RNA–Protein interactions for RNA: ENST00000567445.1

CDH13-210, Transcript of cadherin 13, humanhuman

TSL 1 (best) BASIC

Gene CDH13, Length 1,456 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-210ENST00000567445 C11orf57Q6ZUT1 292 aaPredicted RBP9.45□□□□□ -0.9
CDH13-210ENST00000567445 PASD1Q8IV76 773 aa9.45□□□□□ -0.9
CDH13-210ENST00000567445 GALNT15Q8N3T1 639 aa9.45□□□□□ -0.9
CDH13-210ENST00000567445 OR14C36Q8NHC7 312 aa9.45□□□□□ -0.9
CDH13-210ENST00000567445 FRS2Q8WU20 508 aa9.45□□□□□ -0.9
CDH13-210ENST00000567445 SERAC1Q96JX3 654 aa9.45□□□□□ -0.9
CDH13-210ENST00000567445 RPRD1AQ96P16 312 aaPredicted RBP9.45□□□□□ -0.9
CDH13-210ENST00000567445 SPAG5Q96R06 1193 aa9.45□□□□□ -0.9
CDH13-210ENST00000567445 ELF4Q99607 663 aaPredicted RBP9.45□□□□□ -0.9
CDH13-210ENST00000567445 FEM1AQ9BSK4 669 aa9.45□□□□□ -0.9
CDH13-210ENST00000567445 ZFAND3Q9H8U3 227 aa9.45□□□□□ -0.9
CDH13-210ENST00000567445 FKBPLQ9UIM3 349 aa9.45□□□□□ -0.9
CDH13-210ENST00000567445 NYNRINQ9P2P1 1898 aaKnown RBP9.45□□□□□ -0.9
CDH13-210ENST00000567445 TP53BP1Q12888 1972 aaPredicted RBP9.44□□□□□ -0.9
CDH13-210ENST00000567445 CELSR3Q9NYQ7 3312 aa9.44□□□□□ -0.9
CDH13-210ENST00000567445 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.44□□□□□ -0.9
CDH13-210ENST00000567445 A0A1W2PR77 199 aa9.44□□□□□ -0.9
CDH13-210ENST00000567445 WNT9AO14904 365 aa9.44□□□□□ -0.9
CDH13-210ENST00000567445 YKT6O15498 198 aa9.44□□□□□ -0.9
CDH13-210ENST00000567445 LATO43561 262 aa9.44□□□□□ -0.9
CDH13-210ENST00000567445 GRAP2O75791 330 aa9.44□□□□□ -0.9
CDH13-210ENST00000567445 CD38P28907 300 aa9.44□□□□□ -0.9
CDH13-210ENST00000567445 DRD3P35462 400 aa9.44□□□□□ -0.9
CDH13-210ENST00000567445 KRT9P35527 623 aa9.44□□□□□ -0.9
CDH13-210ENST00000567445 MTIF2P46199 727 aaKnown RBP9.44□□□□□ -0.9
CDH13-210ENST00000567445 SLC6A3Q01959 620 aa9.44□□□□□ -0.9
CDH13-210ENST00000567445 NME3Q13232 169 aa9.44□□□□□ -0.9
CDH13-210ENST00000567445 ZNF177Q13360 481 aaPredicted RBP9.44□□□□□ -0.9
CDH13-210ENST00000567445 SLC45A4Q5BKX6 768 aa9.44□□□□□ -0.9
CDH13-210ENST00000567445 PRAMEF14Q5SWL7 426 aa9.44□□□□□ -0.9
CDH13-210ENST00000567445 OR6B2Q6IFH4 312 aa9.44□□□□□ -0.9
CDH13-210ENST00000567445 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.44□□□□□ -0.9
CDH13-210ENST00000567445 FAM183BPQ6ZVS7 135 aa9.44□□□□□ -0.9
CDH13-210ENST00000567445 SLC26A9Q7LBE3 791 aa9.44□□□□□ -0.9
CDH13-210ENST00000567445 DSG4Q86SJ6 1040 aa9.44□□□□□ -0.9
CDH13-210ENST00000567445 IRF2BP1Q8IU81 584 aa9.44□□□□□ -0.9
CDH13-210ENST00000567445 C1orf131Q8NDD1 294 aaKnown RBP9.44□□□□□ -0.9
CDH13-210ENST00000567445 OR8D1Q8WZ84 308 aa9.44□□□□□ -0.9
CDH13-210ENST00000567445 FAM131CQ96AQ9 280 aa9.44□□□□□ -0.9
CDH13-210ENST00000567445 ALG14Q96F25 216 aa9.44□□□□□ -0.9
CDH13-210ENST00000567445 SYNCQ9H7C4 482 aa9.44□□□□□ -0.9
CDH13-210ENST00000567445 FTSJ1Q9UET6 329 aa9.44□□□□□ -0.9
CDH13-210ENST00000567445 SLC25A13Q9UJS0 675 aa9.44□□□□□ -0.9
CDH13-210ENST00000567445 VANGL2Q9ULK5 521 aa9.44□□□□□ -0.9
CDH13-210ENST00000567445 GPSM3Q9Y4H4 160 aa9.44□□□□□ -0.9
CDH13-210ENST00000567445 URB1O60287 2271 aaKnown RBP9.43□□□□□ -0.9
CDH13-210ENST00000567445 NBEAQ8NFP9 2946 aa9.43□□□□□ -0.9
CDH13-210ENST00000567445 TBC1D3DA0A087WVF3 549 aa9.43□□□□□ -0.9
CDH13-210ENST00000567445 TBC1D3IA0A087WXS9 549 aa9.43□□□□□ -0.9
CDH13-210ENST00000567445 TBC1D3EA0A087X179 549 aa9.43□□□□□ -0.9
CDH13-210ENST00000567445 TBC1D3KA0A087X1G2 549 aa9.43□□□□□ -0.9
CDH13-210ENST00000567445 TBC1D3FA6NER0 549 aaPredicted RBP9.43□□□□□ -0.9
CDH13-210ENST00000567445 TBC1D3LB9A6J9 549 aa9.43□□□□□ -0.9
CDH13-210ENST00000567445 M0QYT0 321 aa9.43□□□□□ -0.9
CDH13-210ENST00000567445 ALOX15BO15296 676 aa9.43□□□□□ -0.9
CDH13-210ENST00000567445 SLC7A4O43246 635 aa9.43□□□□□ -0.9
CDH13-210ENST00000567445 RTN2O75298 545 aa9.43□□□□□ -0.9
CDH13-210ENST00000567445 PAGE1O75459 146 aa9.43□□□□□ -0.9
CDH13-210ENST00000567445 CLDN11O75508 207 aa9.43□□□□□ -0.9
CDH13-210ENST00000567445 DAB1O75553 588 aa9.43□□□□□ -0.9
CDH13-210ENST00000567445 ERBB2P04626 1255 aa9.43□□□□□ -0.9
CDH13-210ENST00000567445 TBC1D3HP0C7X1 549 aa9.43□□□□□ -0.9
CDH13-210ENST00000567445 NOS2P35228 1153 aa9.43□□□□□ -0.9
CDH13-210ENST00000567445 ARRB1P49407 418 aaPredicted RBP9.43□□□□□ -0.9
CDH13-210ENST00000567445 METAP1P53582 386 aa9.43□□□□□ -0.9
CDH13-210ENST00000567445 UBE2HP62256 183 aa9.43□□□□□ -0.9
CDH13-210ENST00000567445 PPP2CBP62714 309 aa9.43□□□□□ -0.9
CDH13-210ENST00000567445 PPP2CAP67775 309 aa9.43□□□□□ -0.9
CDH13-210ENST00000567445 SMAD1Q15797 465 aaKnown RBP9.43□□□□□ -0.9
CDH13-210ENST00000567445 C5orf22Q49AR2 442 aa9.43□□□□□ -0.9
CDH13-210ENST00000567445 ACCSLQ4AC99 568 aa9.43□□□□□ -0.9
CDH13-210ENST00000567445 PTPN20Q4JDL3 420 aa9.43□□□□□ -0.9
CDH13-210ENST00000567445 CCDC157Q569K6 752 aa9.43□□□□□ -0.9
CDH13-210ENST00000567445 FAM46CQ5VWP2 391 aa9.43□□□□□ -0.9
CDH13-210ENST00000567445 TBC1D3GQ6DHY5 549 aa9.43□□□□□ -0.9
CDH13-210ENST00000567445 TBC1D3CQ6IPX1 549 aa9.43□□□□□ -0.9
CDH13-210ENST00000567445 SLC47A2Q86VL8 602 aa9.43□□□□□ -0.9
CDH13-210ENST00000567445 GATAD2AQ86YP4 633 aa9.43□□□□□ -0.9
CDH13-210ENST00000567445 ZDHHC17Q8IUH5 632 aa9.43□□□□□ -0.9
CDH13-210ENST00000567445 TBC1D3Q8IZP1 549 aaPredicted RBP9.43□□□□□ -0.9
CDH13-210ENST00000567445 MLKLQ8NB16 471 aa9.43□□□□□ -0.9
CDH13-210ENST00000567445 ZNF397Q8NF99 534 aaPredicted RBP9.43□□□□□ -0.9
CDH13-210ENST00000567445 OR52K2Q8NGK3 314 aa9.43□□□□□ -0.9
CDH13-210ENST00000567445 MDM1Q8TC05 714 aa9.43□□□□□ -0.9
CDH13-210ENST00000567445 SAP25Q8TEE9 199 aa9.43□□□□□ -0.9
CDH13-210ENST00000567445 SIX2Q9NPC8 291 aa9.43□□□□□ -0.9
CDH13-210ENST00000567445 GDF3Q9NR23 364 aa9.43□□□□□ -0.9
CDH13-210ENST00000567445 RRN3Q9NYV6 651 aa9.43□□□□□ -0.9
CDH13-210ENST00000567445 DKK4Q9UBT3 224 aa9.43□□□□□ -0.9
CDH13-210ENST00000567445 VPS28Q9UK41 221 aa9.43□□□□□ -0.9
CDH13-210ENST00000567445 DNAJC12Q9UKB3 198 aa9.43□□□□□ -0.9
CDH13-210ENST00000567445 AJAP1Q9UKB5 411 aaPredicted RBP9.43□□□□□ -0.9
CDH13-210ENST00000567445 TBC1D30Q9Y2I9 924 aa9.43□□□□□ -0.9
CDH13-210ENST00000567445 OR51B4Q9Y5P0 310 aa9.43□□□□□ -0.9
CDH13-210ENST00000567445 HS3ST4Q9Y661 456 aa9.43□□□□□ -0.9
CDH13-210ENST00000567445 COL5A1P20908 1838 aaPredicted RBP9.43□□□□□ -0.9
CDH13-210ENST00000567445 ITPR1Q14643 2758 aa9.42□□□□□ -0.9
CDH13-210ENST00000567445 C1QTNF3-AMACRE9PGA6 284 aa9.42□□□□□ -0.9
CDH13-210ENST00000567445 TLR4O00206 839 aa9.42□□□□□ -0.9
CDH13-210ENST00000567445 FOXN3O00409 490 aaPredicted RBP9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms