RNA–Protein interactions for RNA: ENST00000565834.1

COMMD4-213, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,671 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-213ENST00000565834 MARC1Q5VT66 337 aa19.12■□□□□ 0.65
COMMD4-213ENST00000565834 ANKRD22Q5VYY1 191 aa19.12■□□□□ 0.65
COMMD4-213ENST00000565834 TANGO2Q6ICL3 276 aa19.12■□□□□ 0.65
COMMD4-213ENST00000565834 NAT8LQ8N9F0 302 aa19.12■□□□□ 0.65
COMMD4-213ENST00000565834 FIBINQ8TAL6 211 aa19.12■□□□□ 0.65
COMMD4-213ENST00000565834 PRCCQ92733 491 aaPredicted RBP19.12■□□□□ 0.65
COMMD4-213ENST00000565834 CAVIN3Q969G5 261 aa19.12■□□□□ 0.65
COMMD4-213ENST00000565834 GDAP1L1Q96MZ0 367 aa19.12■□□□□ 0.65
COMMD4-213ENST00000565834 ZNF599Q96NL3 588 aa19.12■□□□□ 0.65
COMMD4-213ENST00000565834 FEM1AQ9BSK4 669 aa19.12■□□□□ 0.65
COMMD4-213ENST00000565834 GBA3Q9H227 469 aa19.12■□□□□ 0.65
COMMD4-213ENST00000565834 RBM22Q9NW64 420 aaKnown RBP eCLIP19.12■□□□□ 0.65
COMMD4-213ENST00000565834 THG1LQ9NWX6 298 aaKnown RBP19.12■□□□□ 0.65
COMMD4-213ENST00000565834 MARK1Q9P0L2 795 aa19.12■□□□□ 0.65
COMMD4-213ENST00000565834 RSPH14Q9UHP6 348 aa19.12■□□□□ 0.65
COMMD4-213ENST00000565834 VPS28Q9UK41 221 aa19.12■□□□□ 0.65
COMMD4-213ENST00000565834 C5orf42Q9H799 3197 aa19.12■□□□□ 0.65
COMMD4-213ENST00000565834 E7EVH7 732 aa19.11■□□□□ 0.65
COMMD4-213ENST00000565834 F5H423 210 aaPredicted RBP19.11■□□□□ 0.65
COMMD4-213ENST00000565834 CBX4O00257 560 aa19.11■□□□□ 0.65
COMMD4-213ENST00000565834 TYRP14679 529 aa19.11■□□□□ 0.65
COMMD4-213ENST00000565834 TNNT3P45378 269 aaPredicted RBP19.11■□□□□ 0.65
COMMD4-213ENST00000565834 SEMA5AQ13591 1074 aa19.11■□□□□ 0.65
COMMD4-213ENST00000565834 EML3Q32P44 896 aa19.11■□□□□ 0.65
COMMD4-213ENST00000565834 TMCO4Q5TGY1 634 aa19.11■□□□□ 0.65
COMMD4-213ENST00000565834 CNTD1Q8N815 330 aa19.11■□□□□ 0.65
COMMD4-213ENST00000565834 EXOC4Q96A65 974 aa19.11■□□□□ 0.65
COMMD4-213ENST00000565834 PDFQ9HBH1 243 aa19.11■□□□□ 0.65
COMMD4-213ENST00000565834 KIAA1522Q9P206 1035 aaPredicted RBP19.11■□□□□ 0.65
COMMD4-213ENST00000565834 CLEC4EQ9ULY5 219 aa19.11■□□□□ 0.65
COMMD4-213ENST00000565834 USP15Q9Y4E8 981 aaPredicted RBP19.11■□□□□ 0.65
COMMD4-213ENST00000565834 TTLL3Q9Y4R7 772 aa19.11■□□□□ 0.65
COMMD4-213ENST00000565834 APRTP07741 180 aa19.11■□□□□ 0.65
COMMD4-213ENST00000565834 LAMP2P13473 410 aa19.11■□□□□ 0.65
COMMD4-213ENST00000565834 NFKB1P19838 968 aa19.11■□□□□ 0.65
COMMD4-213ENST00000565834 CD68P34810 354 aaPredicted RBP19.11■□□□□ 0.65
COMMD4-213ENST00000565834 MAGEA6P43360 314 aa19.11■□□□□ 0.65
COMMD4-213ENST00000565834 SLC10A7Q0GE19 358 aa19.11■□□□□ 0.65
COMMD4-213ENST00000565834 LMAN2Q12907 356 aa19.11■□□□□ 0.65
COMMD4-213ENST00000565834 DHCR24Q15392 516 aa19.11■□□□□ 0.65
COMMD4-213ENST00000565834 LEKR1Q6ZMV7 388 aa19.11■□□□□ 0.65
COMMD4-213ENST00000565834 ZCCHC9Q8N567 271 aaKnown RBP19.11■□□□□ 0.65
COMMD4-213ENST00000565834 ZNF557Q8N988 423 aaPredicted RBP19.11■□□□□ 0.65
COMMD4-213ENST00000565834 ST13P5Q8NFI4 369 aaPredicted RBP19.11■□□□□ 0.65
COMMD4-213ENST00000565834 ZNF419Q96HQ0 510 aaPredicted RBP19.11■□□□□ 0.65
COMMD4-213ENST00000565834 FOXP3Q9BZS1 431 aa19.11■□□□□ 0.65
COMMD4-213ENST00000565834 TSPYL1Q9H0U9 437 aa19.11■□□□□ 0.65
COMMD4-213ENST00000565834 UBA2Q9UBT2 640 aaPredicted RBP19.11■□□□□ 0.65
COMMD4-213ENST00000565834 OR51B4Q9Y5P0 310 aa19.11■□□□□ 0.65
COMMD4-213ENST00000565834 TCRBV7S3A2A0A539 114 aa19.1■□□□□ 0.65
COMMD4-213ENST00000565834 TMEM63AO94886 807 aa19.1■□□□□ 0.65
COMMD4-213ENST00000565834 NFATC1O95644 943 aa19.1■□□□□ 0.65
COMMD4-213ENST00000565834 ADH1CP00326 375 aa19.1■□□□□ 0.65
COMMD4-213ENST00000565834 CYP17A1P05093 508 aa19.1■□□□□ 0.65
COMMD4-213ENST00000565834 HLA-DQB2P05538 268 aa19.1■□□□□ 0.65
COMMD4-213ENST00000565834 TPSB2P20231 275 aa19.1■□□□□ 0.65
COMMD4-213ENST00000565834 GLDCP23378 1020 aa19.1■□□□□ 0.65
COMMD4-213ENST00000565834 MMP13P45452 471 aa19.1■□□□□ 0.65
COMMD4-213ENST00000565834 LMAN1P49257 510 aa19.1■□□□□ 0.65
COMMD4-213ENST00000565834 LBRQ14739 615 aaKnown RBP19.1■□□□□ 0.65
COMMD4-213ENST00000565834 TPSAB1Q15661 275 aa19.1■□□□□ 0.65
COMMD4-213ENST00000565834 SYCP2LQ5T4T6 812 aa19.1■□□□□ 0.65
COMMD4-213ENST00000565834 TRIM68Q6AZZ1 485 aa19.1■□□□□ 0.65
COMMD4-213ENST00000565834 VITQ6UXI7 678 aa19.1■□□□□ 0.65
COMMD4-213ENST00000565834 TEX26Q8N6G2 289 aa19.1■□□□□ 0.65
COMMD4-213ENST00000565834 DCAF4L2Q8NA75 395 aa19.1■□□□□ 0.65
COMMD4-213ENST00000565834 MYLIPQ8WY64 445 aa19.1■□□□□ 0.65
COMMD4-213ENST00000565834 SUSD6Q92537 303 aa19.1■□□□□ 0.65
COMMD4-213ENST00000565834 ALG14Q96F25 216 aa19.1■□□□□ 0.65
COMMD4-213ENST00000565834 ASIC4Q96FT7 647 aa19.1■□□□□ 0.65
COMMD4-213ENST00000565834 GLOD4Q9HC38 313 aa19.1■□□□□ 0.65
COMMD4-213ENST00000565834 H3BQ06 376 aaPredicted RBP19.09■□□□□ 0.65
COMMD4-213ENST00000565834 GOLGA8MH3BSY2 632 aa19.09■□□□□ 0.65
COMMD4-213ENST00000565834 CD70P32970 193 aa19.09■□□□□ 0.65
COMMD4-213ENST00000565834 SLC12A1Q13621 1099 aa19.09■□□□□ 0.65
COMMD4-213ENST00000565834 ZNF235Q14590 738 aa19.09■□□□□ 0.65
COMMD4-213ENST00000565834 PDGFRLQ15198 375 aa19.09■□□□□ 0.65
COMMD4-213ENST00000565834 CCDC25Q86WR0 208 aa19.09■□□□□ 0.65
COMMD4-213ENST00000565834 MFSD6LQ8IWD5 586 aa19.09■□□□□ 0.65
COMMD4-213ENST00000565834 BBS5Q8N3I7 341 aa19.09■□□□□ 0.65
COMMD4-213ENST00000565834 ATP2A3Q93084 1043 aa19.09■□□□□ 0.65
COMMD4-213ENST00000565834 ZFYVE19Q96K21 471 aa19.09■□□□□ 0.65
COMMD4-213ENST00000565834 C2orf49Q9BVC5 232 aaPredicted RBP19.09■□□□□ 0.65
COMMD4-213ENST00000565834 NT5MQ9NPB1 228 aa19.09■□□□□ 0.65
COMMD4-213ENST00000565834 ABCB8Q9NUT2 735 aa19.09■□□□□ 0.65
COMMD4-213ENST00000565834 SNAP91O60641 907 aa19.08■□□□□ 0.65
COMMD4-213ENST00000565834 ADH5P11766 374 aa19.08■□□□□ 0.65
COMMD4-213ENST00000565834 GAD2Q05329 585 aa19.08■□□□□ 0.65
COMMD4-213ENST00000565834 TNK2Q07912 1038 aa19.08■□□□□ 0.65
COMMD4-213ENST00000565834 DHX9Q08211 1270 aaKnown RBP19.08■□□□□ 0.65
COMMD4-213ENST00000565834 PRPSAP1Q14558 356 aa19.08■□□□□ 0.65
COMMD4-213ENST00000565834 RFTN1Q14699 578 aaPredicted RBP19.08■□□□□ 0.65
COMMD4-213ENST00000565834 CCDC85BQ15834 202 aaPredicted RBP19.08■□□□□ 0.65
COMMD4-213ENST00000565834 PLEKHG6Q3KR16 790 aa19.08■□□□□ 0.65
COMMD4-213ENST00000565834 PPP1R21Q6ZMI0 780 aa19.08■□□□□ 0.65
COMMD4-213ENST00000565834 CEP128Q6ZU80 1094 aa19.08■□□□□ 0.65
COMMD4-213ENST00000565834 OTOP3Q7RTS5 596 aa19.08■□□□□ 0.65
COMMD4-213ENST00000565834 TMC3Q7Z5M5 1100 aa19.08■□□□□ 0.65
COMMD4-213ENST00000565834 YAF2Q8IY57 180 aa19.08■□□□□ 0.65
COMMD4-213ENST00000565834 APCDD1Q8J025 514 aa19.08■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms