RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 RETSATQ6NUM9 610 aa13.71□□□□□ -0.21
CDH1-204ENST00000562118 DAAM2Q86T65 1068 aa13.71□□□□□ -0.21
CDH1-204ENST00000562118 KRT35Q92764 455 aa13.71□□□□□ -0.21
CDH1-204ENST00000562118 RPL10LQ96L21 214 aaKnown RBP13.71□□□□□ -0.21
CDH1-204ENST00000562118 RNF157Q96PX1 679 aa13.71□□□□□ -0.21
CDH1-204ENST00000562118 FAM129BQ96TA1 746 aa13.71□□□□□ -0.21
CDH1-204ENST00000562118 SLC39A8Q9C0K1 460 aa13.71□□□□□ -0.21
CDH1-204ENST00000562118 SLC25A13Q9UJS0 675 aa13.71□□□□□ -0.21
CDH1-204ENST00000562118 HYOU1Q9Y4L1 999 aa13.71□□□□□ -0.21
CDH1-204ENST00000562118 PCDHA3Q9Y5H8 950 aa13.71□□□□□ -0.21
CDH1-204ENST00000562118 RAD54BQ9Y620 910 aa13.71□□□□□ -0.21
CDH1-204ENST00000562118 SHROOM3Q8TF72 1996 aa13.71□□□□□ -0.22
CDH1-204ENST00000562118 TCRBV21S2A2A0A5A6 115 aa13.7□□□□□ -0.22
CDH1-204ENST00000562118 TMEM110-MUSTN1A8MSY1 372 aa13.7□□□□□ -0.22
CDH1-204ENST00000562118 SMAD6O43541 496 aaKnown RBP13.7□□□□□ -0.22
CDH1-204ENST00000562118 KRT86O43790 486 aa13.7□□□□□ -0.22
CDH1-204ENST00000562118 SPOPO43791 374 aa13.7□□□□□ -0.22
CDH1-204ENST00000562118 SIN3BO75182 1162 aa13.7□□□□□ -0.22
CDH1-204ENST00000562118 ALDH1A2O94788 518 aa13.7□□□□□ -0.22
CDH1-204ENST00000562118 EPHX1P07099 455 aa13.7□□□□□ -0.22
CDH1-204ENST00000562118 SERPINB6P35237 376 aa13.7□□□□□ -0.22
CDH1-204ENST00000562118 WASP42768 502 aa13.7□□□□□ -0.22
CDH1-204ENST00000562118 MARCKSL1P49006 195 aa13.7□□□□□ -0.22
CDH1-204ENST00000562118 ST8SIA6P61647 398 aa13.7□□□□□ -0.22
CDH1-204ENST00000562118 ZBTB16Q05516 673 aa13.7□□□□□ -0.22
CDH1-204ENST00000562118 GALNT2Q10471 571 aa13.7□□□□□ -0.22
CDH1-204ENST00000562118 KRT81Q14533 505 aa13.7□□□□□ -0.22
CDH1-204ENST00000562118 ELAVL3Q14576 367 aaKnown RBP13.7□□□□□ -0.22
CDH1-204ENST00000562118 STARD3Q14849 445 aa13.7□□□□□ -0.22
CDH1-204ENST00000562118 PPP2R5EQ16537 467 aa13.7□□□□□ -0.22
CDH1-204ENST00000562118 MAP7D1Q3KQU3 841 aa13.7□□□□□ -0.22
CDH1-204ENST00000562118 C22orf39Q6P5X5 142 aa13.7□□□□□ -0.22
CDH1-204ENST00000562118 TMCO3Q6UWJ1 677 aa13.7□□□□□ -0.22
CDH1-204ENST00000562118 LRRC49Q8IUZ0 686 aa13.7□□□□□ -0.22
CDH1-204ENST00000562118 PCDH20Q8N6Y1 951 aaKnown RBP13.7□□□□□ -0.22
CDH1-204ENST00000562118 PLD5Q8N7P1 536 aa13.7□□□□□ -0.22
CDH1-204ENST00000562118 KCTD6Q8NC69 237 aa13.7□□□□□ -0.22
CDH1-204ENST00000562118 EXD1Q8NHP7 514 aa13.7□□□□□ -0.22
CDH1-204ENST00000562118 KIAA1524Q8TCG1 905 aa13.7□□□□□ -0.22
CDH1-204ENST00000562118 HES6Q96HZ4 224 aa13.7□□□□□ -0.22
CDH1-204ENST00000562118 EPC1Q9H2F5 836 aa13.7□□□□□ -0.22
CDH1-204ENST00000562118 KLHL11Q9NVR0 708 aa13.7□□□□□ -0.22
CDH1-204ENST00000562118 EFR3BQ9Y2G0 817 aa13.7□□□□□ -0.22
CDH1-204ENST00000562118 PPP2R2CQ9Y2T4 447 aa13.7□□□□□ -0.22
CDH1-204ENST00000562118 ZNF292O60281 2723 aa13.7□□□□□ -0.22
CDH1-204ENST00000562118 ANKRD36A6QL64 1941 aa13.69□□□□□ -0.22
CDH1-204ENST00000562118 CCDC66A2RUB6 948 aa13.69□□□□□ -0.22
CDH1-204ENST00000562118 ARHGAP42A6NI28 874 aa13.69□□□□□ -0.22
CDH1-204ENST00000562118 H0Y858 1186 aa13.69□□□□□ -0.22
CDH1-204ENST00000562118 K7ERQ8 282 aa13.69□□□□□ -0.22
CDH1-204ENST00000562118 CBX4O00257 560 aa13.69□□□□□ -0.22
CDH1-204ENST00000562118 MCF2LO15068 1137 aa13.69□□□□□ -0.22
CDH1-204ENST00000562118 AXIN1O15169 862 aa13.69□□□□□ -0.22
CDH1-204ENST00000562118 NRDCO43847 1150 aa13.69□□□□□ -0.22
CDH1-204ENST00000562118 MFSD11O43934 449 aa13.69□□□□□ -0.22
CDH1-204ENST00000562118 SYNCRIPO60506 623 aaKnown RBP13.69□□□□□ -0.22
CDH1-204ENST00000562118 PALMO75781 387 aa13.69□□□□□ -0.22
CDH1-204ENST00000562118 VAV1P15498 845 aa13.69□□□□□ -0.22
CDH1-204ENST00000562118 P2RY2P41231 377 aa13.69□□□□□ -0.22
CDH1-204ENST00000562118 FNTBP49356 437 aa13.69□□□□□ -0.22
CDH1-204ENST00000562118 PAPOLAP51003 745 aaKnown RBP13.69□□□□□ -0.22
CDH1-204ENST00000562118 COPS2P61201 443 aa13.69□□□□□ -0.22
CDH1-204ENST00000562118 IL10RBQ08334 325 aa13.69□□□□□ -0.22
CDH1-204ENST00000562118 DLG2Q15700 870 aa13.69□□□□□ -0.22
CDH1-204ENST00000562118 IL31Q6EBC2 164 aa13.69□□□□□ -0.22
CDH1-204ENST00000562118 MFSD7Q6UXD7 560 aa13.69□□□□□ -0.22
CDH1-204ENST00000562118 TP53INP2Q8IXH6 220 aa13.69□□□□□ -0.22
CDH1-204ENST00000562118 SYCE1Q8N0S2 351 aa13.69□□□□□ -0.22
CDH1-204ENST00000562118 ZNF366Q8N895 744 aa13.69□□□□□ -0.22
CDH1-204ENST00000562118 OR2A12Q8NGT7 310 aa13.69□□□□□ -0.22
CDH1-204ENST00000562118 GAB3Q8WWW8 586 aa13.69□□□□□ -0.22
CDH1-204ENST00000562118 ALG3Q92685 438 aa13.69□□□□□ -0.22
CDH1-204ENST00000562118 ZNF599Q96NL3 588 aa13.69□□□□□ -0.22
CDH1-204ENST00000562118 OLFM3Q96PB7 478 aa13.69□□□□□ -0.22
CDH1-204ENST00000562118 TSGA13Q96PP4 275 aa13.69□□□□□ -0.22
CDH1-204ENST00000562118 OTOGLQ3ZCN5 2332 aa13.69□□□□□ -0.22
CDH1-204ENST00000562118 hCG_1818297A0A087WSY0 165 aa13.68□□□□□ -0.22
CDH1-204ENST00000562118 MACROD2A1Z1Q3 448 aa13.68□□□□□ -0.22
CDH1-204ENST00000562118 LRRD1A4D1F6 860 aa13.68□□□□□ -0.22
CDH1-204ENST00000562118 MIF4GDA9UHW6 222 aaKnown RBP13.68□□□□□ -0.22
CDH1-204ENST00000562118 DDX3YO15523 660 aaKnown RBP13.68□□□□□ -0.22
CDH1-204ENST00000562118 DAPK3O43293 454 aa13.68□□□□□ -0.22
CDH1-204ENST00000562118 HRO43593 1189 aa13.68□□□□□ -0.22
CDH1-204ENST00000562118 MAFKO60675 156 aa13.68□□□□□ -0.22
CDH1-204ENST00000562118 GSRP00390 522 aa13.68□□□□□ -0.22
CDH1-204ENST00000562118 KRT1P04264 644 aa13.68□□□□□ -0.22
CDH1-204ENST00000562118 NNMTP40261 264 aa13.68□□□□□ -0.22
CDH1-204ENST00000562118 SSR1P43307 286 aaKnown RBP13.68□□□□□ -0.22
CDH1-204ENST00000562118 RPS14P62263 151 aaKnown RBP13.68□□□□□ -0.22
CDH1-204ENST00000562118 NHLH1Q02575 133 aa13.68□□□□□ -0.22
CDH1-204ENST00000562118 ZNF33AQ06730 810 aa13.68□□□□□ -0.22
CDH1-204ENST00000562118 CCDC173Q0VFZ6 552 aa13.68□□□□□ -0.22
CDH1-204ENST00000562118 SLC10A2Q12908 348 aaPredicted RBP13.68□□□□□ -0.22
CDH1-204ENST00000562118 RFTN1Q14699 578 aaPredicted RBP13.68□□□□□ -0.22
CDH1-204ENST00000562118 ANO7Q6IWH7 933 aa13.68□□□□□ -0.22
CDH1-204ENST00000562118 ZC3H14Q6PJT7 736 aaKnown RBP13.68□□□□□ -0.22
CDH1-204ENST00000562118 LINGO4Q6UY18 593 aa13.68□□□□□ -0.22
CDH1-204ENST00000562118 SPOCD1Q6ZMY3 1216 aa13.68□□□□□ -0.22
CDH1-204ENST00000562118 ARHGAP36Q6ZRI8 547 aa13.68□□□□□ -0.22
CDH1-204ENST00000562118 TMPRSS6Q8IU80 811 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms