RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 RHAGQ02094 409 aa3.54□□□□□ -1.84
SHCBP1-202ENST00000563219 PGM5Q15124 567 aa3.54□□□□□ -1.84
SHCBP1-202ENST00000563219 TRIP6Q15654 476 aaKnown RBP3.54□□□□□ -1.84
SHCBP1-202ENST00000563219 GPR68Q15743 365 aa3.54□□□□□ -1.84
SHCBP1-202ENST00000563219 GXYLT1Q4G148 440 aa3.54□□□□□ -1.84
SHCBP1-202ENST00000563219 C10orf76Q5T2E6 689 aa3.54□□□□□ -1.84
SHCBP1-202ENST00000563219 MZT2BQ6NZ67 158 aa3.54□□□□□ -1.84
SHCBP1-202ENST00000563219 MTFR2Q6P444 385 aa3.54□□□□□ -1.84
SHCBP1-202ENST00000563219 SLC30A9Q6PML9 568 aa3.54□□□□□ -1.84
SHCBP1-202ENST00000563219 DSTYKQ6XUX3 929 aa3.54□□□□□ -1.84
SHCBP1-202ENST00000563219 R3HCC1LQ7Z5L2 792 aaKnown RBP3.54□□□□□ -1.84
SHCBP1-202ENST00000563219 GALNT7Q86SF2 657 aa3.54□□□□□ -1.84
SHCBP1-202ENST00000563219 KLBQ86Z14 1044 aa3.54□□□□□ -1.84
SHCBP1-202ENST00000563219 CNTROBQ8N137 903 aa3.54□□□□□ -1.84
SHCBP1-202ENST00000563219 TDRD7Q8NHU6 1098 aaKnown RBP3.54□□□□□ -1.84
SHCBP1-202ENST00000563219 TBC1D22AQ8WUA7 517 aa3.54□□□□□ -1.84
SHCBP1-202ENST00000563219 KCNJ9Q92806 393 aa3.54□□□□□ -1.84
SHCBP1-202ENST00000563219 COQ8BQ96D53 544 aa3.54□□□□□ -1.84
SHCBP1-202ENST00000563219 MASTLQ96GX5 879 aa3.54□□□□□ -1.84
SHCBP1-202ENST00000563219 SPRTNQ9H040 489 aaPredicted RBP3.54□□□□□ -1.84
SHCBP1-202ENST00000563219 SLC25A18Q9H1K4 315 aa3.54□□□□□ -1.84
SHCBP1-202ENST00000563219 MROH8Q9H579 483 aa3.54□□□□□ -1.84
SHCBP1-202ENST00000563219 JMJD4Q9H9V9 463 aa3.54□□□□□ -1.84
SHCBP1-202ENST00000563219 IL21RQ9HBE5 538 aa3.54□□□□□ -1.84
SHCBP1-202ENST00000563219 PAPOLBQ9NRJ5 636 aaKnown RBP3.54□□□□□ -1.84
SHCBP1-202ENST00000563219 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.54□□□□□ -1.84
SHCBP1-202ENST00000563219 THAP1Q9NVV9 213 aa3.54□□□□□ -1.84
SHCBP1-202ENST00000563219 TMEM248Q9NWD8 314 aa3.54□□□□□ -1.84
SHCBP1-202ENST00000563219 TUBA8Q9NY65 449 aaPredicted RBP3.54□□□□□ -1.84
SHCBP1-202ENST00000563219 ELOVL5Q9NYP7 299 aa3.54□□□□□ -1.84
SHCBP1-202ENST00000563219 KLQ9UEF7 1012 aa3.54□□□□□ -1.84
SHCBP1-202ENST00000563219 IPO11Q9UI26 975 aaKnown RBP3.54□□□□□ -1.84
SHCBP1-202ENST00000563219 CD207Q9UJ71 328 aa3.54□□□□□ -1.84
SHCBP1-202ENST00000563219 TBX20Q9UMR3 447 aa3.54□□□□□ -1.84
SHCBP1-202ENST00000563219 TMEM98Q9Y2Y6 226 aa3.54□□□□□ -1.84
SHCBP1-202ENST00000563219 ITIH6Q6UXX5 1313 aa3.53□□□□□ -1.84
SHCBP1-202ENST00000563219 F8W810 466 aa3.53□□□□□ -1.84
SHCBP1-202ENST00000563219 TCERG1O14776 1098 aaKnown RBP3.53□□□□□ -1.84
SHCBP1-202ENST00000563219 DHX16O60231 1041 aaKnown RBP3.53□□□□□ -1.84
SHCBP1-202ENST00000563219 ZNF500O60304 480 aaPredicted RBP3.53□□□□□ -1.84
SHCBP1-202ENST00000563219 TLR2O60603 784 aa3.53□□□□□ -1.84
SHCBP1-202ENST00000563219 TIPRLO75663 272 aa3.53□□□□□ -1.84
SHCBP1-202ENST00000563219 WEE2P0C1S8 567 aa3.53□□□□□ -1.84
SHCBP1-202ENST00000563219 CYP4B1P13584 511 aa3.53□□□□□ -1.84
SHCBP1-202ENST00000563219 CD72P21854 359 aa3.53□□□□□ -1.84
SHCBP1-202ENST00000563219 ARHGAP25P42331 645 aa3.53□□□□□ -1.84
SHCBP1-202ENST00000563219 PAFAH1B1P43034 410 aa3.53□□□□□ -1.84
SHCBP1-202ENST00000563219 NR4A2P43354 598 aa3.53□□□□□ -1.84
SHCBP1-202ENST00000563219 HARS2P49590 506 aaKnown RBP3.53□□□□□ -1.84
SHCBP1-202ENST00000563219 CCR9P51686 369 aa3.53□□□□□ -1.84
SHCBP1-202ENST00000563219 EIF5P55010 431 aaKnown RBP3.53□□□□□ -1.84
SHCBP1-202ENST00000563219 VAMP2P63027 116 aa3.53□□□□□ -1.84
SHCBP1-202ENST00000563219 ID2Q02363 134 aa3.53□□□□□ -1.84
SHCBP1-202ENST00000563219 ZBTB16Q05516 673 aa3.53□□□□□ -1.84
SHCBP1-202ENST00000563219 SRSF1Q07955 248 aaKnown RBP eCLIP3.53□□□□□ -1.84
SHCBP1-202ENST00000563219 PLK5Q496M5 336 aa3.53□□□□□ -1.84
SHCBP1-202ENST00000563219 RUNDC3AQ59EK9 446 aa3.53□□□□□ -1.84
SHCBP1-202ENST00000563219 WDR45BQ5MNZ6 344 aa3.53□□□□□ -1.84
SHCBP1-202ENST00000563219 UBAP2Q5T6F2 1119 aaKnown RBP3.53□□□□□ -1.84
SHCBP1-202ENST00000563219 AWAT2Q6E213 333 aa3.53□□□□□ -1.84
SHCBP1-202ENST00000563219 ISM2Q6H9L7 571 aa3.53□□□□□ -1.84
SHCBP1-202ENST00000563219 LRIG3Q6UXM1 1119 aa3.53□□□□□ -1.84
SHCBP1-202ENST00000563219 KRBA2Q6ZNG9 492 aa3.53□□□□□ -1.84
SHCBP1-202ENST00000563219 BRSK2Q8IWQ3 736 aa3.53□□□□□ -1.84
SHCBP1-202ENST00000563219 PIGOQ8TEQ8 1089 aa3.53□□□□□ -1.84
SHCBP1-202ENST00000563219 C2CD4CQ8TF44 421 aa3.53□□□□□ -1.84
SHCBP1-202ENST00000563219 CENPIQ92674 756 aaPredicted RBP3.53□□□□□ -1.84
SHCBP1-202ENST00000563219 CUL5Q93034 780 aa3.53□□□□□ -1.84
SHCBP1-202ENST00000563219 KIF1BPQ96EK5 621 aa3.53□□□□□ -1.84
SHCBP1-202ENST00000563219 APOPT1Q96IL0 206 aa3.53□□□□□ -1.84
SHCBP1-202ENST00000563219 TUBB6Q9BUF5 446 aa3.53□□□□□ -1.84
SHCBP1-202ENST00000563219 TRIM31Q9BZY9 425 aa3.53□□□□□ -1.84
SHCBP1-202ENST00000563219 USP44Q9H0E7 712 aa3.53□□□□□ -1.84
SHCBP1-202ENST00000563219 STN1Q9H668 368 aaKnown RBP3.53□□□□□ -1.84
SHCBP1-202ENST00000563219 Q9N2J8 555 aa3.53□□□□□ -1.84
SHCBP1-202ENST00000563219 TBC1D22BQ9NU19 505 aa3.53□□□□□ -1.84
SHCBP1-202ENST00000563219 SLC25A13Q9UJS0 675 aa3.53□□□□□ -1.84
SHCBP1-202ENST00000563219 AGO2Q9UKV8 859 aaKnown RBP3.53□□□□□ -1.84
SHCBP1-202ENST00000563219 TNFSF13BQ9Y275 285 aa3.53□□□□□ -1.84
SHCBP1-202ENST00000563219 GDAQ9Y2T3 454 aa3.53□□□□□ -1.84
SHCBP1-202ENST00000563219 TRBV5-3A0A0A0MS03 114 aa3.52□□□□□ -1.85
SHCBP1-202ENST00000563219 KIR2DS5A0A0G2JLQ3 304 aa3.52□□□□□ -1.85
SHCBP1-202ENST00000563219 TMEM247A6NEH6 219 aa3.52□□□□□ -1.85
SHCBP1-202ENST00000563219 PGPEP1LA6NFU8 196 aa3.52□□□□□ -1.85
SHCBP1-202ENST00000563219 C17orf100A8MU93 164 aa3.52□□□□□ -1.85
SHCBP1-202ENST00000563219 KIR2DS3K7RE56 304 aa3.52□□□□□ -1.85
SHCBP1-202ENST00000563219 TNPO2O14787 897 aaKnown RBP3.52□□□□□ -1.85
SHCBP1-202ENST00000563219 PRPF4O43172 522 aaKnown RBP eCLIP3.52□□□□□ -1.85
SHCBP1-202ENST00000563219 MSI1O43347 362 aaKnown RBP3.52□□□□□ -1.85
SHCBP1-202ENST00000563219 TIMM44O43615 452 aa3.52□□□□□ -1.85
SHCBP1-202ENST00000563219 TLX3O43711 291 aaPredicted RBP3.52□□□□□ -1.85
SHCBP1-202ENST00000563219 CCNT1O60563 726 aaKnown RBP3.52□□□□□ -1.85
SHCBP1-202ENST00000563219 NEURL1O76050 574 aa3.52□□□□□ -1.85
SHCBP1-202ENST00000563219 HLA-DQA2P01906 255 aa3.52□□□□□ -1.85
SHCBP1-202ENST00000563219 LCKP06239 509 aa3.52□□□□□ -1.85
SHCBP1-202ENST00000563219 HSP90AA1P07900 732 aaKnown RBP3.52□□□□□ -1.85
SHCBP1-202ENST00000563219 PRKCHP24723 683 aa3.52□□□□□ -1.85
SHCBP1-202ENST00000563219 GSTM2P28161 218 aa3.52□□□□□ -1.85
SHCBP1-202ENST00000563219 HOXD9P28356 352 aaPredicted RBP3.52□□□□□ -1.85
SHCBP1-202ENST00000563219 TYK2P29597 1187 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms