RNA–Protein interactions for RNA: ENST00000566633.1

PDXDC1-214, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 2

Gene PDXDC1, Length 2,597 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-214ENST00000566633 PTPN4P29074 926 aa11.03□□□□□ -0.64
PDXDC1-214ENST00000566633 SERPINB3P29508 390 aa11.03□□□□□ -0.64
PDXDC1-214ENST00000566633 TPI1P60174 286 aa11.03□□□□□ -0.64
PDXDC1-214ENST00000566633 EIF4EBP2Q13542 120 aaPredicted RBP11.03□□□□□ -0.64
PDXDC1-214ENST00000566633 CRYMQ14894 314 aa11.03□□□□□ -0.64
PDXDC1-214ENST00000566633 C10orf120Q5SQS8 335 aa11.03□□□□□ -0.64
PDXDC1-214ENST00000566633 ATG16L1Q676U5 607 aa11.03□□□□□ -0.64
PDXDC1-214ENST00000566633 PID1Q7Z2X4 250 aa11.03□□□□□ -0.64
PDXDC1-214ENST00000566633 NUDCD3Q8IVD9 361 aa11.03□□□□□ -0.64
PDXDC1-214ENST00000566633 TTC16Q8NEE8 873 aa11.03□□□□□ -0.64
PDXDC1-214ENST00000566633 CELF6Q96J87 481 aaKnown RBP11.03□□□□□ -0.64
PDXDC1-214ENST00000566633 NAT9Q9BTE0 207 aa11.03□□□□□ -0.64
PDXDC1-214ENST00000566633 TLE6Q9H808 572 aa11.03□□□□□ -0.64
PDXDC1-214ENST00000566633 BACE2Q9Y5Z0 518 aa11.03□□□□□ -0.64
PDXDC1-214ENST00000566633 RAD54BQ9Y620 910 aa11.03□□□□□ -0.64
PDXDC1-214ENST00000566633 CEP290O15078 2479 aa11.02□□□□□ -0.64
PDXDC1-214ENST00000566633 FAM237BA0A1B0GVD1 139 aa11.02□□□□□ -0.65
PDXDC1-214ENST00000566633 KCNK1O00180 336 aa11.02□□□□□ -0.65
PDXDC1-214ENST00000566633 BIRC5O15392 142 aa11.02□□□□□ -0.65
PDXDC1-214ENST00000566633 TLL1O43897 1013 aa11.02□□□□□ -0.65
PDXDC1-214ENST00000566633 HNRNPCL1O60812 293 aaKnown RBP11.02□□□□□ -0.65
PDXDC1-214ENST00000566633 PAGE1O75459 146 aa11.02□□□□□ -0.65
PDXDC1-214ENST00000566633 WFS1O76024 890 aa11.02□□□□□ -0.65
PDXDC1-214ENST00000566633 ARHGEF15O94989 841 aa11.02□□□□□ -0.65
PDXDC1-214ENST00000566633 BPGMP07738 259 aa11.02□□□□□ -0.65
PDXDC1-214ENST00000566633 MYL2P10916 166 aa11.02□□□□□ -0.65
PDXDC1-214ENST00000566633 TMPRSS15P98073 1019 aa11.02□□□□□ -0.65
PDXDC1-214ENST00000566633 OCRLQ01968 901 aa11.02□□□□□ -0.65
PDXDC1-214ENST00000566633 TEX44Q53QW1 395 aa11.02□□□□□ -0.65
PDXDC1-214ENST00000566633 STXBP5Q5T5C0 1151 aa11.02□□□□□ -0.65
PDXDC1-214ENST00000566633 FAM109BQ6ICB4 259 aaPredicted RBP11.02□□□□□ -0.65
PDXDC1-214ENST00000566633 PDZD4Q76G19 769 aaPredicted RBP11.02□□□□□ -0.65
PDXDC1-214ENST00000566633 C14orf80Q86SX3 495 aa11.02□□□□□ -0.65
PDXDC1-214ENST00000566633 LONP2Q86WA8 852 aa11.02□□□□□ -0.65
PDXDC1-214ENST00000566633 SCML4Q8N228 414 aa11.02□□□□□ -0.65
PDXDC1-214ENST00000566633 NPWQ8N729 165 aa11.02□□□□□ -0.65
PDXDC1-214ENST00000566633 ZNF512Q96ME7 567 aaPredicted RBP11.02□□□□□ -0.65
PDXDC1-214ENST00000566633 TUBB6Q9BUF5 446 aa11.02□□□□□ -0.65
PDXDC1-214ENST00000566633 SMOC2Q9H3U7 446 aa11.02□□□□□ -0.65
PDXDC1-214ENST00000566633 EBF2Q9HAK2 575 aa11.02□□□□□ -0.65
PDXDC1-214ENST00000566633 MRPL17Q9NRX2 175 aaKnown RBP11.02□□□□□ -0.65
PDXDC1-214ENST00000566633 SYBUQ9NX95 663 aa11.02□□□□□ -0.65
PDXDC1-214ENST00000566633 SLC17A6Q9P2U8 582 aa11.02□□□□□ -0.65
PDXDC1-214ENST00000566633 PCDHB12Q9Y5F1 795 aa11.02□□□□□ -0.65
PDXDC1-214ENST00000566633 C5orf42Q9H799 3197 aa11.02□□□□□ -0.65
PDXDC1-214ENST00000566633 CHD9Q3L8U1 2897 aa11.02□□□□□ -0.65
PDXDC1-214ENST00000566633 SCAMP3O14828 347 aaKnown RBP11.02□□□□□ -0.65
PDXDC1-214ENST00000566633 ABLIM3O94929 683 aa11.02□□□□□ -0.65
PDXDC1-214ENST00000566633 ALDOAP04075 364 aaKnown RBP11.02□□□□□ -0.65
PDXDC1-214ENST00000566633 PTPN3P26045 913 aa11.02□□□□□ -0.65
PDXDC1-214ENST00000566633 CCR1P32246 355 aa11.02□□□□□ -0.65
PDXDC1-214ENST00000566633 CHI3L2Q15782 390 aa11.02□□□□□ -0.65
PDXDC1-214ENST00000566633 HSF5Q4G112 596 aaPredicted RBP11.02□□□□□ -0.65
PDXDC1-214ENST00000566633 PACS1Q6VY07 963 aa11.02□□□□□ -0.65
PDXDC1-214ENST00000566633 TMC7Q7Z402 723 aa11.02□□□□□ -0.65
PDXDC1-214ENST00000566633 DDX53Q86TM3 631 aaKnown RBP11.02□□□□□ -0.65
PDXDC1-214ENST00000566633 FAM13CQ8NE31 585 aa11.02□□□□□ -0.65
PDXDC1-214ENST00000566633 RAB3IL1Q8TBN0 382 aa11.02□□□□□ -0.65
PDXDC1-214ENST00000566633 ACMSDQ8TDX5 336 aa11.02□□□□□ -0.65
PDXDC1-214ENST00000566633 CDKL2Q92772 493 aa11.02□□□□□ -0.65
PDXDC1-214ENST00000566633 DPF3Q92784 378 aa11.02□□□□□ -0.65
PDXDC1-214ENST00000566633 PTCD3Q96EY7 689 aaKnown RBP11.02□□□□□ -0.65
PDXDC1-214ENST00000566633 FCRL2Q96LA5 508 aaPredicted RBP11.02□□□□□ -0.65
PDXDC1-214ENST00000566633 GORASP1Q9BQQ3 440 aa11.02□□□□□ -0.65
PDXDC1-214ENST00000566633 FBXO6Q9NRD1 293 aaPredicted RBP11.02□□□□□ -0.65
PDXDC1-214ENST00000566633 NDFIP2Q9NV92 336 aa11.02□□□□□ -0.65
PDXDC1-214ENST00000566633 ARL8BQ9NVJ2 186 aa11.02□□□□□ -0.65
PDXDC1-214ENST00000566633 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.02□□□□□ -0.65
PDXDC1-214ENST00000566633 IL37Q9NZH6 218 aa11.02□□□□□ -0.65
PDXDC1-214ENST00000566633 MPP6Q9NZW5 540 aa11.02□□□□□ -0.65
PDXDC1-214ENST00000566633 AFF4Q9UHB7 1163 aaKnown RBP11.02□□□□□ -0.65
PDXDC1-214ENST00000566633 SLC4A7Q9Y6M7 1214 aa11.02□□□□□ -0.65
PDXDC1-214ENST00000566633 PTPRDP23468 1912 aa11.01□□□□□ -0.65
PDXDC1-214ENST00000566633 C2orf71A6NGG8 1288 aa11.01□□□□□ -0.65
PDXDC1-214ENST00000566633 PRRG1O14668 218 aa11.01□□□□□ -0.65
PDXDC1-214ENST00000566633 NCAM2O15394 837 aa11.01□□□□□ -0.65
PDXDC1-214ENST00000566633 TLR5O60602 858 aa11.01□□□□□ -0.65
PDXDC1-214ENST00000566633 SNNO75324 88 aaPredicted RBP11.01□□□□□ -0.65
PDXDC1-214ENST00000566633 ZNF189O75820 626 aaPredicted RBP11.01□□□□□ -0.65
PDXDC1-214ENST00000566633 HAUS5O94927 633 aa11.01□□□□□ -0.65
PDXDC1-214ENST00000566633 TOP3BO95985 862 aaKnown RBP11.01□□□□□ -0.65
PDXDC1-214ENST00000566633 GSRP00390 522 aa11.01□□□□□ -0.65
PDXDC1-214ENST00000566633 CNPP09543 421 aaKnown RBP11.01□□□□□ -0.65
PDXDC1-214ENST00000566633 ERVFC1P60507 584 aa11.01□□□□□ -0.65
PDXDC1-214ENST00000566633 RPL10AP62906 217 aaKnown RBP11.01□□□□□ -0.65
PDXDC1-214ENST00000566633 PPIDQ08752 370 aaKnown RBP11.01□□□□□ -0.65
PDXDC1-214ENST00000566633 TWF1Q12792 350 aa11.01□□□□□ -0.65
PDXDC1-214ENST00000566633 PLD1Q13393 1074 aa11.01□□□□□ -0.65
PDXDC1-214ENST00000566633 NAB1Q13506 487 aa11.01□□□□□ -0.65
PDXDC1-214ENST00000566633 KYAT3Q6YP21 454 aaKnown RBP11.01□□□□□ -0.65
PDXDC1-214ENST00000566633 FAM43BQ6ZT52 329 aaPredicted RBP11.01□□□□□ -0.65
PDXDC1-214ENST00000566633 HERC6Q8IVU3 1022 aa11.01□□□□□ -0.65
PDXDC1-214ENST00000566633 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.01□□□□□ -0.65
PDXDC1-214ENST00000566633 PRR11Q96HE9 360 aaPredicted RBP11.01□□□□□ -0.65
PDXDC1-214ENST00000566633 ZNF395Q9H8N7 513 aaPredicted RBP11.01□□□□□ -0.65
PDXDC1-214ENST00000566633 TLR8Q9NR97 1041 aaKnown RBP11.01□□□□□ -0.65
PDXDC1-214ENST00000566633 KCNK4Q9NYG8 393 aa11.01□□□□□ -0.65
PDXDC1-214ENST00000566633 RRN3Q9NYV6 651 aa11.01□□□□□ -0.65
PDXDC1-214ENST00000566633 INSL6Q9Y581 213 aa11.01□□□□□ -0.65
PDXDC1-214ENST00000566633 PSAT1Q9Y617 370 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms