RNA–Protein interactions for RNA: ENST00000560492.1

CDC42BPB-207, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-207ENST00000560492 VAC14Q08AM6 782 aa10.77□□□□□ -0.69
CDC42BPB-207ENST00000560492 ZNF177Q13360 481 aaPredicted RBP10.77□□□□□ -0.69
CDC42BPB-207ENST00000560492 PNOCQ13519 176 aa10.77□□□□□ -0.69
CDC42BPB-207ENST00000560492 ZSCAN23Q3MJ62 389 aa10.77□□□□□ -0.69
CDC42BPB-207ENST00000560492 ANKRD40Q6AI12 368 aa10.77□□□□□ -0.69
CDC42BPB-207ENST00000560492 OR6B2Q6IFH4 312 aa10.77□□□□□ -0.69
CDC42BPB-207ENST00000560492 PCSK4Q6UW60 755 aa10.77□□□□□ -0.69
CDC42BPB-207ENST00000560492 UBR7Q8N806 425 aa10.77□□□□□ -0.69
CDC42BPB-207ENST00000560492 ATP11CQ8NB49 1132 aa10.77□□□□□ -0.69
CDC42BPB-207ENST00000560492 IFI44Q8TCB0 444 aa10.77□□□□□ -0.69
CDC42BPB-207ENST00000560492 FRS2Q8WU20 508 aa10.77□□□□□ -0.69
CDC42BPB-207ENST00000560492 POPDC2Q9HBU9 364 aa10.77□□□□□ -0.69
CDC42BPB-207ENST00000560492 KLHL11Q9NVR0 708 aa10.77□□□□□ -0.69
CDC42BPB-207ENST00000560492 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.77□□□□□ -0.69
CDC42BPB-207ENST00000560492 DDIT4Q9NX09 232 aa10.77□□□□□ -0.69
CDC42BPB-207ENST00000560492 VANGL2Q9ULK5 521 aa10.77□□□□□ -0.69
CDC42BPB-207ENST00000560492 SATB2Q9UPW6 733 aa10.77□□□□□ -0.69
CDC42BPB-207ENST00000560492 COL6A6A6NMZ7 2263 aa10.77□□□□□ -0.69
CDC42BPB-207ENST00000560492 A6NNZ2 444 aa10.76□□□□□ -0.69
CDC42BPB-207ENST00000560492 E5RJQ4 531 aa10.76□□□□□ -0.69
CDC42BPB-207ENST00000560492 H3BM21 787 aa10.76□□□□□ -0.69
CDC42BPB-207ENST00000560492 MCF2LO15068 1137 aa10.76□□□□□ -0.69
CDC42BPB-207ENST00000560492 ALOX15BO15296 676 aa10.76□□□□□ -0.69
CDC42BPB-207ENST00000560492 THAP12O43422 761 aa10.76□□□□□ -0.69
CDC42BPB-207ENST00000560492 MED7O43513 233 aa10.76□□□□□ -0.69
CDC42BPB-207ENST00000560492 LETM1O95202 739 aaPredicted RBP10.76□□□□□ -0.69
CDC42BPB-207ENST00000560492 SLC2A3P11169 496 aa10.76□□□□□ -0.69
CDC42BPB-207ENST00000560492 KRT10P13645 584 aa10.76□□□□□ -0.69
CDC42BPB-207ENST00000560492 C6P13671 934 aa10.76□□□□□ -0.69
CDC42BPB-207ENST00000560492 CCR1P32246 355 aa10.76□□□□□ -0.69
CDC42BPB-207ENST00000560492 RECQLP46063 649 aaPredicted RBP10.76□□□□□ -0.69
CDC42BPB-207ENST00000560492 LSSP48449 732 aa10.76□□□□□ -0.69
CDC42BPB-207ENST00000560492 ERVPABLB-1P60509 514 aa10.76□□□□□ -0.69
CDC42BPB-207ENST00000560492 HNRNPKP61978 463 aaKnown RBP eCLIP10.76□□□□□ -0.69
CDC42BPB-207ENST00000560492 YWHAZP63104 245 aaKnown RBP10.76□□□□□ -0.69
CDC42BPB-207ENST00000560492 KRT83P78385 493 aa10.76□□□□□ -0.69
CDC42BPB-207ENST00000560492 KCNC4Q03721 635 aa10.76□□□□□ -0.69
CDC42BPB-207ENST00000560492 NME3Q13232 169 aa10.76□□□□□ -0.69
CDC42BPB-207ENST00000560492 STIM1Q13586 685 aa10.76□□□□□ -0.69
CDC42BPB-207ENST00000560492 CDKN3Q16667 212 aa10.76□□□□□ -0.69
CDC42BPB-207ENST00000560492 KIAA1614Q5VZ46 1190 aa10.76□□□□□ -0.69
CDC42BPB-207ENST00000560492 CXorf57Q6NSI4 855 aaKnown RBP10.76□□□□□ -0.69
CDC42BPB-207ENST00000560492 DENND1BQ6P3S1 775 aa10.76□□□□□ -0.69
CDC42BPB-207ENST00000560492 CRTC1Q6UUV9 634 aa10.76□□□□□ -0.69
CDC42BPB-207ENST00000560492 HORMAD1Q86X24 394 aa10.76□□□□□ -0.69
CDC42BPB-207ENST00000560492 GRIN3AQ8TCU5 1115 aa10.76□□□□□ -0.69
CDC42BPB-207ENST00000560492 SLC35C1Q96A29 364 aa10.76□□□□□ -0.69
CDC42BPB-207ENST00000560492 CCDC97Q96F63 343 aaPredicted RBP10.76□□□□□ -0.69
CDC42BPB-207ENST00000560492 MED15Q96RN5 788 aa10.76□□□□□ -0.69
CDC42BPB-207ENST00000560492 ZSWIM1Q9BR11 485 aa10.76□□□□□ -0.69
CDC42BPB-207ENST00000560492 DUSP23Q9BVJ7 150 aa10.76□□□□□ -0.69
CDC42BPB-207ENST00000560492 SLC4A5Q9BY07 1137 aa10.76□□□□□ -0.69
CDC42BPB-207ENST00000560492 DPH1Q9BZG8 443 aa10.76□□□□□ -0.69
CDC42BPB-207ENST00000560492 SEMA4CQ9C0C4 833 aa10.76□□□□□ -0.69
CDC42BPB-207ENST00000560492 SIK2Q9H0K1 926 aa10.76□□□□□ -0.69
CDC42BPB-207ENST00000560492 GOLPH3LQ9H4A5 285 aa10.76□□□□□ -0.69
CDC42BPB-207ENST00000560492 CAAP1Q9H8G2 361 aa10.76□□□□□ -0.69
CDC42BPB-207ENST00000560492 METTL14Q9HCE5 456 aaKnown RBP10.76□□□□□ -0.69
CDC42BPB-207ENST00000560492 NLGN3Q9NZ94 848 aa10.76□□□□□ -0.69
CDC42BPB-207ENST00000560492 PPM1HQ9ULR3 514 aa10.76□□□□□ -0.69
CDC42BPB-207ENST00000560492 HEMK1Q9Y5R4 338 aaPredicted RBP10.76□□□□□ -0.69
CDC42BPB-207ENST00000560492 KIF26BQ2KJY2 2108 aa10.76□□□□□ -0.69
CDC42BPB-207ENST00000560492 CFAP46Q8IYW2 2715 aa10.75□□□□□ -0.69
CDC42BPB-207ENST00000560492 B8ZZF3 427 aa10.75□□□□□ -0.69
CDC42BPB-207ENST00000560492 ATP9BO43861 1147 aa10.75□□□□□ -0.69
CDC42BPB-207ENST00000560492 GRAP2O75791 330 aa10.75□□□□□ -0.69
CDC42BPB-207ENST00000560492 ENDOD1O94919 500 aa10.75□□□□□ -0.69
CDC42BPB-207ENST00000560492 GP1BAP07359 652 aa10.75□□□□□ -0.69
CDC42BPB-207ENST00000560492 RHOCP08134 193 aa10.75□□□□□ -0.69
CDC42BPB-207ENST00000560492 CHRNA3P32297 505 aa10.75□□□□□ -0.69
CDC42BPB-207ENST00000560492 USP8P40818 1118 aa10.75□□□□□ -0.69
CDC42BPB-207ENST00000560492 DNA2P51530 1060 aa10.75□□□□□ -0.69
CDC42BPB-207ENST00000560492 PMS1P54277 932 aaKnown RBP10.75□□□□□ -0.69
CDC42BPB-207ENST00000560492 TAS2R38P59533 333 aa10.75□□□□□ -0.69
CDC42BPB-207ENST00000560492 PITX1P78337 314 aaPredicted RBP10.75□□□□□ -0.69
CDC42BPB-207ENST00000560492 LRRC63Q05C16 580 aa10.75□□□□□ -0.69
CDC42BPB-207ENST00000560492 PIP5KL1Q5T9C9 394 aa10.75□□□□□ -0.69
CDC42BPB-207ENST00000560492 ZNF658Q5TYW1 1059 aaPredicted RBP10.75□□□□□ -0.69
CDC42BPB-207ENST00000560492 FBXL22Q6P050 247 aa10.75□□□□□ -0.69
CDC42BPB-207ENST00000560492 CCDC81Q6ZN84 652 aa10.75□□□□□ -0.69
CDC42BPB-207ENST00000560492 Q6ZSR6 202 aa10.75□□□□□ -0.69
CDC42BPB-207ENST00000560492 EFL1Q7Z2Z2 1120 aaKnown RBP10.75□□□□□ -0.69
CDC42BPB-207ENST00000560492 ARHGEF19Q8IW93 802 aa10.75□□□□□ -0.69
CDC42BPB-207ENST00000560492 SH2D3CQ8N5H7 860 aa10.75□□□□□ -0.69
CDC42BPB-207ENST00000560492 TMEM145Q8NBT3 493 aa10.75□□□□□ -0.69
CDC42BPB-207ENST00000560492 SNX21Q969T3 373 aa10.75□□□□□ -0.69
CDC42BPB-207ENST00000560492 ARRDC3Q96B67 414 aa10.75□□□□□ -0.69
CDC42BPB-207ENST00000560492 WBP1Q96G27 269 aa10.75□□□□□ -0.69
CDC42BPB-207ENST00000560492 ATXN7L3BQ96GX2 97 aa10.75□□□□□ -0.69
CDC42BPB-207ENST00000560492 PPP1R16AQ96I34 528 aa10.75□□□□□ -0.69
CDC42BPB-207ENST00000560492 HIC2Q96JB3 615 aa10.75□□□□□ -0.69
CDC42BPB-207ENST00000560492 NOX5Q96PH1 765 aa10.75□□□□□ -0.69
CDC42BPB-207ENST00000560492 FEM1AQ9BSK4 669 aa10.75□□□□□ -0.69
CDC42BPB-207ENST00000560492 GTPBP4Q9BZE4 634 aaKnown RBP10.75□□□□□ -0.69
CDC42BPB-207ENST00000560492 FAM117AQ9C073 453 aa10.75□□□□□ -0.69
CDC42BPB-207ENST00000560492 THAP9Q9H5L6 903 aa10.75□□□□□ -0.69
CDC42BPB-207ENST00000560492 GOLGA6L4A6NEF3 574 aa10.74□□□□□ -0.69
CDC42BPB-207ENST00000560492 BHMG1C9JSJ3 638 aaPredicted RBP10.74□□□□□ -0.69
CDC42BPB-207ENST00000560492 K7ESM1 405 aa10.74□□□□□ -0.69
CDC42BPB-207ENST00000560492 PSMA7O14818 248 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms