RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 SUCLA2Q9P2R7 463 aaPredicted RBP4.11□□□□□ -1.75
HERC1-211ENST00000560983 RCAN3Q9UKA8 241 aa4.11□□□□□ -1.75
HERC1-211ENST00000560983 BTBD3Q9Y2F9 522 aa4.11□□□□□ -1.75
HERC1-211ENST00000560983 PCDHA10Q9Y5I2 948 aa4.11□□□□□ -1.75
HERC1-211ENST00000560983 INSL5Q9Y5Q6 135 aa4.11□□□□□ -1.75
HERC1-211ENST00000560983 LRBAP50851 2863 aa4.11□□□□□ -1.75
HERC1-211ENST00000560983 LRRK2Q5S007 2527 aa4.11□□□□□ -1.75
HERC1-211ENST00000560983 OTOGQ6ZRI0 2925 aa4.1□□□□□ -1.75
HERC1-211ENST00000560983 DOCK5Q9H7D0 1870 aa4.1□□□□□ -1.75
HERC1-211ENST00000560983 IGLV3-22A0A075B6J6 115 aa4.1□□□□□ -1.75
HERC1-211ENST00000560983 ESYT2A0FGR8 921 aa4.1□□□□□ -1.75
HERC1-211ENST00000560983 TMEM150BA6NC51 233 aa4.1□□□□□ -1.75
HERC1-211ENST00000560983 CASTOR2A6NHX0 329 aa4.1□□□□□ -1.75
HERC1-211ENST00000560983 GOLGA8BA8MQT2 603 aa4.1□□□□□ -1.75
HERC1-211ENST00000560983 FAM86B1E9PN63 330 aa4.1□□□□□ -1.75
HERC1-211ENST00000560983 TRIM24O15164 1050 aa4.1□□□□□ -1.75
HERC1-211ENST00000560983 DAPK3O43293 454 aa4.1□□□□□ -1.75
HERC1-211ENST00000560983 TNFSF14O43557 240 aa4.1□□□□□ -1.75
HERC1-211ENST00000560983 BRINP1O60477 761 aa4.1□□□□□ -1.75
HERC1-211ENST00000560983 FAM20BO75063 409 aa4.1□□□□□ -1.75
HERC1-211ENST00000560983 SEC24DO94855 1032 aaPredicted RBP4.1□□□□□ -1.75
HERC1-211ENST00000560983 FSBPO95073 299 aa4.1□□□□□ -1.75
HERC1-211ENST00000560983 VNN2O95498 520 aa4.1□□□□□ -1.75
HERC1-211ENST00000560983 FAM86B2P0C5J1 330 aa4.1□□□□□ -1.75
HERC1-211ENST00000560983 JMJD7P0C870 316 aa4.1□□□□□ -1.75
HERC1-211ENST00000560983 ZNF883P0CG24 379 aa4.1□□□□□ -1.75
HERC1-211ENST00000560983 JUPP14923 745 aa4.1□□□□□ -1.75
HERC1-211ENST00000560983 ARSAP15289 507 aa4.1□□□□□ -1.75
HERC1-211ENST00000560983 TKTP29401 623 aaKnown RBP4.1□□□□□ -1.75
HERC1-211ENST00000560983 ELF1P32519 619 aa4.1□□□□□ -1.75
HERC1-211ENST00000560983 NT5C2P49902 561 aa4.1□□□□□ -1.75
HERC1-211ENST00000560983 TMPRSS3P57727 454 aa4.1□□□□□ -1.75
HERC1-211ENST00000560983 TWF1Q12792 350 aa4.1□□□□□ -1.75
HERC1-211ENST00000560983 ELAVL2Q12926 359 aaKnown RBP4.1□□□□□ -1.75
HERC1-211ENST00000560983 GRIK3Q13003 919 aa4.1□□□□□ -1.75
HERC1-211ENST00000560983 MAN2A1Q16706 1144 aa4.1□□□□□ -1.75
HERC1-211ENST00000560983 UGCGQ16739 394 aa4.1□□□□□ -1.75
HERC1-211ENST00000560983 PLEKHG6Q3KR16 790 aa4.1□□□□□ -1.75
HERC1-211ENST00000560983 TBC1D25Q3MII6 688 aa4.1□□□□□ -1.75
HERC1-211ENST00000560983 LINC00303Q3SY05 128 aa4.1□□□□□ -1.75
HERC1-211ENST00000560983 IFIT1BQ5T764 474 aaKnown RBP4.1□□□□□ -1.75
HERC1-211ENST00000560983 KIAA1614Q5VZ46 1190 aa4.1□□□□□ -1.75
HERC1-211ENST00000560983 RABEPKQ7Z6M1 372 aa4.1□□□□□ -1.75
HERC1-211ENST00000560983 ZNF589Q86UQ0 364 aaPredicted RBP4.1□□□□□ -1.75
HERC1-211ENST00000560983 PRIMA1Q86XR5 153 aa4.1□□□□□ -1.75
HERC1-211ENST00000560983 CCDC33Q8N5R6 958 aa4.1□□□□□ -1.75
HERC1-211ENST00000560983 ZNF419Q96HQ0 510 aaPredicted RBP4.1□□□□□ -1.75
HERC1-211ENST00000560983 NAF1Q96HR8 494 aaKnown RBP4.1□□□□□ -1.75
HERC1-211ENST00000560983 GPATCH3Q96I76 525 aa4.1□□□□□ -1.75
HERC1-211ENST00000560983 FAM167AQ96KS9 214 aa4.1□□□□□ -1.75
HERC1-211ENST00000560983 FAM227BQ96M60 508 aa4.1□□□□□ -1.75
HERC1-211ENST00000560983 NLRP4Q96MN2 994 aa4.1□□□□□ -1.75
HERC1-211ENST00000560983 SH2D3AQ9BRG2 576 aa4.1□□□□□ -1.75
HERC1-211ENST00000560983 MLST8Q9BVC4 326 aa4.1□□□□□ -1.75
HERC1-211ENST00000560983 NXF3Q9H4D5 531 aaKnown RBP4.1□□□□□ -1.75
HERC1-211ENST00000560983 ASAH2Q9NR71 780 aa4.1□□□□□ -1.75
HERC1-211ENST00000560983 HELLSQ9NRZ9 838 aa4.1□□□□□ -1.75
HERC1-211ENST00000560983 TM7SF3Q9NS93 570 aa4.1□□□□□ -1.75
HERC1-211ENST00000560983 TPCN1Q9ULQ1 816 aa4.1□□□□□ -1.75
HERC1-211ENST00000560983 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.1□□□□□ -1.75
HERC1-211ENST00000560983 PCDHGB2Q9Y5G2 931 aa4.1□□□□□ -1.75
HERC1-211ENST00000560983 HEMK1Q9Y5R4 338 aaPredicted RBP4.1□□□□□ -1.75
HERC1-211ENST00000560983 WDR81Q562E7 1941 aa4.1□□□□□ -1.75
HERC1-211ENST00000560983 POLQO75417 2590 aa4.1□□□□□ -1.75
HERC1-211ENST00000560983 SETD2Q9BYW2 2564 aaPredicted RBP4.1□□□□□ -1.75
HERC1-211ENST00000560983 KAT6AQ92794 2004 aa4.1□□□□□ -1.75
HERC1-211ENST00000560983 SPAG17Q6Q759 2223 aa4.1□□□□□ -1.75
HERC1-211ENST00000560983 PCDH15Q96QU1 1955 aa4.09□□□□□ -1.75
HERC1-211ENST00000560983 AHCTF1Q8WYP5 2266 aa4.09□□□□□ -1.75
HERC1-211ENST00000560983 I3L4J1 428 aa4.09□□□□□ -1.75
HERC1-211ENST00000560983 IPO5O00410 1097 aaKnown RBP4.09□□□□□ -1.75
HERC1-211ENST00000560983 PTGESO14684 152 aa4.09□□□□□ -1.75
HERC1-211ENST00000560983 PPP1R12AO14974 1030 aaPredicted RBP4.09□□□□□ -1.75
HERC1-211ENST00000560983 AP5Z1O43299 807 aa4.09□□□□□ -1.75
HERC1-211ENST00000560983 TSPAN1O60635 241 aa4.09□□□□□ -1.75
HERC1-211ENST00000560983 ACTN2P35609 894 aa4.09□□□□□ -1.75
HERC1-211ENST00000560983 MCM2P49736 904 aa4.09□□□□□ -1.75
HERC1-211ENST00000560983 UCNP55089 124 aa4.09□□□□□ -1.75
HERC1-211ENST00000560983 NPEPPSP55786 919 aa4.09□□□□□ -1.75
HERC1-211ENST00000560983 PRKCEQ02156 737 aa4.09□□□□□ -1.75
HERC1-211ENST00000560983 TLE1Q04724 770 aa4.09□□□□□ -1.75
HERC1-211ENST00000560983 BYSLQ13895 437 aaKnown RBP4.09□□□□□ -1.75
HERC1-211ENST00000560983 IGFBP7Q16270 282 aa4.09□□□□□ -1.75
HERC1-211ENST00000560983 HLA-BQ31612 363 aa4.09□□□□□ -1.75
HERC1-211ENST00000560983 MCMDC2Q4G0Z9 681 aa4.09□□□□□ -1.75
HERC1-211ENST00000560983 GPR158Q5T848 1215 aa4.09□□□□□ -1.75
HERC1-211ENST00000560983 MBNL2Q5VZF2 373 aaKnown RBP4.09□□□□□ -1.75
HERC1-211ENST00000560983 TIGD7Q6NT04 549 aaPredicted RBP4.09□□□□□ -1.75
HERC1-211ENST00000560983 USP49Q70CQ1 688 aa4.09□□□□□ -1.75
HERC1-211ENST00000560983 NIPA1Q7RTP0 329 aa4.09□□□□□ -1.75
HERC1-211ENST00000560983 SRGAP1Q7Z6B7 1085 aa4.09□□□□□ -1.75
HERC1-211ENST00000560983 TTC30AQ86WT1 665 aa4.09□□□□□ -1.75
HERC1-211ENST00000560983 TICAM1Q8IUC6 712 aa4.09□□□□□ -1.75
HERC1-211ENST00000560983 SMAP1Q8IYB5 467 aaPredicted RBP4.09□□□□□ -1.75
HERC1-211ENST00000560983 TRIML1Q8N9V2 468 aa4.09□□□□□ -1.75
HERC1-211ENST00000560983 ZNF248Q8NDW4 579 aa4.09□□□□□ -1.75
HERC1-211ENST00000560983 OR52N2Q8NGI0 321 aa4.09□□□□□ -1.75
HERC1-211ENST00000560983 PRPF31Q8WWY3 499 aaKnown RBP4.09□□□□□ -1.75
HERC1-211ENST00000560983 CRYGNQ8WXF5 182 aa4.09□□□□□ -1.75
HERC1-211ENST00000560983 CD101Q93033 1021 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 103.8 ms