ 0.53
COMMD4-222ENST00000568034 ZNF366Q8N895 744 aa18.37■□□□□ 0.53
COMMD4-222ENST00000568034 OLFM3Q96PB7 478 aa18.37■□□□□ 0.53
COMMD4-222ENST00000568034 MAK16Q9BXY0 300 aaKnown RBP18.37■□□□□ 0.53
COMMD4-222ENST00000568034 CARD9Q9H257 536 aa18.37■□□□□ 0.53
COMMD4-222ENST00000568034 MTG2Q9H4K7 406 aa18.37■□□□□ 0.53
COMMD4-222ENST00000568034 IPO11Q9UI26 975 aaKnown RBP18.37■□□□□ 0.53
COMMD4-222ENST00000568034 SLC25A13Q9UJS0 675 aa18.37■□□□□ 0.53
COMMD4-222ENST00000568034 PLA2G4CQ9UP65 541 aa18.37■□□□□ 0.53
COMMD4-222ENST00000568034 ZKSCAN5Q9Y2L8 839 aa18.37■□□□□ 0.53
COMMD4-222ENST00000568034 JRKLQ9Y4A0 524 aa18.37■□□□□ 0.53
COMMD4-222ENST00000568034 RAD54BQ9Y620 910 aa18.37■□□□□ 0.53
COMMD4-222ENST00000568034 CACNA1IQ9P0X4 2223 aa18.37■□□□□ 0.53
COMMD4-222ENST00000568034 TTC34A8MYJ7 566 aa18.36■□□□□ 0.53
COMMD4-222ENST00000568034 MAFKO60675 156 aa18.36■□□□□ 0.53
COMMD4-222ENST00000568034 ZNF821O75541 412 aaPredicted RBP18.36■□□□□ 0.53
COMMD4-222ENST00000568034 ATP1A1P05023 1023 aaKnown RBP18.36■□□□□ 0.53
COMMD4-222ENST00000568034 ZFXP17010 805 aaPredicted RBP18.36■□□□□ 0.53
COMMD4-222ENST00000568034 TGM2P21980 687 aa18.36■□□□□ 0.53
COMMD4-222ENST00000568034 GARSP41250 739 aaKnown RBP18.36■□□□□ 0.53
COMMD4-222ENST00000568034 SATB1Q01826 763 aa18.36■□□□□ 0.53
COMMD4-222ENST00000568034 KLF1Q13351 362 aaPredicted RBP18.36■□□□□ 0.53
COMMD4-222ENST00000568034 CRY1Q16526 586 aa18.36■□□□□ 0.53
COMMD4-222ENST00000568034 EOGTQ5NDL2 527 aa18.36■□□□□ 0.53
COMMD4-222ENST00000568034 RETSATQ6NUM9 610 aa18.36■□□□□ 0.53
COMMD4-222ENST00000568034 KIAA1211LQ6NV74 962 aa18.36■□□□□ 0.53
COMMD4-222ENST00000568034 SERPINA13PQ6UXR4 307 aa18.36■□□□□ 0.53
COMMD4-222ENST00000568034 LEKR1Q6ZMV7 388 aa18.36■□□□□ 0.53
COMMD4-222ENST00000568034 DTWD2Q8NBA8 298 aa18.36■□□□□ 0.53
COMMD4-222ENST00000568034 WDR24Q96S15 920 aa18.36■□□□□ 0.53
COMMD4-222ENST00000568034 LRFN3Q9BTN0 628 aa18.36■□□□□ 0.53
COMMD4-222ENST00000568034 PRMT8Q9NR22 394 aaPredicted RBP18.36■□□□□ 0.53
COMMD4-222ENST00000568034 SAE1Q9UBE0 346 aaPredicted RBP18.36■□□□□ 0.53
COMMD4-222ENST00000568034 ZSCAN5CA6NGD5 496 aaPredicted RBP18.35■□□□□ 0.53
COMMD4-222ENST00000568034 KCNK3O14649 394 aa18.35■□□□□ 0.53
COMMD4-222ENST00000568034 ATG13O75143 517 aa18.35■□□□□ 0.53
COMMD4-222ENST00000568034 PAPSS2O95340 614 aaPredicted RBP18.35■□□□□ 0.53
COMMD4-222ENST00000568034 HOXB2P14652 356 aa18.35■□□□□ 0.53
COMMD4-222ENST00000568034 VAV1P15498 845 aa18.35■□□□□ 0.53
COMMD4-222ENST00000568034 CLCN6P51797 869 aa18.35■□□□□ 0.53
COMMD4-222ENST00000568034 IL10RBQ08334 325 aa18.35■□□□□ 0.53
COMMD4-222ENST00000568034 SLC20A2Q08357 652 aa18.35■□□□□ 0.53
COMMD4-222ENST00000568034 E2F5Q15329 346 aa18.35■□□□□ 0.53
COMMD4-222ENST00000568034 HNRNPA1L2Q32P51 320 aaKnown RBP18.35■□□□□ 0.53
COMMD4-222ENST00000568034 ZNF354CQ86Y25 554 aa18.35■□□□□ 0.53
COMMD4-222ENST00000568034 MAML2Q8IZL2 1156 aaPredicted RBP18.35■□□□□ 0.53
COMMD4-222ENST00000568034 ATPAF2Q8N5M1 289 aa18.35■□□□□ 0.53
COMMD4-222ENST00000568034 LRRN4Q8WUT4 740 aa18.35■□□□□ 0.53
COMMD4-222ENST00000568034 HPCAL4Q9UM19 191 aa18.35■□□□□ 0.53
COMMD4-222ENST00000568034 FCF1Q9Y324 198 aaKnown RBP18.35■□□□□ 0.53
COMMD4-222ENST00000568034 TCRBV7S2A1N4TA0A589 114 aa18.34■□□□□ 0.53
COMMD4-222ENST00000568034 K7ESF4 209 aa18.34■□□□□ 0.53
COMMD4-222ENST00000568034 TMCC1O94876 653 aa18.34■□□□□ 0.53
COMMD4-222ENST00000568034 TDGF1P13385 188 aa18.34■□□□□ 0.53
COMMD4-222ENST00000568034 ST8SIA6P61647 398 aa18.34■□□□□ 0.53
COMMD4-222ENST00000568034 GNG11P61952 73 aa18.34■□□□□ 0.53
COMMD4-222ENST00000568034 CAMK2GQ13555 558 aaPredicted RBP18.34■□□□□ 0.53
COMMD4-222ENST00000568034 DLG2Q15700 870 aa18.34■□□□□ 0.53
COMMD4-222ENST00000568034 C22orf39Q6P5X5 142 aa18.34■□□□□ 0.53
COMMD4-222ENST00000568034 LRRC49Q8IUZ0 686 aa18.34■□□□□ 0.53
COMMD4-222ENST00000568034 ATP11CQ8NB49 1132 aa18.34■□□□□ 0.53
COMMD4-222ENST00000568034 PTPRN2Q92932 1015 aa18.34■□□□□ 0.53
COMMD4-222ENST00000568034 HAUS1Q96CS2 278 aa18.34■□□□□ 0.53
COMMD4-222ENST00000568034 HDAC11Q96DB2 347 aa18.34■□□□□ 0.53
COMMD4-222ENST00000568034 ZNF419Q96HQ0 510 aaPredicted RBP18.34■□□□□ 0.53
COMMD4-222ENST00000568034 TSGA13Q96PP4 275 aa18.34■□□□□ 0.53
COMMD4-222ENST00000568034 SP110Q9HB58 689 aa18.34■□□□□ 0.53
COMMD4-222ENST00000568034 SPATA6Q9NWH7 488 aaPredicted RBP18.34■□□□□ 0.53
COMMD4-222ENST00000568034 UBA2Q9UBT2 640 aaPredicted RBP18.34■□□□□ 0.53
COMMD4-222ENST00000568034 HEY1Q9Y5J3 304 aa18.34■□□□□ 0.53
COMMD4-222ENST00000568034 APOC4-APOC2K7ER74 178 aa18.33■□□□□ 0.52
COMMD4-222ENST00000568034 SIN3BO75182 1162 aa18.33■□□□□ 0.52
COMMD4-222ENST00000568034 APOC2P02655 101 aa18.33■□□□□ 0.52
COMMD4-222ENST00000568034 EPHX1P07099 455 aa18.33■□□□□ 0.52
COMMD4-222ENST00000568034 C7P10643 843 aa18.33■□□□□ 0.52
COMMD4-222ENST00000568034 MX2P20592 715 aa18.33■□□□□ 0.52
COMMD4-222ENST00000568034 CCR3P51677 355 aa18.33■□□□□ 0.52
COMMD4-222ENST00000568034 PPIDQ08752 370 aaKnown RBP18.33■□□□□ 0.52
COMMD4-222ENST00000568034 CYTH1Q15438 398 aa18.33■□□□□ 0.52
COMMD4-222ENST00000568034 INO80DQ53TQ3 878 aaPredicted RBP18.33■□□□□ 0.52
COMMD4-222ENST00000568034 C9orf64Q5T6V5 341 aa18.33■□□□□ 0.52
COMMD4-222ENST00000568034 Q6ZVU0 165 aa18.33■□□□□ 0.52
COMMD4-222ENST00000568034 VOPP1Q96AW1 172 aa18.33■□□□□ 0.52
COMMD4-222ENST00000568034 TRIM44Q96DX7 344 aaPredicted RBP18.33■□□□□ 0.52
COMMD4-222ENST00000568034 ERLEC1Q96DZ1 483 aa18.33■□□□□ 0.52
COMMD4-222ENST00000568034 LGMNQ99538 433 aa18.33■□□□□ 0.52
COMMD4-222ENST00000568034 CEP44Q9C0F1 390 aa18.33■□□□□ 0.52
COMMD4-222ENST00000568034 PRSS16Q9NQE7 514 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms