RNA–Protein interactions for RNA: ENST00000563683.5

RNF40-204, Transcript of ring finger protein 40, humanhuman

TSL 5 BASIC

Gene RNF40, Length 4,063 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-204ENST00000563683 AURKCQ9UQB9 309 aa10.63□□□□□ -0.71
RNF40-204ENST00000563683 LZTS1Q9Y250 596 aa10.63□□□□□ -0.71
RNF40-204ENST00000563683 SMCHD1A6NHR9 2005 aa10.63□□□□□ -0.71
RNF40-204ENST00000563683 VILLO15195 856 aa10.63□□□□□ -0.71
RNF40-204ENST00000563683 GPR182O15218 404 aa10.63□□□□□ -0.71
RNF40-204ENST00000563683 DARSP14868 501 aaKnown RBP10.63□□□□□ -0.71
RNF40-204ENST00000563683 NME5P56597 212 aa10.63□□□□□ -0.71
RNF40-204ENST00000563683 FLOT2Q14254 428 aa10.63□□□□□ -0.71
RNF40-204ENST00000563683 FAM83EQ2M2I3 478 aa10.63□□□□□ -0.71
RNF40-204ENST00000563683 RAB6CQ53S08 254 aa10.63□□□□□ -0.71
RNF40-204ENST00000563683 RARS2Q5T160 578 aaKnown RBP10.63□□□□□ -0.71
RNF40-204ENST00000563683 SCARA3Q6AZY7 606 aa10.63□□□□□ -0.71
RNF40-204ENST00000563683 TAS2R42Q7RTR8 314 aa10.63□□□□□ -0.71
RNF40-204ENST00000563683 PDZD8Q8NEN9 1154 aa10.63□□□□□ -0.71
RNF40-204ENST00000563683 KCTD15Q96SI1 283 aaPredicted RBP10.63□□□□□ -0.71
RNF40-204ENST00000563683 RAB6CQ9H0N0 254 aa10.63□□□□□ -0.71
RNF40-204ENST00000563683 ZNF395Q9H8N7 513 aaPredicted RBP10.63□□□□□ -0.71
RNF40-204ENST00000563683 NMRAL1Q9HBL8 299 aa10.63□□□□□ -0.71
RNF40-204ENST00000563683 C6orf203Q9P0P8 240 aaPredicted RBP10.63□□□□□ -0.71
RNF40-204ENST00000563683 SLC17A6Q9P2U8 582 aa10.63□□□□□ -0.71
RNF40-204ENST00000563683 RAB26Q9ULW5 256 aa10.63□□□□□ -0.71
RNF40-204ENST00000563683 HBS1LQ9Y450 684 aaKnown RBP10.63□□□□□ -0.71
RNF40-204ENST00000563683 CDK5RAP2Q96SN8 1893 aa10.63□□□□□ -0.71
RNF40-204ENST00000563683 COL24A1Q17RW2 1714 aa10.63□□□□□ -0.71
RNF40-204ENST00000563683 TYW5A2RUC4 315 aaKnown RBP10.63□□□□□ -0.71
RNF40-204ENST00000563683 CXorf49A8MYA2 514 aaPredicted RBP10.63□□□□□ -0.71
RNF40-204ENST00000563683 E5RI56 91 aa10.63□□□□□ -0.71
RNF40-204ENST00000563683 BIRC5O15392 142 aa10.63□□□□□ -0.71
RNF40-204ENST00000563683 NCAM2O15394 837 aa10.63□□□□□ -0.71
RNF40-204ENST00000563683 SNX2O60749 519 aa10.63□□□□□ -0.71
RNF40-204ENST00000563683 MMP3P08254 477 aa10.63□□□□□ -0.71
RNF40-204ENST00000563683 FSCN1Q16658 493 aaKnown RBP10.63□□□□□ -0.71
RNF40-204ENST00000563683 SH3D19Q5HYK7 790 aa10.63□□□□□ -0.71
RNF40-204ENST00000563683 CROCCP3Q8IVE0 287 aa10.63□□□□□ -0.71
RNF40-204ENST00000563683 DNAJC1Q96KC8 554 aaKnown RBP10.63□□□□□ -0.71
RNF40-204ENST00000563683 SUN2Q9UH99 717 aa10.63□□□□□ -0.71
RNF40-204ENST00000563683 SH3GLB1Q9Y371 365 aa10.63□□□□□ -0.71
RNF40-204ENST00000563683 S100BP04271 92 aaPredicted RBP10.63□□□□□ -0.71
RNF40-204ENST00000563683 SMPD1P17405 629 aa10.63□□□□□ -0.71
RNF40-204ENST00000563683 TFE3P19532 575 aaPredicted RBP10.63□□□□□ -0.71
RNF40-204ENST00000563683 PDAP1Q13442 181 aaKnown RBP10.63□□□□□ -0.71
RNF40-204ENST00000563683 SLC25A52Q3SY17 297 aa10.63□□□□□ -0.71
RNF40-204ENST00000563683 CERCAMQ5T4B2 595 aa10.63□□□□□ -0.71
RNF40-204ENST00000563683 GRTP1Q5TC63 336 aa10.63□□□□□ -0.71
RNF40-204ENST00000563683 ZNF470Q6ECI4 717 aa10.63□□□□□ -0.71
RNF40-204ENST00000563683 PACS1Q6VY07 963 aa10.63□□□□□ -0.71
RNF40-204ENST00000563683 ARCQ7LC44 396 aa10.63□□□□□ -0.71
RNF40-204ENST00000563683 IGDCC3Q8IVU1 814 aa10.63□□□□□ -0.71
RNF40-204ENST00000563683 C10orf107Q8IVU9 208 aa10.63□□□□□ -0.71
RNF40-204ENST00000563683 AHI1Q8N157 1196 aa10.63□□□□□ -0.71
RNF40-204ENST00000563683 ACTRT2Q8TDY3 377 aa10.63□□□□□ -0.71
RNF40-204ENST00000563683 DIS3LQ8TF46 1054 aaKnown RBP10.63□□□□□ -0.71
RNF40-204ENST00000563683 ZNF512Q96ME7 567 aaPredicted RBP10.63□□□□□ -0.71
RNF40-204ENST00000563683 PEBP4Q96S96 227 aa10.63□□□□□ -0.71
RNF40-204ENST00000563683 PNPOQ9NVS9 261 aa10.63□□□□□ -0.71
RNF40-204ENST00000563683 F7P08709 466 aaPredicted RBP10.62□□□□□ -0.71
RNF40-204ENST00000563683 CPOXP36551 454 aa10.62□□□□□ -0.71
RNF40-204ENST00000563683 ALDH1A3P47895 512 aa10.62□□□□□ -0.71
RNF40-204ENST00000563683 HSPA13P48723 471 aa10.62□□□□□ -0.71
RNF40-204ENST00000563683 IL1RL1Q01638 556 aa10.62□□□□□ -0.71
RNF40-204ENST00000563683 ARHGAP1Q07960 439 aa10.62□□□□□ -0.71
RNF40-204ENST00000563683 ZNF252P-AS1Q0IIN9 211 aa10.62□□□□□ -0.71
RNF40-204ENST00000563683 TBL3Q12788 808 aaKnown RBP10.62□□□□□ -0.71
RNF40-204ENST00000563683 SNX17Q15036 470 aa10.62□□□□□ -0.71
RNF40-204ENST00000563683 USP50Q70EL3 339 aaPredicted RBP10.62□□□□□ -0.71
RNF40-204ENST00000563683 MPP5Q8N3R9 675 aa10.62□□□□□ -0.71
RNF40-204ENST00000563683 EME1Q96AY2 570 aa10.62□□□□□ -0.71
RNF40-204ENST00000563683 SMARCD1Q96GM5 515 aa10.62□□□□□ -0.71
RNF40-204ENST00000563683 GCNAQ96QF7 691 aa10.62□□□□□ -0.71
RNF40-204ENST00000563683 CPNE1Q99829 537 aa10.62□□□□□ -0.71
RNF40-204ENST00000563683 OMDQ99983 421 aa10.62□□□□□ -0.71
RNF40-204ENST00000563683 DUSP16Q9BY84 665 aa10.62□□□□□ -0.71
RNF40-204ENST00000563683 USP29Q9HBJ7 922 aa10.62□□□□□ -0.71
RNF40-204ENST00000563683 TBCCD1Q9NVR7 557 aa10.62□□□□□ -0.71
RNF40-204ENST00000563683 NSMCE4AQ9NXX6 385 aa10.62□□□□□ -0.71
RNF40-204ENST00000563683 SIRPGQ9P1W8 387 aa10.62□□□□□ -0.71
RNF40-204ENST00000563683 FAF1Q9UNN5 650 aaPredicted RBP10.62□□□□□ -0.71
RNF40-204ENST00000563683 IPPQ9Y573 584 aa10.62□□□□□ -0.71
RNF40-204ENST00000563683 CSH1P0DML2 217 aa10.62□□□□□ -0.71
RNF40-204ENST00000563683 CSH2P0DML3 217 aa10.62□□□□□ -0.71
RNF40-204ENST00000563683 AXLP30530 894 aa10.62□□□□□ -0.71
RNF40-204ENST00000563683 CCR1P32246 355 aa10.62□□□□□ -0.71
RNF40-204ENST00000563683 GEMP55040 296 aa10.62□□□□□ -0.71
RNF40-204ENST00000563683 CCNIQ14094 377 aa10.62□□□□□ -0.71
RNF40-204ENST00000563683 SOWAHAQ2M3V2 549 aa10.62□□□□□ -0.71
RNF40-204ENST00000563683 NADK2Q4G0N4 442 aa10.62□□□□□ -0.71
RNF40-204ENST00000563683 SPANXN3Q5MJ09 141 aa10.62□□□□□ -0.71
RNF40-204ENST00000563683 NOL9Q5SY16 702 aaKnown RBP10.62□□□□□ -0.71
RNF40-204ENST00000563683 BORAQ6PGQ7 559 aa10.62□□□□□ -0.71
RNF40-204ENST00000563683 SLC26A9Q7LBE3 791 aa10.62□□□□□ -0.71
RNF40-204ENST00000563683 TMC7Q7Z402 723 aa10.62□□□□□ -0.71
RNF40-204ENST00000563683 NUP93Q8N1F7 819 aa10.62□□□□□ -0.71
RNF40-204ENST00000563683 ZNF513Q8N8E2 541 aaPredicted RBP10.62□□□□□ -0.71
RNF40-204ENST00000563683 RNF39Q9H2S5 420 aa10.62□□□□□ -0.71
RNF40-204ENST00000563683 EML4Q9HC35 981 aaKnown RBP10.62□□□□□ -0.71
RNF40-204ENST00000563683 DTLQ9NZJ0 730 aa10.62□□□□□ -0.71
RNF40-204ENST00000563683 CDH22Q9UJ99 828 aa10.62□□□□□ -0.71
RNF40-204ENST00000563683 ZNF180Q9UJW8 692 aa10.62□□□□□ -0.71
RNF40-204ENST00000563683 GOLGA4Q13439 2230 aaKnown RBP10.62□□□□□ -0.71
RNF40-204ENST00000563683 BCLAF3A2AJT9 711 aaKnown RBP10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms