RNA–Protein interactions for RNA: ENST00000565370.1

SPG7-211, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 686 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-211ENST00000565370 PPP1R16AQ96I34 528 aa12.58□□□□□ -0.4
SPG7-211ENST00000565370 PSMB7Q99436 277 aa12.58□□□□□ -0.4
SPG7-211ENST00000565370 NCAPGQ9BPX3 1015 aa12.58□□□□□ -0.4
SPG7-211ENST00000565370 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.58□□□□□ -0.4
SPG7-211ENST00000565370 CEP44Q9C0F1 390 aa12.58□□□□□ -0.4
SPG7-211ENST00000565370 C6orf106Q9H6K1 298 aaPredicted RBP12.58□□□□□ -0.4
SPG7-211ENST00000565370 CATSPERBQ9H7T0 1116 aa12.58□□□□□ -0.4
SPG7-211ENST00000565370 DYRK4Q9NR20 520 aa12.58□□□□□ -0.4
SPG7-211ENST00000565370 CNOT8Q9UFF9 292 aaKnown RBP12.58□□□□□ -0.4
SPG7-211ENST00000565370 ADAMTS1Q9UHI8 967 aa12.58□□□□□ -0.4
SPG7-211ENST00000565370 EIF2B4Q9UI10 523 aaKnown RBP12.58□□□□□ -0.4
SPG7-211ENST00000565370 LUC7L2Q9Y383 392 aaKnown RBP12.58□□□□□ -0.4
SPG7-211ENST00000565370 ZFHX4Q86UP3 3567 aa12.58□□□□□ -0.4
SPG7-211ENST00000565370 CACNA1EQ15878 2313 aa12.57□□□□□ -0.4
SPG7-211ENST00000565370 GON4LQ3T8J9 2241 aa12.57□□□□□ -0.4
SPG7-211ENST00000565370 EIF3CLB5ME19 914 aaKnown RBP12.57□□□□□ -0.4
SPG7-211ENST00000565370 DDX3XO00571 662 aaKnown RBP eCLIP12.57□□□□□ -0.4
SPG7-211ENST00000565370 CDX4O14627 284 aaPredicted RBP12.57□□□□□ -0.4
SPG7-211ENST00000565370 FGF10O15520 208 aaPredicted RBP12.57□□□□□ -0.4
SPG7-211ENST00000565370 FTLP02792 175 aaPredicted RBP12.57□□□□□ -0.4
SPG7-211ENST00000565370 PRNPP04156 253 aa12.57□□□□□ -0.4
SPG7-211ENST00000565370 VAV1P15498 845 aa12.57□□□□□ -0.4
SPG7-211ENST00000565370 CD27P26842 260 aa12.57□□□□□ -0.4
SPG7-211ENST00000565370 MAOBP27338 520 aa12.57□□□□□ -0.4
SPG7-211ENST00000565370 EPHB2P29323 1055 aa12.57□□□□□ -0.4
SPG7-211ENST00000565370 L1CAMP32004 1257 aa12.57□□□□□ -0.4
SPG7-211ENST00000565370 SERPINH1P50454 418 aaKnown RBP12.57□□□□□ -0.4
SPG7-211ENST00000565370 ADPRHP54922 357 aa12.57□□□□□ -0.4
SPG7-211ENST00000565370 GRIK2Q13002 908 aa12.57□□□□□ -0.4
SPG7-211ENST00000565370 MAMLD1Q13495 774 aa12.57□□□□□ -0.4
SPG7-211ENST00000565370 RAB6CQ53S08 254 aa12.57□□□□□ -0.4
SPG7-211ENST00000565370 PLEKHA7Q6IQ23 1121 aa12.57□□□□□ -0.4
SPG7-211ENST00000565370 NCEH1Q6PIU2 408 aa12.57□□□□□ -0.4
SPG7-211ENST00000565370 IL27RAQ6UWB1 636 aa12.57□□□□□ -0.4
SPG7-211ENST00000565370 ADAT2Q7Z6V5 191 aaKnown RBP12.57□□□□□ -0.4
SPG7-211ENST00000565370 PCDH20Q8N6Y1 951 aaKnown RBP12.57□□□□□ -0.4
SPG7-211ENST00000565370 OR14C36Q8NHC7 312 aa12.57□□□□□ -0.4
SPG7-211ENST00000565370 PIP4K2CQ8TBX8 421 aa12.57□□□□□ -0.4
SPG7-211ENST00000565370 FNIP1Q8TF40 1166 aa12.57□□□□□ -0.4
SPG7-211ENST00000565370 FAM129BQ96TA1 746 aa12.57□□□□□ -0.4
SPG7-211ENST00000565370 EIF3CQ99613 913 aaKnown RBP12.57□□□□□ -0.4
SPG7-211ENST00000565370 RAB6CQ9H0N0 254 aa12.57□□□□□ -0.4
SPG7-211ENST00000565370 MAGEH1Q9H213 219 aa12.57□□□□□ -0.4
SPG7-211ENST00000565370 SLC32A1Q9H598 525 aa12.57□□□□□ -0.4
SPG7-211ENST00000565370 SERGEFQ9UGK8 458 aa12.57□□□□□ -0.4
SPG7-211ENST00000565370 CAPN11Q9UMQ6 739 aa12.57□□□□□ -0.4
SPG7-211ENST00000565370 AP4E1Q9UPM8 1137 aa12.57□□□□□ -0.4
SPG7-211ENST00000565370 MAP1BP46821 2468 aaKnown RBP12.56□□□□□ -0.4
SPG7-211ENST00000565370 ZSCAN5CA6NGD5 496 aaPredicted RBP12.56□□□□□ -0.4
SPG7-211ENST00000565370 MCF2LO15068 1137 aa12.56□□□□□ -0.4
SPG7-211ENST00000565370 CREB3O43889 395 aa12.56□□□□□ -0.4
SPG7-211ENST00000565370 PRPSAP2O60256 369 aa12.56□□□□□ -0.4
SPG7-211ENST00000565370 GYPCP04921 128 aa12.56□□□□□ -0.4
SPG7-211ENST00000565370 SKILP12757 684 aa12.56□□□□□ -0.4
SPG7-211ENST00000565370 GRIA4P48058 902 aa12.56□□□□□ -0.4
SPG7-211ENST00000565370 NOVA1P51513 510 aaKnown RBP12.56□□□□□ -0.4
SPG7-211ENST00000565370 TPI1P60174 286 aa12.56□□□□□ -0.4
SPG7-211ENST00000565370 POLD3Q15054 466 aaPredicted RBP12.56□□□□□ -0.4
SPG7-211ENST00000565370 PSAPL1Q6NUJ1 521 aa12.56□□□□□ -0.4
SPG7-211ENST00000565370 LINGO4Q6UY18 593 aa12.56□□□□□ -0.4
SPG7-211ENST00000565370 NLRP14Q86W24 1093 aa12.56□□□□□ -0.4
SPG7-211ENST00000565370 AADATQ8N5Z0 425 aa12.56□□□□□ -0.4
SPG7-211ENST00000565370 RTL3Q8N8U3 475 aaKnown RBP12.56□□□□□ -0.4
SPG7-211ENST00000565370 CPLX3Q8WVH0 158 aa12.56□□□□□ -0.4
SPG7-211ENST00000565370 SKA1Q96BD8 255 aa12.56□□□□□ -0.4
SPG7-211ENST00000565370 BIRC7Q96CA5 298 aa12.56□□□□□ -0.4
SPG7-211ENST00000565370 XPO4Q9C0E2 1151 aaKnown RBP12.56□□□□□ -0.4
SPG7-211ENST00000565370 NEUROG2Q9H2A3 272 aa12.56□□□□□ -0.4
SPG7-211ENST00000565370 KDM4CQ9H3R0 1056 aa12.56□□□□□ -0.4
SPG7-211ENST00000565370 OSGEPQ9NPF4 335 aa12.56□□□□□ -0.4
SPG7-211ENST00000565370 FSCN3Q9NQT6 498 aa12.56□□□□□ -0.4
SPG7-211ENST00000565370 ZNF212Q9UDV6 495 aa12.56□□□□□ -0.4
SPG7-211ENST00000565370 DNAI1Q9UI46 699 aa12.56□□□□□ -0.4
SPG7-211ENST00000565370 FZD10Q9ULW2 581 aa12.56□□□□□ -0.4
SPG7-211ENST00000565370 NEU3Q9UQ49 428 aa12.56□□□□□ -0.4
SPG7-211ENST00000565370 NUMA1Q14980 2115 aa12.56□□□□□ -0.4
SPG7-211ENST00000565370 ADAMTS9Q9P2N4 1935 aa12.55□□□□□ -0.4
SPG7-211ENST00000565370 FAM72CH0Y354 149 aa12.55□□□□□ -0.4
SPG7-211ENST00000565370 KPNA3O00505 521 aaPredicted RBP12.55□□□□□ -0.4
SPG7-211ENST00000565370 CSRP1P21291 193 aaKnown RBP12.55□□□□□ -0.4
SPG7-211ENST00000565370 GLDCP23378 1020 aa12.55□□□□□ -0.4
SPG7-211ENST00000565370 CHRNA3P32297 505 aa12.55□□□□□ -0.4
SPG7-211ENST00000565370 NUDT1P36639 197 aa12.55□□□□□ -0.4
SPG7-211ENST00000565370 CCR5P51681 352 aa12.55□□□□□ -0.4
SPG7-211ENST00000565370 ZNF135P52742 658 aaPredicted RBP12.55□□□□□ -0.4
SPG7-211ENST00000565370 GALCP54803 685 aa12.55□□□□□ -0.4
SPG7-211ENST00000565370 TSR1Q2NL82 804 aaKnown RBP12.55□□□□□ -0.4
SPG7-211ENST00000565370 PARP15Q460N3 678 aa12.55□□□□□ -0.4
SPG7-211ENST00000565370 SLC45A4Q5BKX6 768 aa12.55□□□□□ -0.4
SPG7-211ENST00000565370 FAM72AQ5TYM5 149 aa12.55□□□□□ -0.4
SPG7-211ENST00000565370 FAM72DQ6L9T8 149 aa12.55□□□□□ -0.4
SPG7-211ENST00000565370 FAM72BQ86X60 149 aa12.55□□□□□ -0.4
SPG7-211ENST00000565370 GRIN3AQ8TCU5 1115 aa12.55□□□□□ -0.4
SPG7-211ENST00000565370 ACE2Q9BYF1 805 aaPredicted RBP12.55□□□□□ -0.4
SPG7-211ENST00000565370 TNKS2Q9H2K2 1166 aa12.55□□□□□ -0.4
SPG7-211ENST00000565370 DEF6Q9H4E7 631 aa12.55□□□□□ -0.4
SPG7-211ENST00000565370 DHX35Q9H5Z1 703 aaKnown RBP12.55□□□□□ -0.4
SPG7-211ENST00000565370 TM9SF3Q9HD45 589 aa12.55□□□□□ -0.4
SPG7-211ENST00000565370 DNAAF2Q9NVR5 837 aaKnown RBP12.55□□□□□ -0.4
SPG7-211ENST00000565370 ZNHIT6Q9NWK9 470 aaKnown RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms