RNA–Protein interactions for RNA: ENST00000563623.5

ABCA3-203, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 1 (best)

Gene ABCA3, Length 3,649 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-203ENST00000563623 PIM2Q9P1W9 311 aa12.03□□□□□ -0.48
ABCA3-203ENST00000563623 ZBTB24O43167 697 aaPredicted RBP12.02□□□□□ -0.48
ABCA3-203ENST00000563623 ASLP04424 464 aa12.02□□□□□ -0.48
ABCA3-203ENST00000563623 BAG6P46379 1132 aa12.02□□□□□ -0.48
ABCA3-203ENST00000563623 CTBP1Q13363 440 aa12.02□□□□□ -0.48
ABCA3-203ENST00000563623 POU6F1Q14863 301 aa12.02□□□□□ -0.48
ABCA3-203ENST00000563623 MYLK3Q32MK0 819 aa12.02□□□□□ -0.48
ABCA3-203ENST00000563623 AGKQ53H12 422 aa12.02□□□□□ -0.48
ABCA3-203ENST00000563623 TMEM79Q9BSE2 394 aa12.02□□□□□ -0.48
ABCA3-203ENST00000563623 SIK2Q9H0K1 926 aa12.02□□□□□ -0.48
ABCA3-203ENST00000563623 CHST12Q9NRB3 414 aa12.02□□□□□ -0.48
ABCA3-203ENST00000563623 CCDC167Q9P0B6 97 aa12.02□□□□□ -0.48
ABCA3-203ENST00000563623 ZDHHC2Q9UIJ5 367 aa12.02□□□□□ -0.48
ABCA3-203ENST00000563623 RAP2CQ9Y3L5 183 aa12.02□□□□□ -0.48
ABCA3-203ENST00000563623 CSADQ9Y600 493 aa12.02□□□□□ -0.48
ABCA3-203ENST00000563623 THSD7AQ9UPZ6 1657 aa12.02□□□□□ -0.49
ABCA3-203ENST00000563623 KCNU1A8MYU2 1149 aa12.02□□□□□ -0.49
ABCA3-203ENST00000563623 HACD1B0YJ81 288 aa12.02□□□□□ -0.49
ABCA3-203ENST00000563623 TIMM44O43615 452 aa12.02□□□□□ -0.49
ABCA3-203ENST00000563623 GABBR2O75899 941 aa12.02□□□□□ -0.49
ABCA3-203ENST00000563623 TFAP2AP05549 437 aa12.02□□□□□ -0.49
ABCA3-203ENST00000563623 PPARGP37231 505 aaPredicted RBP12.02□□□□□ -0.49
ABCA3-203ENST00000563623 NDUFV1P49821 464 aa12.02□□□□□ -0.49
ABCA3-203ENST00000563623 OGFRL1Q5TC84 451 aaPredicted RBP12.02□□□□□ -0.49
ABCA3-203ENST00000563623 STEAP4Q687X5 459 aa12.02□□□□□ -0.49
ABCA3-203ENST00000563623 PIGZQ86VD9 579 aa12.02□□□□□ -0.49
ABCA3-203ENST00000563623 PSTKQ8IV42 348 aaKnown RBP12.02□□□□□ -0.49
ABCA3-203ENST00000563623 MYO1HQ8N1T3 1032 aa12.02□□□□□ -0.49
ABCA3-203ENST00000563623 ZFP28Q8NHY6 868 aa12.02□□□□□ -0.49
ABCA3-203ENST00000563623 ELMO2Q96JJ3 720 aa12.02□□□□□ -0.49
ABCA3-203ENST00000563623 ATXN3LQ9H3M9 355 aa12.02□□□□□ -0.49
ABCA3-203ENST00000563623 PRPF19Q9UMS4 504 aaKnown RBP12.02□□□□□ -0.49
ABCA3-203ENST00000563623 SNX10Q9Y5X0 201 aa12.02□□□□□ -0.49
ABCA3-203ENST00000563623 STRNO43815 780 aa12.01□□□□□ -0.49
ABCA3-203ENST00000563623 VAPBO95292 243 aa12.01□□□□□ -0.49
ABCA3-203ENST00000563623 MPOP05164 745 aa12.01□□□□□ -0.49
ABCA3-203ENST00000563623 ERCC2P18074 760 aa12.01□□□□□ -0.49
ABCA3-203ENST00000563623 NFKB1P19838 968 aa12.01□□□□□ -0.49
ABCA3-203ENST00000563623 PPIDQ08752 370 aaKnown RBP12.01□□□□□ -0.49
ABCA3-203ENST00000563623 PRKAA1Q13131 559 aa12.01□□□□□ -0.49
ABCA3-203ENST00000563623 SNAPC2Q13487 334 aa12.01□□□□□ -0.49
ABCA3-203ENST00000563623 PRPSAP1Q14558 356 aa12.01□□□□□ -0.49
ABCA3-203ENST00000563623 TTLL4Q14679 1199 aa12.01□□□□□ -0.49
ABCA3-203ENST00000563623 STXBP5Q5T5C0 1151 aa12.01□□□□□ -0.49
ABCA3-203ENST00000563623 ZNF618Q5T7W0 954 aa12.01□□□□□ -0.49
ABCA3-203ENST00000563623 IPMKQ8NFU5 416 aa12.01□□□□□ -0.49
ABCA3-203ENST00000563623 RP9Q8TA86 221 aaKnown RBP12.01□□□□□ -0.49
ABCA3-203ENST00000563623 GOLGA2P5Q9HBQ8 144 aa12.01□□□□□ -0.49
ABCA3-203ENST00000563623 XPR1Q9UBH6 696 aa12.01□□□□□ -0.49
ABCA3-203ENST00000563623 STAP1Q9ULZ2 295 aa12.01□□□□□ -0.49
ABCA3-203ENST00000563623 AURKCQ9UQB9 309 aa12.01□□□□□ -0.49
ABCA3-203ENST00000563623 A0A1B0GTW7 788 aa12.01□□□□□ -0.49
ABCA3-203ENST00000563623 ZNF195O14628 629 aa12.01□□□□□ -0.49
ABCA3-203ENST00000563623 AKAP10O43572 662 aa12.01□□□□□ -0.49
ABCA3-203ENST00000563623 ALDH1A2O94788 518 aa12.01□□□□□ -0.49
ABCA3-203ENST00000563623 JUNP05412 331 aaKnown RBP12.01□□□□□ -0.49
ABCA3-203ENST00000563623 TSPAN8P19075 237 aa12.01□□□□□ -0.49
ABCA3-203ENST00000563623 HDCP19113 662 aa12.01□□□□□ -0.49
ABCA3-203ENST00000563623 NMBRP28336 390 aa12.01□□□□□ -0.49
ABCA3-203ENST00000563623 PTPN9P43378 593 aa12.01□□□□□ -0.49
ABCA3-203ENST00000563623 CDKL1Q00532 357 aa12.01□□□□□ -0.49
ABCA3-203ENST00000563623 INCA1Q0VD86 236 aa12.01□□□□□ -0.49
ABCA3-203ENST00000563623 LBX2Q6XYB7 198 aa12.01□□□□□ -0.49
ABCA3-203ENST00000563623 RPS27LQ71UM5 84 aaKnown RBP12.01□□□□□ -0.49
ABCA3-203ENST00000563623 SLC26A9Q7LBE3 791 aa12.01□□□□□ -0.49
ABCA3-203ENST00000563623 HAPLN3Q96S86 360 aa12.01□□□□□ -0.49
ABCA3-203ENST00000563623 TRPC7Q9HCX4 862 aa12.01□□□□□ -0.49
ABCA3-203ENST00000563623 PTTG2Q9NZH5 202 aa12.01□□□□□ -0.49
ABCA3-203ENST00000563623 ADAMTS5Q9UNA0 930 aa12.01□□□□□ -0.49
ABCA3-203ENST00000563623 NEMP2A6NFY4 417 aa12.01□□□□□ -0.49
ABCA3-203ENST00000563623 SAC3D1A6NKF1 404 aa12.01□□□□□ -0.49
ABCA3-203ENST00000563623 G3V2L1 256 aa12.01□□□□□ -0.49
ABCA3-203ENST00000563623 DDHD2O94830 711 aa12.01□□□□□ -0.49
ABCA3-203ENST00000563623 PRKCGP05129 697 aa12.01□□□□□ -0.49
ABCA3-203ENST00000563623 FUT4P22083 530 aa12.01□□□□□ -0.49
ABCA3-203ENST00000563623 IL23RQ5VWK5 629 aa12.01□□□□□ -0.49
ABCA3-203ENST00000563623 ZFP1Q6P2D0 407 aa12.01□□□□□ -0.49
ABCA3-203ENST00000563623 PLPPR4Q7Z2D5 763 aa12.01□□□□□ -0.49
ABCA3-203ENST00000563623 KLRG1Q96E93 195 aa12.01□□□□□ -0.49
ABCA3-203ENST00000563623 ZFRQ96KR1 1074 aaKnown RBP12.01□□□□□ -0.49
ABCA3-203ENST00000563623 CIB1Q99828 191 aa12.01□□□□□ -0.49
ABCA3-203ENST00000563623 MRPS26Q9BYN8 205 aaKnown RBP12.01□□□□□ -0.49
ABCA3-203ENST00000563623 THEGQ9P2T0 379 aa12.01□□□□□ -0.49
ABCA3-203ENST00000563623 DFFAO00273 331 aa12□□□□□ -0.49
ABCA3-203ENST00000563623 LSM1O15116 133 aaKnown RBP12□□□□□ -0.49
ABCA3-203ENST00000563623 NUMBP49757 651 aa12□□□□□ -0.49
ABCA3-203ENST00000563623 ADARP55265 1226 aaKnown RBP12□□□□□ -0.49
ABCA3-203ENST00000563623 NAB1Q13506 487 aa12□□□□□ -0.49
ABCA3-203ENST00000563623 DALRD3Q5D0E6 543 aaKnown RBP12□□□□□ -0.49
ABCA3-203ENST00000563623 LIPMQ5VYY2 423 aa12□□□□□ -0.49
ABCA3-203ENST00000563623 CTU1Q7Z7A3 348 aaKnown RBP12□□□□□ -0.49
ABCA3-203ENST00000563623 RYBPQ8N488 228 aaPredicted RBP12□□□□□ -0.49
ABCA3-203ENST00000563623 ANKRD52Q8NB46 1076 aa12□□□□□ -0.49
ABCA3-203ENST00000563623 TSPAN14Q8NG11 270 aa12□□□□□ -0.49
ABCA3-203ENST00000563623 AFG1LQ8WV93 481 aa12□□□□□ -0.49
ABCA3-203ENST00000563623 LRTOMTQ8WZ04 291 aa12□□□□□ -0.49
ABCA3-203ENST00000563623 PRICKLE1Q96MT3 831 aaPredicted RBP12□□□□□ -0.49
ABCA3-203ENST00000563623 DCUN1D5Q9BTE7 237 aa12□□□□□ -0.49
ABCA3-203ENST00000563623 ELP3Q9H9T3 547 aa12□□□□□ -0.49
ABCA3-203ENST00000563623 ACOT9Q9Y305 439 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms