RNA–Protein interactions for RNA: ENST00000567234.1

LINC00543-201, long intergenic non-protein coding RNA 543, humanhuman

BASIC

Gene LINC00543, Length 1,845 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00543-201ENST00000567234 LPXNO60711 386 aa23.72■■□□□ 1.39
LINC00543-201ENST00000567234 POLBP06746 335 aa23.72■■□□□ 1.39
LINC00543-201ENST00000567234 CSH1P0DML2 217 aa23.72■■□□□ 1.39
LINC00543-201ENST00000567234 CSH2P0DML3 217 aa23.72■■□□□ 1.39
LINC00543-201ENST00000567234 ABL2P42684 1182 aa23.72■■□□□ 1.39
LINC00543-201ENST00000567234 NPY2RP49146 381 aa23.72■■□□□ 1.39
LINC00543-201ENST00000567234 NEK3P51956 506 aa23.72■■□□□ 1.39
LINC00543-201ENST00000567234 DNAJC3Q13217 504 aa23.72■■□□□ 1.39
LINC00543-201ENST00000567234 STKLD1Q8NE28 680 aa23.72■■□□□ 1.39
LINC00543-201ENST00000567234 VWCEQ96DN2 955 aa23.72■■□□□ 1.39
LINC00543-201ENST00000567234 IL12RB2Q99665 862 aa23.72■■□□□ 1.39
LINC00543-201ENST00000567234 PRDM5Q9NQX1 630 aaPredicted RBP23.72■■□□□ 1.39
LINC00543-201ENST00000567234 SYBUQ9NX95 663 aa23.72■■□□□ 1.39
LINC00543-201ENST00000567234 MAGEB16A2A368 324 aa23.71■■□□□ 1.39
LINC00543-201ENST00000567234 TRIM43BA6NCK2 446 aa23.71■■□□□ 1.39
LINC00543-201ENST00000567234 DFFAO00273 331 aa23.71■■□□□ 1.39
LINC00543-201ENST00000567234 MATN3O15232 486 aa23.71■■□□□ 1.39
LINC00543-201ENST00000567234 MAFKO60675 156 aa23.71■■□□□ 1.39
LINC00543-201ENST00000567234 CCNFP41002 786 aa23.71■■□□□ 1.39
LINC00543-201ENST00000567234 ALDH7A1P49419 539 aaKnown RBP23.71■■□□□ 1.39
LINC00543-201ENST00000567234 NIPAL4Q0D2K0 466 aa23.71■■□□□ 1.39
LINC00543-201ENST00000567234 TAF10Q12962 218 aa23.71■■□□□ 1.39
LINC00543-201ENST00000567234 SLC5A9Q2M3M2 681 aa23.71■■□□□ 1.39
LINC00543-201ENST00000567234 PIK3R6Q5UE93 754 aa23.71■■□□□ 1.39
LINC00543-201ENST00000567234 TIFABQ6ZNK6 161 aa23.71■■□□□ 1.39
LINC00543-201ENST00000567234 LINC00523Q86TU6 105 aa23.71■■□□□ 1.39
LINC00543-201ENST00000567234 ZNF683Q8IZ20 524 aa23.71■■□□□ 1.39
LINC00543-201ENST00000567234 FITM2Q8N6M3 262 aa23.71■■□□□ 1.39
LINC00543-201ENST00000567234 OR52K1Q8NGK4 314 aa23.71■■□□□ 1.39
LINC00543-201ENST00000567234 LRRC8CQ8TDW0 803 aa23.71■■□□□ 1.39
LINC00543-201ENST00000567234 TRIM43Q96BQ3 446 aaPredicted RBP23.71■■□□□ 1.39
LINC00543-201ENST00000567234 TRAPPC9Q96Q05 1148 aa23.71■■□□□ 1.39
LINC00543-201ENST00000567234 SEPT5Q99719 369 aaPredicted RBP23.71■■□□□ 1.39
LINC00543-201ENST00000567234 MLPHQ9BV36 600 aaPredicted RBP23.71■■□□□ 1.39
LINC00543-201ENST00000567234 PITPNM3Q9BZ71 974 aa23.71■■□□□ 1.39
LINC00543-201ENST00000567234 SLC39A8Q9C0K1 460 aa23.71■■□□□ 1.39
LINC00543-201ENST00000567234 GRID1Q9ULK0 1009 aa23.71■■□□□ 1.39
LINC00543-201ENST00000567234 VANGL2Q9ULK5 521 aa23.71■■□□□ 1.39
LINC00543-201ENST00000567234 SLC27A5Q9Y2P5 690 aa23.71■■□□□ 1.39
LINC00543-201ENST00000567234 AAR2Q9Y312 384 aaKnown RBP23.71■■□□□ 1.39
LINC00543-201ENST00000567234 NYNRINQ9P2P1 1898 aaKnown RBP23.71■■□□□ 1.39
LINC00543-201ENST00000567234 GOLGA8RI6L899 631 aa23.7■■□□□ 1.39
LINC00543-201ENST00000567234 MOCS2O96007 188 aaPredicted RBP23.7■■□□□ 1.39
LINC00543-201ENST00000567234 ZDHHC11BP0C7U3 371 aa23.7■■□□□ 1.39
LINC00543-201ENST00000567234 PYGBP11216 843 aa23.7■■□□□ 1.39
LINC00543-201ENST00000567234 RING1Q06587 406 aa23.7■■□□□ 1.39
LINC00543-201ENST00000567234 USP41Q3LFD5 358 aa23.7■■□□□ 1.39
LINC00543-201ENST00000567234 NAPEPLDQ6IQ20 393 aa23.7■■□□□ 1.39
LINC00543-201ENST00000567234 SLC8B1Q6J4K2 584 aa23.7■■□□□ 1.39
LINC00543-201ENST00000567234 IRGCQ6NXR0 463 aa23.7■■□□□ 1.39
LINC00543-201ENST00000567234 C14orf80Q86SX3 495 aa23.7■■□□□ 1.39
LINC00543-201ENST00000567234 TMEM173Q86WV6 379 aaPredicted RBP23.7■■□□□ 1.39
LINC00543-201ENST00000567234 ZNF276Q8N554 614 aa23.7■■□□□ 1.39
LINC00543-201ENST00000567234 CNTD1Q8N815 330 aa23.7■■□□□ 1.39
LINC00543-201ENST00000567234 BCL7CQ8WUZ0 217 aaPredicted RBP23.7■■□□□ 1.39
LINC00543-201ENST00000567234 FATE1Q969F0 183 aa23.7■■□□□ 1.39
LINC00543-201ENST00000567234 BTN2A3PQ96KV6 586 aa23.7■■□□□ 1.39
LINC00543-201ENST00000567234 TRIM56Q9BRZ2 755 aaKnown RBP23.7■■□□□ 1.39
LINC00543-201ENST00000567234 CCDC28BQ9BUN5 200 aa23.7■■□□□ 1.39
LINC00543-201ENST00000567234 TTLL2Q9BWV7 592 aa23.7■■□□□ 1.39
LINC00543-201ENST00000567234 CRISPLD1Q9H336 500 aa23.7■■□□□ 1.39
LINC00543-201ENST00000567234 PAPOLBQ9NRJ5 636 aaKnown RBP23.7■■□□□ 1.39
LINC00543-201ENST00000567234 MTRRQ9UBK8 725 aa23.7■■□□□ 1.39
LINC00543-201ENST00000567234 STARD13Q9Y3M8 1113 aa23.7■■□□□ 1.39
LINC00543-201ENST00000567234 BACE2Q9Y5Z0 518 aa23.7■■□□□ 1.39
LINC00543-201ENST00000567234 DCTN3O75935 186 aa23.7■■□□□ 1.38
LINC00543-201ENST00000567234 IGLV3-27P01718 113 aa23.7■■□□□ 1.38
LINC00543-201ENST00000567234 DHRS4L1P0CG22 281 aa23.7■■□□□ 1.38
LINC00543-201ENST00000567234 RHOQP17081 205 aa23.7■■□□□ 1.38
LINC00543-201ENST00000567234 KPNA1P52294 538 aaPredicted RBP23.7■■□□□ 1.38
LINC00543-201ENST00000567234 NDST2P52849 883 aa23.7■■□□□ 1.38
LINC00543-201ENST00000567234 CRADDP78560 199 aa23.7■■□□□ 1.38
LINC00543-201ENST00000567234 KLC1Q07866 573 aa23.7■■□□□ 1.38
LINC00543-201ENST00000567234 EFEMP1Q12805 493 aa23.7■■□□□ 1.38
LINC00543-201ENST00000567234 IKBKEQ14164 716 aa23.7■■□□□ 1.38
LINC00543-201ENST00000567234 TAS1R1Q7RTX1 841 aa23.7■■□□□ 1.38
LINC00543-201ENST00000567234 UBE2Q1Q7Z7E8 422 aa23.7■■□□□ 1.38
LINC00543-201ENST00000567234 UMODL1-AS1Q8N2C9 162 aa23.7■■□□□ 1.38
LINC00543-201ENST00000567234 FBXO22Q8NEZ5 403 aa23.7■■□□□ 1.38
LINC00543-201ENST00000567234 DTNBP1Q96EV8 351 aa23.7■■□□□ 1.38
LINC00543-201ENST00000567234 FCRL5Q96RD9 977 aa23.7■■□□□ 1.38
LINC00543-201ENST00000567234 MARCH2Q9P0N8 246 aa23.7■■□□□ 1.38
LINC00543-201ENST00000567234 IGLV3-10A0A075B6K4 115 aa23.69■■□□□ 1.38
LINC00543-201ENST00000567234 ANXA9O76027 345 aa23.69■■□□□ 1.38
LINC00543-201ENST00000567234 RPS6KA3P51812 740 aa23.69■■□□□ 1.38
LINC00543-201ENST00000567234 MGAT5Q09328 741 aa23.69■■□□□ 1.38
LINC00543-201ENST00000567234 DUSP4Q13115 394 aa23.69■■□□□ 1.38
LINC00543-201ENST00000567234 ZRSR2Q15696 482 aaKnown RBP23.69■■□□□ 1.38
LINC00543-201ENST00000567234 CNKSR3Q6P9H4 555 aa23.69■■□□□ 1.38
LINC00543-201ENST00000567234 TMEM135Q86UB9 458 aa23.69■■□□□ 1.38
LINC00543-201ENST00000567234 RNF168Q8IYW5 571 aaPredicted RBP23.69■■□□□ 1.38
LINC00543-201ENST00000567234 GPR152Q8TDT2 470 aa23.69■■□□□ 1.38
LINC00543-201ENST00000567234 CDK5RAP1Q96SZ6 601 aaKnown RBP23.69■■□□□ 1.38
LINC00543-201ENST00000567234 KLF6Q99612 283 aaPredicted RBP23.69■■□□□ 1.38
LINC00543-201ENST00000567234 UBE2OQ9C0C9 1292 aaKnown RBP23.69■■□□□ 1.38
LINC00543-201ENST00000567234 UGT1A9O60656 530 aa23.68■■□□□ 1.38
LINC00543-201ENST00000567234 RFPL1O75677 317 aa23.68■■□□□ 1.38
LINC00543-201ENST00000567234 SOAT2O75908 522 aa23.68■■□□□ 1.38
LINC00543-201ENST00000567234 ADRA1DP25100 572 aa23.68■■□□□ 1.38
LINC00543-201ENST00000567234 PBX3P40426 434 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms