RNA–Protein interactions for RNA: ENST00000563781.5

HERPUD1-207, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 774 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-207ENST00000563781 FCARP24071 287 aa5.4□□□□□ -1.54
HERPUD1-207ENST00000563781 DDX6P26196 483 aaKnown RBP eCLIP5.4□□□□□ -1.54
HERPUD1-207ENST00000563781 ARHGAP25P42331 645 aa5.4□□□□□ -1.54
HERPUD1-207ENST00000563781 MATKP42679 507 aa5.4□□□□□ -1.54
HERPUD1-207ENST00000563781 PPP3CCP48454 512 aa5.4□□□□□ -1.54
HERPUD1-207ENST00000563781 TUBP50607 506 aa5.4□□□□□ -1.54
HERPUD1-207ENST00000563781 VAV2P52735 878 aa5.4□□□□□ -1.54
HERPUD1-207ENST00000563781 SNX16P57768 344 aa5.4□□□□□ -1.54
HERPUD1-207ENST00000563781 YWHAZP63104 245 aaKnown RBP5.4□□□□□ -1.54
HERPUD1-207ENST00000563781 ZXDBP98169 803 aa5.4□□□□□ -1.54
HERPUD1-207ENST00000563781 TFF2Q03403 129 aa5.4□□□□□ -1.54
HERPUD1-207ENST00000563781 SPA17Q15506 151 aa5.4□□□□□ -1.54
HERPUD1-207ENST00000563781 CCDC14Q49A88 953 aa5.4□□□□□ -1.54
HERPUD1-207ENST00000563781 RAB6CQ53S08 254 aa5.4□□□□□ -1.54
HERPUD1-207ENST00000563781 TRIM61Q5EBN2 209 aa5.4□□□□□ -1.54
HERPUD1-207ENST00000563781 EFHC1Q5JVL4 640 aa5.4□□□□□ -1.54
HERPUD1-207ENST00000563781 ATAT1Q5SQI0 421 aa5.4□□□□□ -1.54
HERPUD1-207ENST00000563781 C10orf76Q5T2E6 689 aa5.4□□□□□ -1.54
HERPUD1-207ENST00000563781 HECTD3Q5T447 861 aa5.4□□□□□ -1.54
HERPUD1-207ENST00000563781 SYPL2Q5VXT5 272 aa5.4□□□□□ -1.54
HERPUD1-207ENST00000563781 FOXB2Q5VYV0 432 aa5.4□□□□□ -1.54
HERPUD1-207ENST00000563781 BTBD8Q5XKL5 378 aa5.4□□□□□ -1.54
HERPUD1-207ENST00000563781 LETMD1Q6P1Q0 360 aa5.4□□□□□ -1.54
HERPUD1-207ENST00000563781 KLHDC10Q6PID8 442 aa5.4□□□□□ -1.54
HERPUD1-207ENST00000563781 GET4Q7L5D6 327 aaPredicted RBP5.4□□□□□ -1.54
HERPUD1-207ENST00000563781 BNIPLQ7Z465 357 aa5.4□□□□□ -1.54
HERPUD1-207ENST00000563781 STRA8Q7Z7C7 330 aa5.4□□□□□ -1.54
HERPUD1-207ENST00000563781 CPNE8Q86YQ8 564 aa5.4□□□□□ -1.54
HERPUD1-207ENST00000563781 ARHGAP18Q8N392 663 aa5.4□□□□□ -1.54
HERPUD1-207ENST00000563781 ZNF276Q8N554 614 aa5.4□□□□□ -1.54
HERPUD1-207ENST00000563781 ARL14EPQ8N8R7 260 aaPredicted RBP5.4□□□□□ -1.54
HERPUD1-207ENST00000563781 RXFP2Q8WXD0 754 aa5.4□□□□□ -1.54
HERPUD1-207ENST00000563781 CTNNBL1Q8WYA6 563 aaPredicted RBP5.4□□□□□ -1.54
HERPUD1-207ENST00000563781 RFFLQ8WZ73 363 aa5.4□□□□□ -1.54
HERPUD1-207ENST00000563781 FGF13Q92913 245 aa5.4□□□□□ -1.54
HERPUD1-207ENST00000563781 NT5C3BQ969T7 300 aa5.4□□□□□ -1.54
HERPUD1-207ENST00000563781 WBP2Q969T9 261 aa5.4□□□□□ -1.54
HERPUD1-207ENST00000563781 RSPRY1Q96DX4 576 aa5.4□□□□□ -1.54
HERPUD1-207ENST00000563781 RIPOR3Q96MK2 946 aa5.4□□□□□ -1.54
HERPUD1-207ENST00000563781 ZSWIM3Q96MP5 696 aa5.4□□□□□ -1.54
HERPUD1-207ENST00000563781 CLUHP3Q96NS8 147 aa5.4□□□□□ -1.54
HERPUD1-207ENST00000563781 NECTIN4Q96NY8 510 aa5.4□□□□□ -1.54
HERPUD1-207ENST00000563781 MCEEQ96PE7 176 aa5.4□□□□□ -1.54
HERPUD1-207ENST00000563781 GCNAQ96QF7 691 aa5.4□□□□□ -1.54
HERPUD1-207ENST00000563781 CYP2S1Q96SQ9 504 aa5.4□□□□□ -1.54
HERPUD1-207ENST00000563781 NPY6RQ99463 290 aa5.4□□□□□ -1.54
HERPUD1-207ENST00000563781 MIPEPQ99797 713 aa5.4□□□□□ -1.54
HERPUD1-207ENST00000563781 DDX23Q9BUQ8 820 aaKnown RBP5.4□□□□□ -1.54
HERPUD1-207ENST00000563781 SELENOOQ9BVL4 669 aa5.4□□□□□ -1.54
HERPUD1-207ENST00000563781 NUP85Q9BW27 656 aa5.4□□□□□ -1.54
HERPUD1-207ENST00000563781 RNF38Q9H0F5 515 aa5.4□□□□□ -1.54
HERPUD1-207ENST00000563781 RAB6CQ9H0N0 254 aa5.4□□□□□ -1.54
HERPUD1-207ENST00000563781 SMOC2Q9H3U7 446 aa5.4□□□□□ -1.54
HERPUD1-207ENST00000563781 TASP1Q9H6P5 420 aa5.4□□□□□ -1.54
HERPUD1-207ENST00000563781 TLR8Q9NR97 1041 aaKnown RBP5.4□□□□□ -1.54
HERPUD1-207ENST00000563781 PARVAQ9NVD7 372 aa5.4□□□□□ -1.54
HERPUD1-207ENST00000563781 CALCOCO1Q9P1Z2 691 aa5.4□□□□□ -1.54
HERPUD1-207ENST00000563781 MYO1AQ9UBC5 1043 aa5.4□□□□□ -1.54
HERPUD1-207ENST00000563781 TRIM10Q9UDY6 481 aa5.4□□□□□ -1.54
HERPUD1-207ENST00000563781 NUDT5Q9UKK9 219 aa5.4□□□□□ -1.54
HERPUD1-207ENST00000563781 CDH7Q9ULB5 785 aa5.4□□□□□ -1.54
HERPUD1-207ENST00000563781 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.4□□□□□ -1.542e-7■□□□□ 10.4
HERPUD1-207ENST00000563781 SCINQ9Y6U3 715 aa5.4□□□□□ -1.54
HERPUD1-207ENST00000563781 VCANP13611 3396 aa5.4□□□□□ -1.55
HERPUD1-207ENST00000563781 NOTCH4Q99466 2003 aa5.4□□□□□ -1.55
HERPUD1-207ENST00000563781 TRIOO75962 3097 aa5.39□□□□□ -1.55
HERPUD1-207ENST00000563781 A0A0A6YYK5 440 aaPredicted RBP5.39□□□□□ -1.55
HERPUD1-207ENST00000563781 TRAV19A0A0A6YYK7 116 aa5.39□□□□□ -1.55
HERPUD1-207ENST00000563781 C2CD4DB7Z1M9 353 aa5.39□□□□□ -1.55
HERPUD1-207ENST00000563781 I6L893 689 aaPredicted RBP5.39□□□□□ -1.55
HERPUD1-207ENST00000563781 IRAK2O43187 625 aa5.39□□□□□ -1.55
HERPUD1-207ENST00000563781 MSI1O43347 362 aaKnown RBP5.39□□□□□ -1.55
HERPUD1-207ENST00000563781 ENDOD1O94919 500 aa5.39□□□□□ -1.55
HERPUD1-207ENST00000563781 IPO7O95373 1038 aaKnown RBP5.39□□□□□ -1.55
HERPUD1-207ENST00000563781 IGLV3-27P01718 113 aa5.39□□□□□ -1.55
HERPUD1-207ENST00000563781 CKMP06732 381 aa5.39□□□□□ -1.55
HERPUD1-207ENST00000563781 RALAP11233 206 aa5.39□□□□□ -1.55
HERPUD1-207ENST00000563781 NCAM1P13591 858 aa5.39□□□□□ -1.55
HERPUD1-207ENST00000563781 IL9P15248 144 aa5.39□□□□□ -1.55
HERPUD1-207ENST00000563781 PDGFRAP16234 1089 aa5.39□□□□□ -1.55
HERPUD1-207ENST00000563781 PFKLP17858 780 aa5.39□□□□□ -1.55
HERPUD1-207ENST00000563781 HDCP19113 662 aa5.39□□□□□ -1.55
HERPUD1-207ENST00000563781 GPD1P21695 349 aa5.39□□□□□ -1.55
HERPUD1-207ENST00000563781 CCNFP41002 786 aa5.39□□□□□ -1.55
HERPUD1-207ENST00000563781 PTPN9P43378 593 aa5.39□□□□□ -1.55
HERPUD1-207ENST00000563781 ATXN1P54253 815 aaKnown RBP5.39□□□□□ -1.55
HERPUD1-207ENST00000563781 HADHBP55084 474 aaKnown RBP5.39□□□□□ -1.55
HERPUD1-207ENST00000563781 RNASE9P60153 205 aaKnown RBP5.39□□□□□ -1.55
HERPUD1-207ENST00000563781 KRT83P78385 493 aa5.39□□□□□ -1.55
HERPUD1-207ENST00000563781 SLC7A9P82251 487 aa5.39□□□□□ -1.55
HERPUD1-207ENST00000563781 EFEMP1Q12805 493 aa5.39□□□□□ -1.55
HERPUD1-207ENST00000563781 SMAD2Q15796 467 aaKnown RBP5.39□□□□□ -1.55
HERPUD1-207ENST00000563781 C15orf59Q2T9L4 293 aaPredicted RBP5.39□□□□□ -1.55
HERPUD1-207ENST00000563781 GFOD2Q3B7J2 385 aa5.39□□□□□ -1.55
HERPUD1-207ENST00000563781 ARHGAP15Q53QZ3 475 aa5.39□□□□□ -1.55
HERPUD1-207ENST00000563781 DCAF6Q58WW2 860 aa5.39□□□□□ -1.55
HERPUD1-207ENST00000563781 FAM78AQ5JUQ0 283 aa5.39□□□□□ -1.55
HERPUD1-207ENST00000563781 C10orf120Q5SQS8 335 aa5.39□□□□□ -1.55
HERPUD1-207ENST00000563781 ARTNQ5T4W7 220 aa5.39□□□□□ -1.55
HERPUD1-207ENST00000563781 CDCP2Q5VXM1 449 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms