RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 TEX26Q8N6G2 289 aa18.39■□□□□ 0.54
COMMD4-208ENST00000563220 OR7D4Q8NG98 312 aa18.39■□□□□ 0.54
COMMD4-208ENST00000563220 ARNTL2Q8WYA1 636 aa18.39■□□□□ 0.54
COMMD4-208ENST00000563220 PABPC5Q96DU9 382 aaKnown RBP18.39■□□□□ 0.54
COMMD4-208ENST00000563220 XPO6Q96QU8 1125 aaKnown RBP18.39■□□□□ 0.54
COMMD4-208ENST00000563220 SMG9Q9H0W8 520 aaKnown RBP18.39■□□□□ 0.54
COMMD4-208ENST00000563220 MAGEH1Q9H213 219 aa18.39■□□□□ 0.54
COMMD4-208ENST00000563220 CFAP97Q9P2B7 532 aa18.39■□□□□ 0.54
COMMD4-208ENST00000563220 MAD1L1Q9Y6D9 718 aa18.39■□□□□ 0.54
COMMD4-208ENST00000563220 SHROOM3Q8TF72 1996 aa18.39■□□□□ 0.54
COMMD4-208ENST00000563220 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.39■□□□□ 0.53
COMMD4-208ENST00000563220 TCRBV9S1A1TA0A576 114 aa18.39■□□□□ 0.53
COMMD4-208ENST00000563220 CCDC85CA6NKD9 419 aa18.39■□□□□ 0.53
COMMD4-208ENST00000563220 SDR42E2A6NKP2 422 aa18.39■□□□□ 0.53
COMMD4-208ENST00000563220 ERI2A8K979 691 aaKnown RBP18.39■□□□□ 0.53
COMMD4-208ENST00000563220 POC1B-GALNT4F8VUJ3 575 aa18.39■□□□□ 0.53
COMMD4-208ENST00000563220 AGTP01019 485 aa18.39■□□□□ 0.53
COMMD4-208ENST00000563220 IVLP07476 585 aa18.39■□□□□ 0.53
COMMD4-208ENST00000563220 NR1D1P20393 614 aa18.39■□□□□ 0.53
COMMD4-208ENST00000563220 NTHL1P78549 312 aa18.39■□□□□ 0.53
COMMD4-208ENST00000563220 CRADDP78560 199 aa18.39■□□□□ 0.53
COMMD4-208ENST00000563220 ZNF177Q13360 481 aaPredicted RBP18.39■□□□□ 0.53
COMMD4-208ENST00000563220 PRPSAP1Q14558 356 aa18.39■□□□□ 0.53
COMMD4-208ENST00000563220 SLC5A9Q2M3M2 681 aa18.39■□□□□ 0.53
COMMD4-208ENST00000563220 MARC1Q5VT66 337 aa18.39■□□□□ 0.53
COMMD4-208ENST00000563220 HTR3DQ70Z44 454 aa18.39■□□□□ 0.53
COMMD4-208ENST00000563220 CHST9Q7L1S5 443 aa18.39■□□□□ 0.53
COMMD4-208ENST00000563220 ACSS3Q9H6R3 686 aa18.39■□□□□ 0.53
COMMD4-208ENST00000563220 CASS4Q9NQ75 786 aa18.39■□□□□ 0.53
COMMD4-208ENST00000563220 HCFC2Q9Y5Z7 792 aa18.39■□□□□ 0.53
COMMD4-208ENST00000563220 A0A1B0GVM2 712 aa18.38■□□□□ 0.53
COMMD4-208ENST00000563220 TCAF2A6NFQ2 919 aa18.38■□□□□ 0.53
COMMD4-208ENST00000563220 FOXO6A8MYZ6 492 aa18.38■□□□□ 0.53
COMMD4-208ENST00000563220 PRAMEF11O60813 436 aa18.38■□□□□ 0.53
COMMD4-208ENST00000563220 CPP00450 1065 aa18.38■□□□□ 0.53
COMMD4-208ENST00000563220 HPDP32754 393 aaPredicted RBP18.38■□□□□ 0.53
COMMD4-208ENST00000563220 IFNAR2P48551 515 aa18.38■□□□□ 0.53
COMMD4-208ENST00000563220 TEAD2Q15562 447 aa18.38■□□□□ 0.53
COMMD4-208ENST00000563220 GPR158Q5T848 1215 aa18.38■□□□□ 0.53
COMMD4-208ENST00000563220 UNC5AQ6ZN44 842 aa18.38■□□□□ 0.53
COMMD4-208ENST00000563220 FAM217AQ8IXS0 508 aa18.38■□□□□ 0.53
COMMD4-208ENST00000563220 APOL2Q9BQE5 337 aa18.38■□□□□ 0.53
COMMD4-208ENST00000563220 NT5MQ9NPB1 228 aa18.38■□□□□ 0.53
COMMD4-208ENST00000563220 TBK1Q9UHD2 729 aa18.38■□□□□ 0.53
COMMD4-208ENST00000563220 LGALS13Q9UHV8 139 aa18.38■□□□□ 0.53
COMMD4-208ENST00000563220 TBC1D30Q9Y2I9 924 aa18.38■□□□□ 0.53
COMMD4-208ENST00000563220 OBSL1O75147 1896 aa18.38■□□□□ 0.53
COMMD4-208ENST00000563220 LEFTY2O00292 366 aa18.37■□□□□ 0.53
COMMD4-208ENST00000563220 TBL1XO60907 577 aa18.37■□□□□ 0.53
COMMD4-208ENST00000563220 CDH16O75309 829 aa18.37■□□□□ 0.53
COMMD4-208ENST00000563220 C1QAP02745 245 aa18.37■□□□□ 0.53
COMMD4-208ENST00000563220 HNRNPA1P09651 372 aaKnown RBP eCLIP18.37■□□□□ 0.53
COMMD4-208ENST00000563220 PFKLP17858 780 aa18.37■□□□□ 0.53
COMMD4-208ENST00000563220 HOXD9P28356 352 aaPredicted RBP18.37■□□□□ 0.53
COMMD4-208ENST00000563220 HNRNPH2P55795 449 aaKnown RBP18.37■□□□□ 0.53
COMMD4-208ENST00000563220 EMC10Q5UCC4 262 aa18.37■□□□□ 0.53
COMMD4-208ENST00000563220 PRPF39Q86UA1 669 aaKnown RBP18.37■□□□□ 0.53
COMMD4-208ENST00000563220 TDRPQ86YL5 185 aa18.37■□□□□ 0.53
COMMD4-208ENST00000563220 MRRFQ96E11 262 aaKnown RBP18.37■□□□□ 0.53
COMMD4-208ENST00000563220 TMA16Q96EY4 203 aaKnown RBP18.37■□□□□ 0.53
COMMD4-208ENST00000563220 NKX2-4Q9H2Z4 354 aa18.37■□□□□ 0.53
COMMD4-208ENST00000563220 LRRC40Q9H9A6 602 aa18.37■□□□□ 0.53
COMMD4-208ENST00000563220 PDFQ9HBH1 243 aa18.37■□□□□ 0.53
COMMD4-208ENST00000563220 AAR2Q9Y312 384 aaKnown RBP18.37■□□□□ 0.53
COMMD4-208ENST00000563220 SH3BP1Q9Y3L3 701 aa18.37■□□□□ 0.53
COMMD4-208ENST00000563220 ACTL7AQ9Y615 435 aa18.37■□□□□ 0.53
COMMD4-208ENST00000563220 DOCK6Q96HP0 2047 aa18.37■□□□□ 0.53
COMMD4-208ENST00000563220 ILVBLA1L0T0 632 aa18.37■□□□□ 0.53
COMMD4-208ENST00000563220 PSMD3O43242 534 aa18.37■□□□□ 0.53
COMMD4-208ENST00000563220 SPAG6O75602 509 aa18.37■□□□□ 0.53
COMMD4-208ENST00000563220 NEBLO76041 1014 aa18.37■□□□□ 0.53
COMMD4-208ENST00000563220 ATP1A2P50993 1020 aa18.37■□□□□ 0.53
COMMD4-208ENST00000563220 MAXP61244 160 aa18.37■□□□□ 0.53
COMMD4-208ENST00000563220 PPARDQ03181 441 aa18.37■□□□□ 0.53
COMMD4-208ENST00000563220 TNK2Q07912 1038 aa18.37■□□□□ 0.53
COMMD4-208ENST00000563220 COL13A1Q5TAT6 717 aaPredicted RBP18.37■□□□□ 0.53
COMMD4-208ENST00000563220 CXorf57Q6NSI4 855 aaKnown RBP18.37■□□□□ 0.53
COMMD4-208ENST00000563220 KDM7AQ6ZMT4 941 aa18.37■□□□□ 0.53
COMMD4-208ENST00000563220 SETD3Q86TU7 594 aaPredicted RBP18.37■□□□□ 0.53
COMMD4-208ENST00000563220 BBS7Q8IWZ6 715 aa18.37■□□□□ 0.53
COMMD4-208ENST00000563220 PGBD5Q8N414 524 aa18.37■□□□□ 0.53
COMMD4-208ENST00000563220 ZNF707Q96C28 371 aaPredicted RBP18.37■□□□□ 0.53
COMMD4-208ENST00000563220 STAMBPL1Q96FJ0 436 aa18.37■□□□□ 0.53
COMMD4-208ENST00000563220 SPON2Q9BUD6 331 aa18.37■□□□□ 0.53
COMMD4-208ENST00000563220 PRKD2Q9BZL6 878 aa18.37■□□□□ 0.53
COMMD4-208ENST00000563220 SYBUQ9NX95 663 aa18.37■□□□□ 0.53
COMMD4-208ENST00000563220 LSM7Q9UK45 103 aaKnown RBP18.37■□□□□ 0.53
COMMD4-208ENST00000563220 ARHGAP26Q9UNA1 814 aa18.37■□□□□ 0.53
COMMD4-208ENST00000563220 CCL26Q9Y258 94 aa18.37■□□□□ 0.53
COMMD4-208ENST00000563220 MTCL1Q9Y4B5 1905 aaKnown RBP18.36■□□□□ 0.53
COMMD4-208ENST00000563220 CCDC195A0A1B0GUA6 201 aa18.36■□□□□ 0.53
COMMD4-208ENST00000563220 XYLBO75191 536 aa18.36■□□□□ 0.53
COMMD4-208ENST00000563220 ANXA9O76027 345 aa18.36■□□□□ 0.53
COMMD4-208ENST00000563220 FGF19O95750 216 aa18.36■□□□□ 0.53
COMMD4-208ENST00000563220 RHOCP08134 193 aa18.36■□□□□ 0.53
COMMD4-208ENST00000563220 GLDCP23378 1020 aa18.36■□□□□ 0.53
COMMD4-208ENST00000563220 ETFBP38117 255 aa18.36■□□□□ 0.53
COMMD4-208ENST00000563220 GEMIN4P57678 1058 aaKnown RBP18.36■□□□□ 0.53
COMMD4-208ENST00000563220 NIPAL4Q0D2K0 466 aa18.36■□□□□ 0.53
COMMD4-208ENST00000563220 IHHQ14623 411 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms