RNA–Protein interactions for RNA: ENST00000564106.1

UBFD1-203, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 587 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-203ENST00000564106 OLFM3Q96PB7 478 aa9.99□□□□□ -0.81
UBFD1-203ENST00000564106 KLC2Q9H0B6 622 aa9.99□□□□□ -0.81
UBFD1-203ENST00000564106 NEUROG2Q9H2A3 272 aa9.99□□□□□ -0.81
UBFD1-203ENST00000564106 NMUR1Q9HB89 426 aa9.99□□□□□ -0.81
UBFD1-203ENST00000564106 DTLQ9NZJ0 730 aa9.99□□□□□ -0.81
UBFD1-203ENST00000564106 TRPM5Q9NZQ8 1165 aa9.99□□□□□ -0.81
UBFD1-203ENST00000564106 MARCH2Q9P0N8 246 aa9.99□□□□□ -0.81
UBFD1-203ENST00000564106 SAE1Q9UBE0 346 aaPredicted RBP9.99□□□□□ -0.81
UBFD1-203ENST00000564106 FAM153AQ9UHL3 310 aa9.99□□□□□ -0.81
UBFD1-203ENST00000564106 WNT6Q9Y6F9 365 aa9.99□□□□□ -0.81
UBFD1-203ENST00000564106 DOCK4Q8N1I0 1966 aa9.98□□□□□ -0.81
UBFD1-203ENST00000564106 KCNU1A8MYU2 1149 aa9.98□□□□□ -0.81
UBFD1-203ENST00000564106 MAN2B1O00754 1011 aa9.98□□□□□ -0.81
UBFD1-203ENST00000564106 DCLK1O15075 740 aa9.98□□□□□ -0.81
UBFD1-203ENST00000564106 EIF3HO15372 352 aaKnown RBP eCLIP9.98□□□□□ -0.81
UBFD1-203ENST00000564106 RRP9O43818 475 aaKnown RBP9.98□□□□□ -0.81
UBFD1-203ENST00000564106 TLR5O60602 858 aa9.98□□□□□ -0.81
UBFD1-203ENST00000564106 PAGE1O75459 146 aa9.98□□□□□ -0.81
UBFD1-203ENST00000564106 ERCC2P18074 760 aa9.98□□□□□ -0.81
UBFD1-203ENST00000564106 AMPD1P23109 780 aa9.98□□□□□ -0.81
UBFD1-203ENST00000564106 CDC25CP30307 473 aa9.98□□□□□ -0.81
UBFD1-203ENST00000564106 ID4P47928 161 aa9.98□□□□□ -0.81
UBFD1-203ENST00000564106 VPS41P49754 854 aa9.98□□□□□ -0.81
UBFD1-203ENST00000564106 PMS2P54278 862 aa9.98□□□□□ -0.81
UBFD1-203ENST00000564106 EFEMP1Q12805 493 aa9.98□□□□□ -0.81
UBFD1-203ENST00000564106 ARHGAP15Q53QZ3 475 aa9.98□□□□□ -0.81
UBFD1-203ENST00000564106 HECTD3Q5T447 861 aa9.98□□□□□ -0.81
UBFD1-203ENST00000564106 DENND2CQ68D51 928 aa9.98□□□□□ -0.81
UBFD1-203ENST00000564106 RHBDF2Q6PJF5 856 aa9.98□□□□□ -0.81
UBFD1-203ENST00000564106 NPNTQ6UXI9 565 aa9.98□□□□□ -0.81
UBFD1-203ENST00000564106 RELL1Q8IUW5 271 aa9.98□□□□□ -0.81
UBFD1-203ENST00000564106 LRRC49Q8IUZ0 686 aa9.98□□□□□ -0.81
UBFD1-203ENST00000564106 YAF2Q8IY57 180 aa9.98□□□□□ -0.81
UBFD1-203ENST00000564106 ZCCHC9Q8N567 271 aaKnown RBP9.98□□□□□ -0.81
UBFD1-203ENST00000564106 FAM71DQ8N9W8 422 aa9.98□□□□□ -0.81
UBFD1-203ENST00000564106 TTC16Q8NEE8 873 aa9.98□□□□□ -0.81
UBFD1-203ENST00000564106 CSGALNACT1Q8TDX6 532 aa9.98□□□□□ -0.81
UBFD1-203ENST00000564106 HTR3CQ8WXA8 447 aa9.98□□□□□ -0.81
UBFD1-203ENST00000564106 PLD4Q96BZ4 506 aa9.98□□□□□ -0.81
UBFD1-203ENST00000564106 SLC39A13Q96H72 371 aa9.98□□□□□ -0.81
UBFD1-203ENST00000564106 TTC25Q96NG3 672 aa9.98□□□□□ -0.81
UBFD1-203ENST00000564106 NELL2Q99435 816 aa9.98□□□□□ -0.81
UBFD1-203ENST00000564106 VAT1Q99536 393 aa9.98□□□□□ -0.81
UBFD1-203ENST00000564106 NACA2Q9H009 215 aa9.98□□□□□ -0.81
UBFD1-203ENST00000564106 RNF38Q9H0F5 515 aa9.98□□□□□ -0.81
UBFD1-203ENST00000564106 LINC00597Q9H2U6 94 aa9.98□□□□□ -0.81
UBFD1-203ENST00000564106 PABPC3Q9H361 631 aaKnown RBP9.98□□□□□ -0.81
UBFD1-203ENST00000564106 TRPC7Q9HCX4 862 aa9.98□□□□□ -0.81
UBFD1-203ENST00000564106 OBP2AQ9NY56 170 aa9.98□□□□□ -0.81
UBFD1-203ENST00000564106 FAM53CQ9NYF3 392 aa9.98□□□□□ -0.81
UBFD1-203ENST00000564106 SFMBT1Q9UHJ3 866 aa9.98□□□□□ -0.81
UBFD1-203ENST00000564106 DNMT3LQ9UJW3 386 aa9.98□□□□□ -0.81
UBFD1-203ENST00000564106 ATP8A1Q9Y2Q0 1164 aa9.98□□□□□ -0.81
UBFD1-203ENST00000564106 PCDHGA2Q9Y5H1 932 aa9.98□□□□□ -0.81
UBFD1-203ENST00000564106 SPAG17Q6Q759 2223 aa9.98□□□□□ -0.81
UBFD1-203ENST00000564106 C5orf60A6NFR6 353 aa9.97□□□□□ -0.81
UBFD1-203ENST00000564106 MSI1O43347 362 aaKnown RBP9.97□□□□□ -0.81
UBFD1-203ENST00000564106 MFSD11O43934 449 aa9.97□□□□□ -0.81
UBFD1-203ENST00000564106 OPHN1O60890 802 aa9.97□□□□□ -0.81
UBFD1-203ENST00000564106 GCATO75600 419 aa9.97□□□□□ -0.81
UBFD1-203ENST00000564106 LRIG2O94898 1065 aa9.97□□□□□ -0.81
UBFD1-203ENST00000564106 IGLV3-27P01718 113 aa9.97□□□□□ -0.81
UBFD1-203ENST00000564106 NUDT17P0C025 328 aa9.97□□□□□ -0.81
UBFD1-203ENST00000564106 RBL1P28749 1068 aa9.97□□□□□ -0.81
UBFD1-203ENST00000564106 HSD17B3P37058 310 aa9.97□□□□□ -0.81
UBFD1-203ENST00000564106 MAGEA9P43362 315 aa9.97□□□□□ -0.81
UBFD1-203ENST00000564106 MLLT6P55198 1093 aaPredicted RBP9.97□□□□□ -0.81
UBFD1-203ENST00000564106 BASP1P80723 227 aaKnown RBP9.97□□□□□ -0.81
UBFD1-203ENST00000564106 CDK16Q00536 496 aa9.97□□□□□ -0.81
UBFD1-203ENST00000564106 GBE1Q04446 702 aa9.97□□□□□ -0.81
UBFD1-203ENST00000564106 IFFO1Q0D2I5 559 aa9.97□□□□□ -0.81
UBFD1-203ENST00000564106 RUNX3Q13761 415 aa9.97□□□□□ -0.81
UBFD1-203ENST00000564106 PRKD1Q15139 912 aaPredicted RBP9.97□□□□□ -0.81
UBFD1-203ENST00000564106 RNASEH2BQ5TBB1 312 aaKnown RBP9.97□□□□□ -0.81
UBFD1-203ENST00000564106 MANEALQ5VSG8 457 aa9.97□□□□□ -0.81
UBFD1-203ENST00000564106 CENPUQ71F23 418 aa9.97□□□□□ -0.81
UBFD1-203ENST00000564106 IQCKQ8N0W5 287 aa9.97□□□□□ -0.81
UBFD1-203ENST00000564106 CELF5Q8N6W0 485 aaKnown RBP9.97□□□□□ -0.81
UBFD1-203ENST00000564106 HDAC11Q96DB2 347 aa9.97□□□□□ -0.81
UBFD1-203ENST00000564106 P2RY11Q96G91 374 aa9.97□□□□□ -0.81
UBFD1-203ENST00000564106 FCRL2Q96LA5 508 aaPredicted RBP9.97□□□□□ -0.81
UBFD1-203ENST00000564106 PPP1R2P1Q96PQ5 205 aa9.97□□□□□ -0.81
UBFD1-203ENST00000564106 TXLNGYQ9BZA5 131 aa9.97□□□□□ -0.81
UBFD1-203ENST00000564106 TDP1Q9NUW8 608 aa9.97□□□□□ -0.81
UBFD1-203ENST00000564106 OSER1Q9NX31 292 aa9.97□□□□□ -0.81
UBFD1-203ENST00000564106 PPARGC1AQ9UBK2 798 aaKnown RBP9.97□□□□□ -0.81
UBFD1-203ENST00000564106 MRPS17Q9Y2R5 130 aaKnown RBP9.97□□□□□ -0.81
UBFD1-203ENST00000564106 RALGAPA1Q6GYQ0 2036 aa9.96□□□□□ -0.81
UBFD1-203ENST00000564106 SLC12A8A0AV02 714 aa9.96□□□□□ -0.82
UBFD1-203ENST00000564106 GOLGA8KD6RF30 607 aa9.96□□□□□ -0.82
UBFD1-203ENST00000564106 E9PAM4 449 aa9.96□□□□□ -0.82
UBFD1-203ENST00000564106 FAM72CH0Y354 149 aa9.96□□□□□ -0.82
UBFD1-203ENST00000564106 FGF19O95750 216 aa9.96□□□□□ -0.82
UBFD1-203ENST00000564106 HNRNPLP14866 589 aaKnown RBP eCLIP9.96□□□□□ -0.82
UBFD1-203ENST00000564106 PFKLP17858 780 aa9.96□□□□□ -0.82
UBFD1-203ENST00000564106 GJA4P35212 333 aa9.96□□□□□ -0.82
UBFD1-203ENST00000564106 RPL22P35268 128 aaKnown RBP9.96□□□□□ -0.82
UBFD1-203ENST00000564106 FDFT1P37268 417 aa9.96□□□□□ -0.82
UBFD1-203ENST00000564106 SLC11A2P49281 568 aa9.96□□□□□ -0.82
UBFD1-203ENST00000564106 HARS2P49590 506 aaKnown RBP9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms