RNA–Protein interactions for RNA: ENST00000564096.1

CLK3-214, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 805 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-214ENST00000564096 ACE2Q9BYF1 805 aaPredicted RBP13.08□□□□□ -0.32
CLK3-214ENST00000564096 TRIM31Q9BZY9 425 aa13.08□□□□□ -0.32
CLK3-214ENST00000564096 DPH5Q9H2P9 285 aa13.08□□□□□ -0.32
CLK3-214ENST00000564096 C10orf88Q9H8K7 445 aa13.08□□□□□ -0.32
CLK3-214ENST00000564096 USP29Q9HBJ7 922 aa13.08□□□□□ -0.32
CLK3-214ENST00000564096 EPB41L5Q9HCM4 733 aa13.08□□□□□ -0.32
CLK3-214ENST00000564096 ABCB8Q9NUT2 735 aa13.08□□□□□ -0.32
CLK3-214ENST00000564096 IGSF9Q9P2J2 1179 aa13.08□□□□□ -0.32
CLK3-214ENST00000564096 SEPT3Q9UH03 358 aa13.08□□□□□ -0.32
CLK3-214ENST00000564096 RSPH14Q9UHP6 348 aa13.08□□□□□ -0.32
CLK3-214ENST00000564096 SLC25A13Q9UJS0 675 aa13.08□□□□□ -0.32
CLK3-214ENST00000564096 TTLL3Q9Y4R7 772 aa13.08□□□□□ -0.32
CLK3-214ENST00000564096 KIF26AQ9ULI4 1882 aaPredicted RBP13.08□□□□□ -0.32
CLK3-214ENST00000564096 E7EVH7 732 aa13.07□□□□□ -0.32
CLK3-214ENST00000564096 MZF1P28698 734 aaPredicted RBP13.07□□□□□ -0.32
CLK3-214ENST00000564096 TNFRSF8P28908 595 aa13.07□□□□□ -0.32
CLK3-214ENST00000564096 HLA-FP30511 346 aa13.07□□□□□ -0.32
CLK3-214ENST00000564096 CD70P32970 193 aa13.07□□□□□ -0.32
CLK3-214ENST00000564096 PLK1P53350 603 aa13.07□□□□□ -0.32
CLK3-214ENST00000564096 DRG2P55039 364 aaKnown RBP13.07□□□□□ -0.32
CLK3-214ENST00000564096 MRPS25P82663 173 aaKnown RBP13.07□□□□□ -0.32
CLK3-214ENST00000564096 ZBTB17Q13105 803 aa13.07□□□□□ -0.32
CLK3-214ENST00000564096 HLTFQ14527 1009 aaKnown RBP eCLIP13.07□□□□□ -0.32
CLK3-214ENST00000564096 PRPSAP1Q14558 356 aa13.07□□□□□ -0.32
CLK3-214ENST00000564096 LBRQ14739 615 aaKnown RBP13.07□□□□□ -0.32
CLK3-214ENST00000564096 MAP9Q49MG5 647 aa13.07□□□□□ -0.32
CLK3-214ENST00000564096 TEX44Q53QW1 395 aa13.07□□□□□ -0.32
CLK3-214ENST00000564096 FSCBQ5H9T9 825 aa13.07□□□□□ -0.32
CLK3-214ENST00000564096 ANKRD20A2Q5SQ80 823 aa13.07□□□□□ -0.32
CLK3-214ENST00000564096 ANKRD20A1Q5TYW2 823 aa13.07□□□□□ -0.32
CLK3-214ENST00000564096 ANKRD20A3Q5VUR7 823 aa13.07□□□□□ -0.32
CLK3-214ENST00000564096 IZUMO3Q5VZ72 239 aa13.07□□□□□ -0.32
CLK3-214ENST00000564096 DUPD1Q68J44 220 aa13.07□□□□□ -0.32
CLK3-214ENST00000564096 WDR93Q6P2C0 686 aa13.07□□□□□ -0.32
CLK3-214ENST00000564096 NUDT18Q6ZVK8 323 aa13.07□□□□□ -0.32
CLK3-214ENST00000564096 B4GALNT4Q76KP1 1039 aa13.07□□□□□ -0.32
CLK3-214ENST00000564096 EIF1ADQ8N9N8 165 aaKnown RBP13.07□□□□□ -0.32
CLK3-214ENST00000564096 CCDC110Q8TBZ0 833 aa13.07□□□□□ -0.32
CLK3-214ENST00000564096 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.07□□□□□ -0.32
CLK3-214ENST00000564096 SEC14L1Q92503 715 aa13.07□□□□□ -0.32
CLK3-214ENST00000564096 DNASE1L2Q92874 299 aa13.07□□□□□ -0.32
CLK3-214ENST00000564096 GBA3Q9H227 469 aa13.07□□□□□ -0.32
CLK3-214ENST00000564096 ANKZF1Q9H8Y5 726 aa13.07□□□□□ -0.32
CLK3-214ENST00000564096 PDFQ9HBH1 243 aa13.07□□□□□ -0.32
CLK3-214ENST00000564096 HPS4Q9NQG7 708 aa13.07□□□□□ -0.32
CLK3-214ENST00000564096 ARGLU1Q9NWB6 273 aaPredicted RBP13.07□□□□□ -0.32
CLK3-214ENST00000564096 WHRNQ9P202 907 aa13.07□□□□□ -0.32
CLK3-214ENST00000564096 DEC1Q9P2X7 70 aa13.07□□□□□ -0.32
CLK3-214ENST00000564096 VPS51Q9UID3 782 aa13.07□□□□□ -0.32
CLK3-214ENST00000564096 SHOC2Q9UQ13 582 aa13.07□□□□□ -0.32
CLK3-214ENST00000564096 NEU2Q9Y3R4 380 aa13.07□□□□□ -0.32
CLK3-214ENST00000564096 ESYT3A0FGR9 886 aa13.06□□□□□ -0.32
CLK3-214ENST00000564096 J3KR12 359 aa13.06□□□□□ -0.32
CLK3-214ENST00000564096 ERLIN1O75477 346 aa13.06□□□□□ -0.32
CLK3-214ENST00000564096 SEC31AO94979 1220 aaKnown RBP13.06□□□□□ -0.32
CLK3-214ENST00000564096 JCHAINP01591 159 aa13.06□□□□□ -0.32
CLK3-214ENST00000564096 ASLP04424 464 aa13.06□□□□□ -0.32
CLK3-214ENST00000564096 ITIH2P19823 946 aa13.06□□□□□ -0.32
CLK3-214ENST00000564096 RPL22P35268 128 aaKnown RBP13.06□□□□□ -0.32
CLK3-214ENST00000564096 LMAN1P49257 510 aa13.06□□□□□ -0.32
CLK3-214ENST00000564096 PFKPQ01813 784 aa13.06□□□□□ -0.32
CLK3-214ENST00000564096 TNK2Q07912 1038 aa13.06□□□□□ -0.32
CLK3-214ENST00000564096 WASHC5Q12768 1159 aa13.06□□□□□ -0.32
CLK3-214ENST00000564096 EIF4HQ15056 248 aaKnown RBP13.06□□□□□ -0.32
CLK3-214ENST00000564096 E2F5Q15329 346 aa13.06□□□□□ -0.32
CLK3-214ENST00000564096 FUT11Q495W5 492 aa13.06□□□□□ -0.32
CLK3-214ENST00000564096 PPP1R21Q6ZMI0 780 aa13.06□□□□□ -0.32
CLK3-214ENST00000564096 CEP128Q6ZU80 1094 aa13.06□□□□□ -0.32
CLK3-214ENST00000564096 PID1Q7Z2X4 250 aa13.06□□□□□ -0.32
CLK3-214ENST00000564096 HOOK3Q86VS8 718 aa13.06□□□□□ -0.32
CLK3-214ENST00000564096 SUGP1Q8IWZ8 645 aaKnown RBP13.06□□□□□ -0.32
CLK3-214ENST00000564096 ETFBKMTQ8IXQ9 262 aa13.06□□□□□ -0.32
CLK3-214ENST00000564096 PPIL6Q8IXY8 311 aa13.06□□□□□ -0.32
CLK3-214ENST00000564096 ZNF567Q8N184 647 aa13.06□□□□□ -0.32
CLK3-214ENST00000564096 OR52K2Q8NGK3 314 aa13.06□□□□□ -0.32
CLK3-214ENST00000564096 USP33Q8TEY7 942 aa13.06□□□□□ -0.32
CLK3-214ENST00000564096 LRRN4Q8WUT4 740 aa13.06□□□□□ -0.32
CLK3-214ENST00000564096 TEKT5Q96M29 485 aa13.06□□□□□ -0.32
CLK3-214ENST00000564096 AGAP3Q96P47 875 aa13.06□□□□□ -0.32
CLK3-214ENST00000564096 IL12RB2Q99665 862 aa13.06□□□□□ -0.32
CLK3-214ENST00000564096 CEP41Q9BYV8 373 aa13.06□□□□□ -0.32
CLK3-214ENST00000564096 PLA2G2FQ9BZM2 168 aa13.06□□□□□ -0.32
CLK3-214ENST00000564096 POLR1EQ9GZS1 481 aaKnown RBP13.06□□□□□ -0.32
CLK3-214ENST00000564096 GDF3Q9NR23 364 aa13.06□□□□□ -0.32
CLK3-214ENST00000564096 RAB6BQ9NRW1 208 aa13.06□□□□□ -0.32
CLK3-214ENST00000564096 RBM22Q9NW64 420 aaKnown RBP eCLIP13.06□□□□□ -0.329e-10■□□□□ 8.1
CLK3-214ENST00000564096 MTRF1LQ9UGC7 380 aaKnown RBP13.06□□□□□ -0.32
CLK3-214ENST00000564096 DMGDHQ9UI17 866 aaKnown RBP13.06□□□□□ -0.32
CLK3-214ENST00000564096 TPX2Q9ULW0 747 aaKnown RBP13.06□□□□□ -0.32
CLK3-214ENST00000564096 SLC8A2Q9UPR5 921 aa13.06□□□□□ -0.32
CLK3-214ENST00000564096 SLC27A6Q9Y2P4 619 aa13.06□□□□□ -0.32
CLK3-214ENST00000564096 SNX24Q9Y343 169 aa13.06□□□□□ -0.32
CLK3-214ENST00000564096 DOCK6Q96HP0 2047 aa13.06□□□□□ -0.32
CLK3-214ENST00000564096 DOCK4Q8N1I0 1966 aa13.05□□□□□ -0.32
CLK3-214ENST00000564096 ERI2A8K979 691 aaKnown RBP13.05□□□□□ -0.32
CLK3-214ENST00000564096 DNALI1O14645 258 aaPredicted RBP13.05□□□□□ -0.32
CLK3-214ENST00000564096 TULP3O75386 442 aa13.05□□□□□ -0.32
CLK3-214ENST00000564096 HLA-DQB2P05538 268 aa13.05□□□□□ -0.32
CLK3-214ENST00000564096 ATP5BP06576 529 aaKnown RBP13.05□□□□□ -0.32
CLK3-214ENST00000564096 ZSCAN5DPP0CG00 497 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms