RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 ZNF599Q96NL3 588 aa13.14□□□□□ -0.31
SNX1-211ENST00000560829 DDX50Q9BQ39 737 aaKnown RBP13.14□□□□□ -0.31
SNX1-211ENST00000560829 LRRC3Q9BY71 257 aa13.14□□□□□ -0.31
SNX1-211ENST00000560829 MAGEH1Q9H213 219 aa13.14□□□□□ -0.31
SNX1-211ENST00000560829 KIF9Q9HAQ2 790 aa13.14□□□□□ -0.31
SNX1-211ENST00000560829 SP110Q9HB58 689 aa13.14□□□□□ -0.31
SNX1-211ENST00000560829 GKN1Q9NS71 199 aa13.14□□□□□ -0.31
SNX1-211ENST00000560829 PIH1D1Q9NWS0 290 aaKnown RBP13.14□□□□□ -0.31
SNX1-211ENST00000560829 NKIRAS1Q9NYS0 192 aa13.14□□□□□ -0.31
SNX1-211ENST00000560829 SAMD15Q9P1V8 674 aa13.14□□□□□ -0.31
SNX1-211ENST00000560829 AGO1Q9UL18 857 aaKnown RBP13.14□□□□□ -0.31
SNX1-211ENST00000560829 KIAA0100Q14667 2235 aaKnown RBP13.14□□□□□ -0.31
SNX1-211ENST00000560829 FAM237BA0A1B0GVD1 139 aa13.14□□□□□ -0.31
SNX1-211ENST00000560829 PRAMEF11O60813 436 aa13.14□□□□□ -0.31
SNX1-211ENST00000560829 KRT37O76014 449 aa13.14□□□□□ -0.31
SNX1-211ENST00000560829 USP1O94782 785 aa13.14□□□□□ -0.31
SNX1-211ENST00000560829 PPARDQ03181 441 aa13.14□□□□□ -0.31
SNX1-211ENST00000560829 MPP3Q13368 585 aa13.14□□□□□ -0.31
SNX1-211ENST00000560829 LGSNQ5TDP6 509 aa13.14□□□□□ -0.31
SNX1-211ENST00000560829 TTC39BQ5VTQ0 682 aaPredicted RBP13.14□□□□□ -0.31
SNX1-211ENST00000560829 RFWD3Q6PCD5 774 aa13.14□□□□□ -0.31
SNX1-211ENST00000560829 SH2D5Q6ZV89 423 aa13.14□□□□□ -0.31
SNX1-211ENST00000560829 TMC8Q8IU68 726 aa13.14□□□□□ -0.31
SNX1-211ENST00000560829 NSMCE1Q8WV22 266 aa13.14□□□□□ -0.31
SNX1-211ENST00000560829 IMP4Q96G21 291 aaKnown RBP13.14□□□□□ -0.31
SNX1-211ENST00000560829 ZNF317Q96PQ6 595 aaPredicted RBP13.14□□□□□ -0.31
SNX1-211ENST00000560829 CCT8L2Q96SF2 557 aa13.14□□□□□ -0.31
SNX1-211ENST00000560829 TBL1YQ9BQ87 522 aa13.14□□□□□ -0.31
SNX1-211ENST00000560829 EMILIN2Q9BXX0 1053 aa13.14□□□□□ -0.31
SNX1-211ENST00000560829 ENTPD7Q9NQZ7 604 aa13.14□□□□□ -0.31
SNX1-211ENST00000560829 VPS45Q9NRW7 570 aa13.14□□□□□ -0.31
SNX1-211ENST00000560829 UBP1Q9NZI7 540 aa13.14□□□□□ -0.31
SNX1-211ENST00000560829 ZFP37Q9Y6Q3 630 aaPredicted RBP13.14□□□□□ -0.31
SNX1-211ENST00000560829 ERICH4A6NGS2 130 aa13.13□□□□□ -0.31
SNX1-211ENST00000560829 NDUFAB1O14561 156 aa13.13□□□□□ -0.31
SNX1-211ENST00000560829 TLL1O43897 1013 aa13.13□□□□□ -0.31
SNX1-211ENST00000560829 GREM1O60565 184 aa13.13□□□□□ -0.31
SNX1-211ENST00000560829 MT-CYBP00156 380 aaPredicted RBP13.13□□□□□ -0.31
SNX1-211ENST00000560829 C1RP00736 705 aa13.13□□□□□ -0.31
SNX1-211ENST00000560829 SNRPAP09012 282 aaKnown RBP13.13□□□□□ -0.31
SNX1-211ENST00000560829 MBL2P11226 248 aaPredicted RBP13.13□□□□□ -0.31
SNX1-211ENST00000560829 KRT4P19013 534 aa13.13□□□□□ -0.31
SNX1-211ENST00000560829 SERPINB9P50453 376 aa13.13□□□□□ -0.31
SNX1-211ENST00000560829 SLC10A7Q0GE19 358 aa13.13□□□□□ -0.31
SNX1-211ENST00000560829 DENND5AQ6IQ26 1287 aa13.13□□□□□ -0.31
SNX1-211ENST00000560829 RANBP10Q6VN20 620 aa13.13□□□□□ -0.31
SNX1-211ENST00000560829 C4orf33Q8N1A6 199 aa13.13□□□□□ -0.31
SNX1-211ENST00000560829 CFAP52Q8N1V2 620 aa13.13□□□□□ -0.31
SNX1-211ENST00000560829 MRPL43Q8N983 215 aaKnown RBP13.13□□□□□ -0.31
SNX1-211ENST00000560829 ANKRD42Q8N9B4 389 aa13.13□□□□□ -0.31
SNX1-211ENST00000560829 KREMEN2Q8NCW0 462 aa13.13□□□□□ -0.31
SNX1-211ENST00000560829 CKAP2Q8WWK9 683 aa13.13□□□□□ -0.31
SNX1-211ENST00000560829 CDKL2Q92772 493 aa13.13□□□□□ -0.31
SNX1-211ENST00000560829 TADA1Q96BN2 335 aa13.13□□□□□ -0.31
SNX1-211ENST00000560829 MTBPQ96DY7 904 aa13.13□□□□□ -0.31
SNX1-211ENST00000560829 CHMP6Q96FZ7 201 aa13.13□□□□□ -0.31
SNX1-211ENST00000560829 MRGPRX2Q96LB1 330 aa13.13□□□□□ -0.31
SNX1-211ENST00000560829 TCF25Q9BQ70 676 aa13.13□□□□□ -0.31
SNX1-211ENST00000560829 PDFQ9HBH1 243 aa13.13□□□□□ -0.31
SNX1-211ENST00000560829 SOX13Q9UN79 622 aa13.13□□□□□ -0.31
SNX1-211ENST00000560829 RWDD3Q9Y3V2 267 aa13.13□□□□□ -0.31
SNX1-211ENST00000560829 RPS6KL1Q9Y6S9 549 aa13.13□□□□□ -0.31
SNX1-211ENST00000560829 FAM169AQ9Y6X4 670 aa13.13□□□□□ -0.31
SNX1-211ENST00000560829 KIAA1671Q9BY89 1806 aa13.13□□□□□ -0.31
SNX1-211ENST00000560829 ZCWPW2A0A1B0GU75 182 aa13.12□□□□□ -0.31
SNX1-211ENST00000560829 A0A1B0GVM2 712 aa13.12□□□□□ -0.31
SNX1-211ENST00000560829 LCHNA4D1U4 455 aa13.12□□□□□ -0.31
SNX1-211ENST00000560829 TCAF2A6NFQ2 919 aa13.12□□□□□ -0.31
SNX1-211ENST00000560829 GFRA2O00451 464 aa13.12□□□□□ -0.31
SNX1-211ENST00000560829 KRT38O76015 456 aa13.12□□□□□ -0.31
SNX1-211ENST00000560829 NEBLO76041 1014 aa13.12□□□□□ -0.31
SNX1-211ENST00000560829 ASMTLO95671 621 aa13.12□□□□□ -0.31
SNX1-211ENST00000560829 LRG1P02750 347 aa13.12□□□□□ -0.31
SNX1-211ENST00000560829 MT-ND3P03897 115 aa13.12□□□□□ -0.31
SNX1-211ENST00000560829 C8AP07357 584 aa13.12□□□□□ -0.31
SNX1-211ENST00000560829 SPATA31D3P0C874 917 aa13.12□□□□□ -0.31
SNX1-211ENST00000560829 PFKLP17858 780 aa13.12□□□□□ -0.31
SNX1-211ENST00000560829 CNTFP26441 200 aa13.12□□□□□ -0.31
SNX1-211ENST00000560829 ACVRL1P37023 503 aa13.12□□□□□ -0.31
SNX1-211ENST00000560829 ERVFC1P60507 584 aa13.12□□□□□ -0.31
SNX1-211ENST00000560829 GNA12Q03113 381 aa13.12□□□□□ -0.31
SNX1-211ENST00000560829 UBE3AQ05086 875 aa13.12□□□□□ -0.31
SNX1-211ENST00000560829 SLC18A2Q05940 514 aa13.12□□□□□ -0.31
SNX1-211ENST00000560829 MGAT5Q09328 741 aa13.12□□□□□ -0.31
SNX1-211ENST00000560829 CERCAMQ5T4B2 595 aa13.12□□□□□ -0.31
SNX1-211ENST00000560829 TMCO4Q5TGY1 634 aa13.12□□□□□ -0.31
SNX1-211ENST00000560829 KDELC1Q6UW63 502 aa13.12□□□□□ -0.31
SNX1-211ENST00000560829 SPATA31D4Q6ZUB0 917 aa13.12□□□□□ -0.31
SNX1-211ENST00000560829 RTL10Q7L3V2 364 aa13.12□□□□□ -0.31
SNX1-211ENST00000560829 SETD3Q86TU7 594 aaPredicted RBP13.12□□□□□ -0.31
SNX1-211ENST00000560829 C7orf61Q8IZ16 206 aa13.12□□□□□ -0.31
SNX1-211ENST00000560829 BANPQ8N9N5 519 aa13.12□□□□□ -0.31
SNX1-211ENST00000560829 ADAMTS19Q8TE59 1207 aa13.12□□□□□ -0.31
SNX1-211ENST00000560829 WBP2Q969T9 261 aa13.12□□□□□ -0.31
SNX1-211ENST00000560829 PABPC5Q96DU9 382 aaKnown RBP13.12□□□□□ -0.31
SNX1-211ENST00000560829 FCRL3Q96P31 734 aaPredicted RBP13.12□□□□□ -0.31
SNX1-211ENST00000560829 SLC22A12Q96S37 553 aa13.12□□□□□ -0.31
SNX1-211ENST00000560829 KIFC1Q9BW19 673 aa13.12□□□□□ -0.31
SNX1-211ENST00000560829 ARNT2Q9HBZ2 717 aa13.12□□□□□ -0.31
SNX1-211ENST00000560829 TBC1D30Q9Y2I9 924 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms