RNA–Protein interactions for RNA: ENST00000561348.1

HERC1-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-212ENST00000561348 CEP192Q8TEP8 1941 aa10.35□□□□□ -0.75
HERC1-212ENST00000561348 DOCK4Q8N1I0 1966 aa10.34□□□□□ -0.75
HERC1-212ENST00000561348 WDR87Q6ZQQ6 2873 aa10.34□□□□□ -0.75
HERC1-212ENST00000561348 BCLAF3A2AJT9 711 aaKnown RBP10.34□□□□□ -0.75
HERC1-212ENST00000561348 RASA4BC9J798 803 aa10.34□□□□□ -0.75
HERC1-212ENST00000561348 H3BRJ5 948 aa10.34□□□□□ -0.75
HERC1-212ENST00000561348 KHNYNO15037 678 aaKnown RBP10.34□□□□□ -0.75
HERC1-212ENST00000561348 RASA4O43374 803 aa10.34□□□□□ -0.75
HERC1-212ENST00000561348 GDF9O60383 454 aa10.34□□□□□ -0.75
HERC1-212ENST00000561348 SEMA4FO95754 770 aa10.34□□□□□ -0.75
HERC1-212ENST00000561348 IL1R2P27930 398 aa10.34□□□□□ -0.75
HERC1-212ENST00000561348 ETFBP38117 255 aa10.34□□□□□ -0.75
HERC1-212ENST00000561348 MAGEA1P43355 309 aa10.34□□□□□ -0.75
HERC1-212ENST00000561348 MAPK8P45983 427 aa10.34□□□□□ -0.75
HERC1-212ENST00000561348 CLCN6P51797 869 aa10.34□□□□□ -0.75
HERC1-212ENST00000561348 AIF1P55008 147 aa10.34□□□□□ -0.75
HERC1-212ENST00000561348 NAP1L1P55209 391 aaKnown RBP10.34□□□□□ -0.75
HERC1-212ENST00000561348 SCAPQ12770 1279 aa10.34□□□□□ -0.75
HERC1-212ENST00000561348 TBX2Q13207 712 aaPredicted RBP10.34□□□□□ -0.75
HERC1-212ENST00000561348 HADHQ16836 314 aaKnown RBP10.34□□□□□ -0.75
HERC1-212ENST00000561348 ODF2Q5BJF6 829 aa10.34□□□□□ -0.75
HERC1-212ENST00000561348 MANEALQ5VSG8 457 aa10.34□□□□□ -0.75
HERC1-212ENST00000561348 DCAF12L1Q5VU92 463 aa10.34□□□□□ -0.75
HERC1-212ENST00000561348 TXNRD3NBQ6F5E7 133 aa10.34□□□□□ -0.75
HERC1-212ENST00000561348 PRR23CQ6ZRP0 262 aa10.34□□□□□ -0.75
HERC1-212ENST00000561348 RFX8Q6ZV50 586 aa10.34□□□□□ -0.75
HERC1-212ENST00000561348 CPNE8Q86YQ8 564 aa10.34□□□□□ -0.75
HERC1-212ENST00000561348 RTL3Q8N8U3 475 aaKnown RBP10.34□□□□□ -0.75
HERC1-212ENST00000561348 TC2NQ8N9U0 490 aa10.34□□□□□ -0.75
HERC1-212ENST00000561348 OR14C36Q8NHC7 312 aa10.34□□□□□ -0.75
HERC1-212ENST00000561348 SLC35G2Q8TBE7 412 aa10.34□□□□□ -0.75
HERC1-212ENST00000561348 ARHGEF2Q92974 986 aaKnown RBP10.34□□□□□ -0.75
HERC1-212ENST00000561348 HMCESQ96FZ2 354 aa10.34□□□□□ -0.75
HERC1-212ENST00000561348 MRFAP1L1Q96HT8 127 aa10.34□□□□□ -0.75
HERC1-212ENST00000561348 FAM129BQ96TA1 746 aa10.34□□□□□ -0.75
HERC1-212ENST00000561348 NCAPGQ9BPX3 1015 aa10.34□□□□□ -0.75
HERC1-212ENST00000561348 GTPBP2Q9BX10 602 aaKnown RBP10.34□□□□□ -0.75
HERC1-212ENST00000561348 CALN1Q9BXU9 219 aa10.34□□□□□ -0.75
HERC1-212ENST00000561348 RSPH9Q9H1X1 276 aaPredicted RBP10.34□□□□□ -0.75
HERC1-212ENST00000561348 MAGEH1Q9H213 219 aa10.34□□□□□ -0.75
HERC1-212ENST00000561348 NEUROG2Q9H2A3 272 aa10.34□□□□□ -0.75
HERC1-212ENST00000561348 PABPC3Q9H361 631 aaKnown RBP10.34□□□□□ -0.75
HERC1-212ENST00000561348 ZDHHC6Q9H6R6 413 aa10.34□□□□□ -0.75
HERC1-212ENST00000561348 FBRSQ9HAH7 460 aa10.34□□□□□ -0.75
HERC1-212ENST00000561348 OSGEPQ9NPF4 335 aa10.34□□□□□ -0.75
HERC1-212ENST00000561348 FSCN3Q9NQT6 498 aa10.34□□□□□ -0.75
HERC1-212ENST00000561348 DYRK4Q9NR20 520 aa10.34□□□□□ -0.75
HERC1-212ENST00000561348 WSB2Q9NYS7 404 aaPredicted RBP10.34□□□□□ -0.75
HERC1-212ENST00000561348 SERGEFQ9UGK8 458 aa10.34□□□□□ -0.75
HERC1-212ENST00000561348 CKAP5Q14008 2032 aa10.34□□□□□ -0.75
HERC1-212ENST00000561348 TBC1D3DA0A087WVF3 549 aa10.33□□□□□ -0.76
HERC1-212ENST00000561348 TBC1D3IA0A087WXS9 549 aa10.33□□□□□ -0.76
HERC1-212ENST00000561348 TBC1D3EA0A087X179 549 aa10.33□□□□□ -0.76
HERC1-212ENST00000561348 TBC1D3KA0A087X1G2 549 aa10.33□□□□□ -0.76
HERC1-212ENST00000561348 TBC1D3FA6NER0 549 aaPredicted RBP10.33□□□□□ -0.76
HERC1-212ENST00000561348 GOLGA6L6A8MZA4 724 aa10.33□□□□□ -0.76
HERC1-212ENST00000561348 TBC1D3LB9A6J9 549 aa10.33□□□□□ -0.76
HERC1-212ENST00000561348 C1QTNF3-AMACRE9PGA6 284 aa10.33□□□□□ -0.76
HERC1-212ENST00000561348 KRIT1O00522 736 aa10.33□□□□□ -0.76
HERC1-212ENST00000561348 FGF10O15520 208 aaPredicted RBP10.33□□□□□ -0.76
HERC1-212ENST00000561348 ATP9BO43861 1147 aa10.33□□□□□ -0.76
HERC1-212ENST00000561348 IPO7O95373 1038 aaKnown RBP10.33□□□□□ -0.76
HERC1-212ENST00000561348 ADH1BP00325 375 aa10.33□□□□□ -0.76
HERC1-212ENST00000561348 TMEM253P0C7T8 217 aa10.33□□□□□ -0.76
HERC1-212ENST00000561348 TBC1D3HP0C7X1 549 aa10.33□□□□□ -0.76
HERC1-212ENST00000561348 RARAP10276 462 aa10.33□□□□□ -0.76
HERC1-212ENST00000561348 ERCC2P18074 760 aa10.33□□□□□ -0.76
HERC1-212ENST00000561348 AMPD1P23109 780 aa10.33□□□□□ -0.76
HERC1-212ENST00000561348 GKP32189 559 aa10.33□□□□□ -0.76
HERC1-212ENST00000561348 CHRNA3P32297 505 aa10.33□□□□□ -0.76
HERC1-212ENST00000561348 CYLC1P35663 651 aaPredicted RBP10.33□□□□□ -0.76
HERC1-212ENST00000561348 METAP1P53582 386 aa10.33□□□□□ -0.76
HERC1-212ENST00000561348 ATXN3P54252 364 aaPredicted RBP10.33□□□□□ -0.76
HERC1-212ENST00000561348 CDH6P55285 790 aa10.33□□□□□ -0.76
HERC1-212ENST00000561348 ARF5P84085 180 aa10.33□□□□□ -0.76
HERC1-212ENST00000561348 NRG1Q02297 640 aaPredicted RBP10.33□□□□□ -0.76
HERC1-212ENST00000561348 SFSWAPQ12872 951 aaKnown RBP10.33□□□□□ -0.76
HERC1-212ENST00000561348 ELAVL3Q14576 367 aaKnown RBP10.33□□□□□ -0.76
HERC1-212ENST00000561348 CSRP2Q16527 193 aa10.33□□□□□ -0.76
HERC1-212ENST00000561348 UAP1L1Q3KQV9 507 aa10.33□□□□□ -0.76
HERC1-212ENST00000561348 ATP13A4Q4VNC1 1196 aa10.33□□□□□ -0.76
HERC1-212ENST00000561348 BOLA3Q53S33 107 aa10.33□□□□□ -0.76
HERC1-212ENST00000561348 TRIM61Q5EBN2 209 aa10.33□□□□□ -0.76
HERC1-212ENST00000561348 ARSIQ5FYB1 569 aa10.33□□□□□ -0.76
HERC1-212ENST00000561348 WDR45BQ5MNZ6 344 aa10.33□□□□□ -0.76
HERC1-212ENST00000561348 ATXN7L2Q5T6C5 722 aaPredicted RBP10.33□□□□□ -0.76
HERC1-212ENST00000561348 FAM46CQ5VWP2 391 aa10.33□□□□□ -0.76
HERC1-212ENST00000561348 TBC1D3GQ6DHY5 549 aa10.33□□□□□ -0.76
HERC1-212ENST00000561348 TBC1D3CQ6IPX1 549 aa10.33□□□□□ -0.76
HERC1-212ENST00000561348 C22orf39Q6P5X5 142 aa10.33□□□□□ -0.76
HERC1-212ENST00000561348 ZNF783Q6ZMS7 281 aa10.33□□□□□ -0.76
HERC1-212ENST00000561348 NLRP14Q86W24 1093 aa10.33□□□□□ -0.76
HERC1-212ENST00000561348 SLC41A1Q8IVJ1 513 aa10.33□□□□□ -0.76
HERC1-212ENST00000561348 TBC1D3Q8IZP1 549 aaPredicted RBP10.33□□□□□ -0.76
HERC1-212ENST00000561348 ZCCHC9Q8N567 271 aaKnown RBP10.33□□□□□ -0.76
HERC1-212ENST00000561348 GPR161Q8N6U8 529 aaKnown RBP10.33□□□□□ -0.76
HERC1-212ENST00000561348 KDM1BQ8NB78 822 aa10.33□□□□□ -0.76
HERC1-212ENST00000561348 KCTD6Q8NC69 237 aa10.33□□□□□ -0.76
HERC1-212ENST00000561348 CHST14Q8NCH0 376 aa10.33□□□□□ -0.76
HERC1-212ENST00000561348 PIP4K2CQ8TBX8 421 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms