RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 ZBTB8AQ96BR9 441 aa3.49□□□□□ -1.85
HERPUD1-211ENST00000566550 ELMOD3Q96FG2 381 aa3.49□□□□□ -1.85
HERPUD1-211ENST00000566550 NUDT11Q96G61 164 aa3.49□□□□□ -1.85
HERPUD1-211ENST00000566550 ZDHHC12Q96GR4 267 aa3.49□□□□□ -1.85
HERPUD1-211ENST00000566550 MARS2Q96GW9 593 aaKnown RBP3.49□□□□□ -1.85
HERPUD1-211ENST00000566550 PPP1R13BQ96KQ4 1090 aa3.49□□□□□ -1.85
HERPUD1-211ENST00000566550 TSGA13Q96PP4 275 aa3.49□□□□□ -1.85
HERPUD1-211ENST00000566550 C17orf80Q9BSJ5 609 aa3.49□□□□□ -1.85
HERPUD1-211ENST00000566550 DPCDQ9BVM2 203 aaPredicted RBP3.49□□□□□ -1.85
HERPUD1-211ENST00000566550 OR10A2Q9H208 303 aa3.49□□□□□ -1.85
HERPUD1-211ENST00000566550 SLC6A15Q9H2J7 730 aa3.49□□□□□ -1.85
HERPUD1-211ENST00000566550 NRDE2Q9H7Z3 1164 aa3.49□□□□□ -1.85
HERPUD1-211ENST00000566550 IL23AQ9NPF7 189 aa3.49□□□□□ -1.85
HERPUD1-211ENST00000566550 SPATS2LQ9NUQ6 558 aaKnown RBP3.49□□□□□ -1.85
HERPUD1-211ENST00000566550 CHCHD3Q9NX63 227 aaKnown RBP3.49□□□□□ -1.85
HERPUD1-211ENST00000566550 DCAF16Q9NXF7 216 aa3.49□□□□□ -1.85
HERPUD1-211ENST00000566550 CACNG4Q9UBN1 327 aa3.49□□□□□ -1.85
HERPUD1-211ENST00000566550 CTNNAL1Q9UBT7 734 aa3.49□□□□□ -1.85
HERPUD1-211ENST00000566550 CD207Q9UJ71 328 aa3.49□□□□□ -1.85
HERPUD1-211ENST00000566550 HOOK1Q9UJC3 728 aaKnown RBP3.49□□□□□ -1.85
HERPUD1-211ENST00000566550 SLC25A13Q9UJS0 675 aa3.49□□□□□ -1.85
HERPUD1-211ENST00000566550 CPSF3Q9UKF6 684 aaKnown RBP3.49□□□□□ -1.85
HERPUD1-211ENST00000566550 PADI1Q9ULC6 663 aa3.49□□□□□ -1.85
HERPUD1-211ENST00000566550 VPS4AQ9UN37 437 aa3.49□□□□□ -1.85
HERPUD1-211ENST00000566550 ZBTB32Q9Y2Y4 487 aaPredicted RBP3.49□□□□□ -1.85
HERPUD1-211ENST00000566550 NACADO15069 1562 aa3.49□□□□□ -1.85
HERPUD1-211ENST00000566550 THOC2Q8NI27 1593 aaKnown RBP3.49□□□□□ -1.85
HERPUD1-211ENST00000566550 CCDC195A0A1B0GUA6 201 aa3.48□□□□□ -1.85
HERPUD1-211ENST00000566550 GXYLT2A0PJZ3 443 aa3.48□□□□□ -1.85
HERPUD1-211ENST00000566550 A8MZ25 164 aa3.48□□□□□ -1.85
HERPUD1-211ENST00000566550 C1QTNF3-AMACRE9PGA6 284 aa3.48□□□□□ -1.85
HERPUD1-211ENST00000566550 IFNL4K9M1U5 179 aa3.48□□□□□ -1.85
HERPUD1-211ENST00000566550 ZNF213O14771 459 aa3.48□□□□□ -1.85
HERPUD1-211ENST00000566550 CAPN9O14815 690 aa3.48□□□□□ -1.85
HERPUD1-211ENST00000566550 ZNF263O14978 683 aa3.48□□□□□ -1.85
HERPUD1-211ENST00000566550 TRIM24O15164 1050 aa3.48□□□□□ -1.85
HERPUD1-211ENST00000566550 CEP104O60308 925 aa3.48□□□□□ -1.85
HERPUD1-211ENST00000566550 RECQL4O94761 1208 aa3.48□□□□□ -1.85
HERPUD1-211ENST00000566550 SLCO2B1O94956 709 aa3.48□□□□□ -1.85
HERPUD1-211ENST00000566550 REC8O95072 547 aa3.48□□□□□ -1.85
HERPUD1-211ENST00000566550 CSF1RP07333 972 aa3.48□□□□□ -1.85
HERPUD1-211ENST00000566550 GALTP07902 379 aa3.48□□□□□ -1.85
HERPUD1-211ENST00000566550 DLDP09622 509 aaKnown RBP3.48□□□□□ -1.85
HERPUD1-211ENST00000566550 C1SP09871 688 aa3.48□□□□□ -1.85
HERPUD1-211ENST00000566550 CDH2P19022 906 aaPredicted RBP3.48□□□□□ -1.85
HERPUD1-211ENST00000566550 POU1F1P28069 291 aa3.48□□□□□ -1.85
HERPUD1-211ENST00000566550 FMO4P31512 558 aa3.48□□□□□ -1.85
HERPUD1-211ENST00000566550 KRT2P35908 639 aa3.48□□□□□ -1.85
HERPUD1-211ENST00000566550 CPOXP36551 454 aa3.48□□□□□ -1.85
HERPUD1-211ENST00000566550 BMPR1AP36894 532 aa3.48□□□□□ -1.85
HERPUD1-211ENST00000566550 NT5C2P49902 561 aa3.48□□□□□ -1.85
HERPUD1-211ENST00000566550 CAPZA1P52907 286 aa3.48□□□□□ -1.85
HERPUD1-211ENST00000566550 LIMK1P53667 647 aa3.48□□□□□ -1.85
HERPUD1-211ENST00000566550 PMS2P54278 862 aa3.48□□□□□ -1.85
HERPUD1-211ENST00000566550 CSE1LP55060 971 aaKnown RBP3.48□□□□□ -1.85
HERPUD1-211ENST00000566550 F2RL1P55085 397 aa3.48□□□□□ -1.85
HERPUD1-211ENST00000566550 KLHL30Q0D2K2 578 aa3.48□□□□□ -1.85
HERPUD1-211ENST00000566550 ABHD18Q0P651 414 aa3.48□□□□□ -1.85
HERPUD1-211ENST00000566550 RPA4Q13156 261 aa3.48□□□□□ -1.85
HERPUD1-211ENST00000566550 BYSLQ13895 437 aaKnown RBP3.48□□□□□ -1.85
HERPUD1-211ENST00000566550 IL13RA2Q14627 380 aa3.48□□□□□ -1.85
HERPUD1-211ENST00000566550 LASP1Q14847 261 aaKnown RBP3.48□□□□□ -1.85
HERPUD1-211ENST00000566550 ACOX1Q15067 660 aa3.48□□□□□ -1.85
HERPUD1-211ENST00000566550 ASTE1Q2TB18 679 aaPredicted RBP3.48□□□□□ -1.85
HERPUD1-211ENST00000566550 DCAF17Q5H9S7 520 aaPredicted RBP3.48□□□□□ -1.85
HERPUD1-211ENST00000566550 FAM171A1Q5VUB5 890 aa3.48□□□□□ -1.85
HERPUD1-211ENST00000566550 EFCAB12Q6NXP0 572 aa3.48□□□□□ -1.85
HERPUD1-211ENST00000566550 TICAM1Q8IUC6 712 aa3.48□□□□□ -1.85
HERPUD1-211ENST00000566550 WDR63Q8IWG1 891 aa3.48□□□□□ -1.85
HERPUD1-211ENST00000566550 SAMD14Q8IZD0 417 aaPredicted RBP3.48□□□□□ -1.85
HERPUD1-211ENST00000566550 FAM185AQ8N0U4 392 aa3.48□□□□□ -1.85
HERPUD1-211ENST00000566550 SUPT20HQ8NEM7 779 aa3.48□□□□□ -1.85
HERPUD1-211ENST00000566550 FIBINQ8TAL6 211 aa3.48□□□□□ -1.85
HERPUD1-211ENST00000566550 OSCP1Q8WVF1 389 aa3.48□□□□□ -1.85
HERPUD1-211ENST00000566550 RAB40AQ8WXH6 277 aa3.48□□□□□ -1.85
HERPUD1-211ENST00000566550 CPA5Q8WXQ8 436 aa3.48□□□□□ -1.85
HERPUD1-211ENST00000566550 ST8SIA2Q92186 375 aa3.48□□□□□ -1.85
HERPUD1-211ENST00000566550 MR1Q95460 341 aa3.48□□□□□ -1.85
HERPUD1-211ENST00000566550 PTERQ96BW5 349 aa3.48□□□□□ -1.85
HERPUD1-211ENST00000566550 MIEF2Q96C03 454 aa3.48□□□□□ -1.85
HERPUD1-211ENST00000566550 TMCO6Q96DC7 493 aa3.48□□□□□ -1.85
HERPUD1-211ENST00000566550 LRIG1Q96JA1 1093 aa3.48□□□□□ -1.85
HERPUD1-211ENST00000566550 C16orf45Q96MC5 204 aaPredicted RBP3.48□□□□□ -1.85
HERPUD1-211ENST00000566550 DACH2Q96NX9 599 aa3.48□□□□□ -1.85
HERPUD1-211ENST00000566550 GPHA2Q96T91 129 aa3.48□□□□□ -1.85
HERPUD1-211ENST00000566550 AGAP2Q99490 1192 aa3.48□□□□□ -1.85
HERPUD1-211ENST00000566550 FERMT1Q9BQL6 677 aa3.48□□□□□ -1.85
HERPUD1-211ENST00000566550 CLSTN3Q9BQT9 956 aa3.48□□□□□ -1.85
HERPUD1-211ENST00000566550 PAAF1Q9BRP4 392 aa3.48□□□□□ -1.85
HERPUD1-211ENST00000566550 C11orf84Q9BUA3 381 aaPredicted RBP3.48□□□□□ -1.85
HERPUD1-211ENST00000566550 PTDSS2Q9BVG9 487 aa3.48□□□□□ -1.85
HERPUD1-211ENST00000566550 IFIH1Q9BYX4 1025 aaKnown RBP3.48□□□□□ -1.85
HERPUD1-211ENST00000566550 TRIM31Q9BZY9 425 aa3.48□□□□□ -1.85
HERPUD1-211ENST00000566550 KRT23Q9C075 422 aa3.48□□□□□ -1.85
HERPUD1-211ENST00000566550 IKZF4Q9H2S9 585 aa3.48□□□□□ -1.85
HERPUD1-211ENST00000566550 SLITRK6Q9H5Y7 841 aa3.48□□□□□ -1.85
HERPUD1-211ENST00000566550 MID1IP1Q9NPA3 183 aa3.48□□□□□ -1.85
HERPUD1-211ENST00000566550 NRIP3Q9NQ35 241 aa3.48□□□□□ -1.85
HERPUD1-211ENST00000566550 C20orf141Q9NUB4 165 aa3.48□□□□□ -1.85
HERPUD1-211ENST00000566550 INTS10Q9NVR2 710 aaKnown RBP3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms