RNA–Protein interactions for RNA: ENST00000560502.5

LDLR-213, Transcript of low density lipoprotein receptor, humanhuman

TSL 2

Gene LDLR, Length 509 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-213ENST00000560502 OSBPL9Q96SU4 736 aa14.43□□□□□ -0.1
LDLR-213ENST00000560502 ZSWIM1Q9BR11 485 aa14.43□□□□□ -0.1
LDLR-213ENST00000560502 TM9SF3Q9HD45 589 aa14.43□□□□□ -0.1
LDLR-213ENST00000560502 CNGB3Q9NQW8 809 aa14.43□□□□□ -0.1
LDLR-213ENST00000560502 ABCC13Q9NSE7 274 aa14.43□□□□□ -0.1
LDLR-213ENST00000560502 HESX1Q9UBX0 185 aa14.43□□□□□ -0.1
LDLR-213ENST00000560502 PLA2G4CQ9UP65 541 aa14.43□□□□□ -0.1
LDLR-213ENST00000560502 LAMA5O15230 3695 aa14.43□□□□□ -0.1
LDLR-213ENST00000560502 KNTC1P50748 2209 aa14.42□□□□□ -0.1
LDLR-213ENST00000560502 UQCRHLA0A096LP55 91 aa14.42□□□□□ -0.1
LDLR-213ENST00000560502 C10orf142B7Z368 130 aa14.42□□□□□ -0.1
LDLR-213ENST00000560502 ENC1O14682 589 aa14.42□□□□□ -0.1
LDLR-213ENST00000560502 PAPSS1O43252 624 aaPredicted RBP14.42□□□□□ -0.1
LDLR-213ENST00000560502 PCDHGA12O60330 932 aa14.42□□□□□ -0.1
LDLR-213ENST00000560502 UQCRHP07919 91 aa14.42□□□□□ -0.1
LDLR-213ENST00000560502 CD27P26842 260 aa14.42□□□□□ -0.1
LDLR-213ENST00000560502 CD70P32970 193 aa14.42□□□□□ -0.1
LDLR-213ENST00000560502 MAN1A1P33908 653 aa14.42□□□□□ -0.1
LDLR-213ENST00000560502 TEAD4Q15561 434 aa14.42□□□□□ -0.1
LDLR-213ENST00000560502 FAM133BQ5BKY9 247 aaKnown RBP14.42□□□□□ -0.1
LDLR-213ENST00000560502 C19orf48Q6RUI8 117 aa14.42□□□□□ -0.1
LDLR-213ENST00000560502 PDZD3Q86UT5 571 aa14.42□□□□□ -0.1
LDLR-213ENST00000560502 ERICH1Q86X53 443 aa14.42□□□□□ -0.1
LDLR-213ENST00000560502 PASD1Q8IV76 773 aa14.42□□□□□ -0.1
LDLR-213ENST00000560502 C3orf20Q8ND61 904 aa14.42□□□□□ -0.1
LDLR-213ENST00000560502 C1orf131Q8NDD1 294 aaKnown RBP14.42□□□□□ -0.1
LDLR-213ENST00000560502 UBA3Q8TBC4 463 aa14.42□□□□□ -0.1
LDLR-213ENST00000560502 RHBDD1Q8TEB9 315 aa14.42□□□□□ -0.1
LDLR-213ENST00000560502 IGSF8Q969P0 613 aa14.42□□□□□ -0.1
LDLR-213ENST00000560502 HES6Q96HZ4 224 aa14.42□□□□□ -0.1
LDLR-213ENST00000560502 C11orf70Q9BRQ4 267 aa14.42□□□□□ -0.1
LDLR-213ENST00000560502 SELENOOQ9BVL4 669 aa14.42□□□□□ -0.1
LDLR-213ENST00000560502 BTBD1Q9H0C5 482 aa14.42□□□□□ -0.1
LDLR-213ENST00000560502 SGK2Q9HBY8 427 aa14.42□□□□□ -0.1
LDLR-213ENST00000560502 ANKRD6Q9Y2G4 727 aa14.42□□□□□ -0.1
LDLR-213ENST00000560502 M0QYV0 167 aa14.41□□□□□ -0.1
LDLR-213ENST00000560502 FTCDO95954 541 aa14.41□□□□□ -0.1
LDLR-213ENST00000560502 IGHV4-34P06331 123 aa14.41□□□□□ -0.1
LDLR-213ENST00000560502 RRM1P23921 792 aa14.41□□□□□ -0.1
LDLR-213ENST00000560502 SLC6A4P31645 630 aa14.41□□□□□ -0.1
LDLR-213ENST00000560502 PAFAH1B1P43034 410 aa14.41□□□□□ -0.1
LDLR-213ENST00000560502 CTSKP43235 329 aa14.41□□□□□ -0.1
LDLR-213ENST00000560502 GABRB2P47870 512 aa14.41□□□□□ -0.1
LDLR-213ENST00000560502 SUZ12Q15022 739 aaKnown RBP14.41□□□□□ -0.1
LDLR-213ENST00000560502 COL28A1Q2UY09 1125 aa14.41□□□□□ -0.1
LDLR-213ENST00000560502 TTC31Q49AM3 519 aaPredicted RBP14.41□□□□□ -0.1
LDLR-213ENST00000560502 KCNT1Q5JUK3 1230 aa14.41□□□□□ -0.1
LDLR-213ENST00000560502 PIK3R6Q5UE93 754 aa14.41□□□□□ -0.1
LDLR-213ENST00000560502 ZNF776Q68DI1 518 aaPredicted RBP14.41□□□□□ -0.1
LDLR-213ENST00000560502 DENND1BQ6P3S1 775 aa14.41□□□□□ -0.1
LDLR-213ENST00000560502 RFWD3Q6PCD5 774 aa14.41□□□□□ -0.1
LDLR-213ENST00000560502 LAYNQ6UX15 382 aa14.41□□□□□ -0.1
LDLR-213ENST00000560502 MMS22LQ6ZRQ5 1243 aa14.41□□□□□ -0.1
LDLR-213ENST00000560502 UBL4BQ8N7F7 174 aa14.41□□□□□ -0.1
LDLR-213ENST00000560502 SLC35F5Q8WV83 523 aa14.41□□□□□ -0.1
LDLR-213ENST00000560502 IRGQQ8WZA9 623 aa14.41□□□□□ -0.1
LDLR-213ENST00000560502 GOLGA1Q92805 767 aa14.41□□□□□ -0.1
LDLR-213ENST00000560502 TTC17Q96AE7 1141 aa14.41□□□□□ -0.1
LDLR-213ENST00000560502 PRICKLE1Q96MT3 831 aaPredicted RBP14.41□□□□□ -0.1
LDLR-213ENST00000560502 RSPH9Q9H1X1 276 aaPredicted RBP14.41□□□□□ -0.1
LDLR-213ENST00000560502 GOLGA6L7A0A1B0GV03 622 aa14.4□□□□□ -0.1
LDLR-213ENST00000560502 CCDC66A2RUB6 948 aa14.4□□□□□ -0.1
LDLR-213ENST00000560502 CTAGE15A4D2H0 777 aa14.4□□□□□ -0.1
LDLR-213ENST00000560502 H0Y8X5 98 aa14.4□□□□□ -0.1
LDLR-213ENST00000560502 MYO1FO00160 1098 aa14.4□□□□□ -0.1
LDLR-213ENST00000560502 DYNC1I1O14576 645 aa14.4□□□□□ -0.1
LDLR-213ENST00000560502 IRAK2O43187 625 aa14.4□□□□□ -0.1
LDLR-213ENST00000560502 TNFSF14O43557 240 aa14.4□□□□□ -0.1
LDLR-213ENST00000560502 TBL1XO60907 577 aa14.4□□□□□ -0.1
LDLR-213ENST00000560502 CALCAP01258 141 aa14.4□□□□□ -0.1
LDLR-213ENST00000560502 DNTTP04053 509 aa14.4□□□□□ -0.1
LDLR-213ENST00000560502 ATP5BP06576 529 aaKnown RBP14.4□□□□□ -0.1
LDLR-213ENST00000560502 CTAGE8P0CG41 777 aa14.4□□□□□ -0.1
LDLR-213ENST00000560502 SCNN1AP37088 669 aa14.4□□□□□ -0.1
LDLR-213ENST00000560502 GRK6P43250 576 aa14.4□□□□□ -0.1
LDLR-213ENST00000560502 GPD2P43304 727 aa14.4□□□□□ -0.1
LDLR-213ENST00000560502 CCT8P50990 548 aa14.4□□□□□ -0.1
LDLR-213ENST00000560502 PDCLQ13371 301 aa14.4□□□□□ -0.1
LDLR-213ENST00000560502 MAMLD1Q13495 774 aa14.4□□□□□ -0.1
LDLR-213ENST00000560502 CAMK2BQ13554 666 aa14.4□□□□□ -0.1
LDLR-213ENST00000560502 CCDC181Q5TID7 509 aa14.4□□□□□ -0.1
LDLR-213ENST00000560502 NUGGCQ68CJ6 796 aa14.4□□□□□ -0.1
LDLR-213ENST00000560502 NADSYN1Q6IA69 706 aa14.4□□□□□ -0.1
LDLR-213ENST00000560502 DNAJC24Q6P3W2 148 aa14.4□□□□□ -0.1
LDLR-213ENST00000560502 USP30Q70CQ3 517 aa14.4□□□□□ -0.1
LDLR-213ENST00000560502 CTAGE6Q86UF2 777 aa14.4□□□□□ -0.1
LDLR-213ENST00000560502 DNAAF5Q86Y56 855 aa14.4□□□□□ -0.1
LDLR-213ENST00000560502 MARCH9Q86YJ5 346 aa14.4□□□□□ -0.1
LDLR-213ENST00000560502 ZDHHC17Q8IUH5 632 aa14.4□□□□□ -0.1
LDLR-213ENST00000560502 CTAGE4Q8IX94 777 aa14.4□□□□□ -0.1
LDLR-213ENST00000560502 WDTC1Q8N5D0 677 aa14.4□□□□□ -0.1
LDLR-213ENST00000560502 ZNF557Q8N988 423 aaPredicted RBP14.4□□□□□ -0.1
LDLR-213ENST00000560502 FNIP1Q8TF40 1166 aa14.4□□□□□ -0.1
LDLR-213ENST00000560502 AZIN2Q96A70 460 aa14.4□□□□□ -0.1
LDLR-213ENST00000560502 C18orf8Q96DM3 657 aa14.4□□□□□ -0.1
LDLR-213ENST00000560502 CARD6Q9BX69 1037 aa14.4□□□□□ -0.1
LDLR-213ENST00000560502 CARD9Q9H257 536 aa14.4□□□□□ -0.1
LDLR-213ENST00000560502 PABPC3Q9H361 631 aaKnown RBP14.4□□□□□ -0.1
LDLR-213ENST00000560502 MTG2Q9H4K7 406 aa14.4□□□□□ -0.1
LDLR-213ENST00000560502 SCUBE2Q9NQ36 999 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms