RNA–Protein interactions for RNA: ENST00000563404.1

HDGFL3-203, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-203ENST00000563404 RRM1P23921 792 aa17.22■□□□□ 0.35
HDGFL3-203ENST00000563404 EIF2S3P41091 472 aaKnown RBP17.22■□□□□ 0.35
HDGFL3-203ENST00000563404 ABCG1P45844 678 aa17.22■□□□□ 0.35
HDGFL3-203ENST00000563404 INSM1Q01101 510 aaPredicted RBP17.22■□□□□ 0.35
HDGFL3-203ENST00000563404 OVGP1Q12889 678 aa17.22■□□□□ 0.35
HDGFL3-203ENST00000563404 RTP5Q14D33 572 aa17.22■□□□□ 0.35
HDGFL3-203ENST00000563404 SETMARQ53H47 684 aaPredicted RBP17.22■□□□□ 0.35
HDGFL3-203ENST00000563404 DPY19L2P1Q6NXN4 242 aa17.22■□□□□ 0.35
HDGFL3-203ENST00000563404 CHST14Q8NCH0 376 aa17.22■□□□□ 0.35
HDGFL3-203ENST00000563404 PPP1R9BQ96SB3 815 aa17.22■□□□□ 0.35
HDGFL3-203ENST00000563404 TKTL2Q9H0I9 626 aa17.22■□□□□ 0.35
HDGFL3-203ENST00000563404 MUC3BQ9H195 1237 aa17.22■□□□□ 0.35
HDGFL3-203ENST00000563404 FZD3Q9NPG1 666 aa17.22■□□□□ 0.35
HDGFL3-203ENST00000563404 UCKL1Q9NWZ5 548 aa17.22■□□□□ 0.35
HDGFL3-203ENST00000563404 VPS51Q9UID3 782 aa17.22■□□□□ 0.35
HDGFL3-203ENST00000563404 A0A0D9SEW6 157 aa17.21■□□□□ 0.35
HDGFL3-203ENST00000563404 A0A1W2PQU0 124 aa17.21■□□□□ 0.35
HDGFL3-203ENST00000563404 GTPBP10A4D1E9 387 aaKnown RBP17.21■□□□□ 0.35
HDGFL3-203ENST00000563404 SLC31A1O15431 190 aa17.21■□□□□ 0.35
HDGFL3-203ENST00000563404 SIGLEC6O43699 453 aa17.21■□□□□ 0.35
HDGFL3-203ENST00000563404 MAGEC1O60732 1142 aa17.21■□□□□ 0.35
HDGFL3-203ENST00000563404 GLDCP23378 1020 aa17.21■□□□□ 0.35
HDGFL3-203ENST00000563404 ACP1P24666 158 aa17.21■□□□□ 0.35
HDGFL3-203ENST00000563404 CHRNA3P32297 505 aa17.21■□□□□ 0.35
HDGFL3-203ENST00000563404 CXCR3P49682 368 aa17.21■□□□□ 0.35
HDGFL3-203ENST00000563404 PTK2Q05397 1052 aa17.21■□□□□ 0.35
HDGFL3-203ENST00000563404 ILKQ13418 452 aa17.21■□□□□ 0.35
HDGFL3-203ENST00000563404 ZNF284Q2VY69 593 aa17.21■□□□□ 0.35
HDGFL3-203ENST00000563404 LINGO4Q6UY18 593 aa17.21■□□□□ 0.35
HDGFL3-203ENST00000563404 ATP11CQ8NB49 1132 aa17.21■□□□□ 0.35
HDGFL3-203ENST00000563404 RFFLQ8WZ73 363 aa17.21■□□□□ 0.35
HDGFL3-203ENST00000563404 NT5C3BQ969T7 300 aa17.21■□□□□ 0.35
HDGFL3-203ENST00000563404 KLHDC7BQ96G42 594 aa17.21■□□□□ 0.35
HDGFL3-203ENST00000563404 NOX5Q96PH1 765 aa17.21■□□□□ 0.35
HDGFL3-203ENST00000563404 NRSN2Q9GZP1 204 aa17.21■□□□□ 0.35
HDGFL3-203ENST00000563404 KIAA1468Q9P260 1216 aa17.21■□□□□ 0.35
HDGFL3-203ENST00000563404 DNAJC12Q9UKB3 198 aa17.21■□□□□ 0.35
HDGFL3-203ENST00000563404 ZFR2Q9UPR6 939 aaKnown RBP17.21■□□□□ 0.35
HDGFL3-203ENST00000563404 RAI2Q9Y5P3 530 aa17.21■□□□□ 0.35
HDGFL3-203ENST00000563404 AK5Q9Y6K8 562 aa17.21■□□□□ 0.35
HDGFL3-203ENST00000563404 FAM170AA1A519 330 aa17.2■□□□□ 0.34
HDGFL3-203ENST00000563404 DRGXA6NNA5 263 aa17.2■□□□□ 0.34
HDGFL3-203ENST00000563404 KPNA3O00505 521 aaPredicted RBP17.2■□□□□ 0.34
HDGFL3-203ENST00000563404 ZNF821O75541 412 aaPredicted RBP17.2■□□□□ 0.34
HDGFL3-203ENST00000563404 RHOCP08134 193 aa17.2■□□□□ 0.34
HDGFL3-203ENST00000563404 THEGLP0DJG4 465 aa17.2■□□□□ 0.34
HDGFL3-203ENST00000563404 GIMD1P0DJR0 217 aa17.2■□□□□ 0.34
HDGFL3-203ENST00000563404 DGKAP23743 735 aa17.2■□□□□ 0.34
HDGFL3-203ENST00000563404 KRT9P35527 623 aa17.2■□□□□ 0.34
HDGFL3-203ENST00000563404 RNASE9P60153 205 aaKnown RBP17.2■□□□□ 0.34
HDGFL3-203ENST00000563404 MTA1Q13330 715 aa17.2■□□□□ 0.34
HDGFL3-203ENST00000563404 TMIEQ8NEW7 156 aa17.2■□□□□ 0.34
HDGFL3-203ENST00000563404 TBCBQ99426 244 aa17.2■□□□□ 0.34
HDGFL3-203ENST00000563404 WDCPQ9H6R7 721 aa17.2■□□□□ 0.34
HDGFL3-203ENST00000563404 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.2■□□□□ 0.34
HDGFL3-203ENST00000563404 MPP6Q9NZW5 540 aa17.2■□□□□ 0.34
HDGFL3-203ENST00000563404 SULT1E1P49888 294 aa17.19■□□□□ 0.34
HDGFL3-203ENST00000563404 CLDN2P57739 230 aa17.19■□□□□ 0.34
HDGFL3-203ENST00000563404 KRT83P78385 493 aa17.19■□□□□ 0.34
HDGFL3-203ENST00000563404 KCNMA1Q12791 1236 aa17.19■□□□□ 0.34
HDGFL3-203ENST00000563404 ZNF211Q13398 564 aaPredicted RBP17.19■□□□□ 0.34
HDGFL3-203ENST00000563404 CAMK4Q16566 473 aa17.19■□□□□ 0.34
HDGFL3-203ENST00000563404 BRMS1LQ5PSV4 323 aa17.19■□□□□ 0.34
HDGFL3-203ENST00000563404 SEL1L3Q68CR1 1132 aa17.19■□□□□ 0.34
HDGFL3-203ENST00000563404 TRNP1Q6NT89 227 aa17.19■□□□□ 0.34
HDGFL3-203ENST00000563404 TFAP2DQ7Z6R9 452 aa17.19■□□□□ 0.34
HDGFL3-203ENST00000563404 HORMAD1Q86X24 394 aa17.19■□□□□ 0.34
HDGFL3-203ENST00000563404 FAM71AQ8IYT1 594 aa17.19■□□□□ 0.34
HDGFL3-203ENST00000563404 SLC22A18ASQ8N1D0 253 aa17.19■□□□□ 0.34
HDGFL3-203ENST00000563404 CACTIN-AS1Q8N1I8 211 aa17.19■□□□□ 0.34
HDGFL3-203ENST00000563404 DCBLD1Q8N8Z6 715 aa17.19■□□□□ 0.34
HDGFL3-203ENST00000563404 OR13H1Q8NG92 308 aa17.19■□□□□ 0.34
HDGFL3-203ENST00000563404 OR7D4Q8NG98 312 aa17.19■□□□□ 0.34
HDGFL3-203ENST00000563404 PGAP3Q96FM1 320 aaPredicted RBP17.19■□□□□ 0.34
HDGFL3-203ENST00000563404 C2orf49Q9BVC5 232 aaPredicted RBP17.19■□□□□ 0.34
HDGFL3-203ENST00000563404 TNKS2Q9H2K2 1166 aa17.19■□□□□ 0.34
HDGFL3-203ENST00000563404 PRORYQ9H606 182 aa17.19■□□□□ 0.34
HDGFL3-203ENST00000563404 SYNCQ9H7C4 482 aa17.19■□□□□ 0.34
HDGFL3-203ENST00000563404 KLHL11Q9NVR0 708 aa17.19■□□□□ 0.34
HDGFL3-203ENST00000563404 RRN3Q9NYV6 651 aa17.19■□□□□ 0.34
HDGFL3-203ENST00000563404 ZNF212Q9UDV6 495 aa17.19■□□□□ 0.34
HDGFL3-203ENST00000563404 IGLV3-10A0A075B6K4 115 aa17.18■□□□□ 0.34
HDGFL3-203ENST00000563404 BRINP1O60477 761 aa17.18■□□□□ 0.34
HDGFL3-203ENST00000563404 MTIF2P46199 727 aaKnown RBP17.18■□□□□ 0.34
HDGFL3-203ENST00000563404 ARSIQ5FYB1 569 aa17.18■□□□□ 0.34
HDGFL3-203ENST00000563404 NEK5Q6P3R8 708 aa17.18■□□□□ 0.34
HDGFL3-203ENST00000563404 C22orf39Q6P5X5 142 aa17.18■□□□□ 0.34
HDGFL3-203ENST00000563404 GCNT7Q6ZNI0 430 aa17.18■□□□□ 0.34
HDGFL3-203ENST00000563404 DPY19L3Q6ZPD9 716 aa17.18■□□□□ 0.34
HDGFL3-203ENST00000563404 SETD3Q86TU7 594 aaPredicted RBP17.18■□□□□ 0.34
HDGFL3-203ENST00000563404 ZDHHC17Q8IUH5 632 aa17.18■□□□□ 0.34
HDGFL3-203ENST00000563404 DCAF4L2Q8NA75 395 aa17.18■□□□□ 0.34
HDGFL3-203ENST00000563404 OR4C6Q8NH72 309 aa17.18■□□□□ 0.34
HDGFL3-203ENST00000563404 SNIP1Q8TAD8 396 aaKnown RBP17.18■□□□□ 0.34
HDGFL3-203ENST00000563404 GRIN3AQ8TCU5 1115 aa17.18■□□□□ 0.34
HDGFL3-203ENST00000563404 CLCA2Q9UQC9 943 aa17.18■□□□□ 0.34
HDGFL3-203ENST00000563404 KALRNO60229 2985 aa17.18■□□□□ 0.34
HDGFL3-203ENST00000563404 FFAR2O15552 330 aa17.17■□□□□ 0.34
HDGFL3-203ENST00000563404 LEFTY1O75610 366 aa17.17■□□□□ 0.34
HDGFL3-203ENST00000563404 ZMPSTE24O75844 475 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms