RNA–Protein interactions for RNA: ENST00000560435.1

SPG11-222, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 413 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-222ENST00000560435 GRK5P34947 590 aa2.91□□□□□ -1.94
SPG11-222ENST00000560435 CYP2J2P51589 502 aa2.91□□□□□ -1.94
SPG11-222ENST00000560435 PMP22Q01453 160 aa2.91□□□□□ -1.94
SPG11-222ENST00000560435 SLC1A5Q15758 541 aa2.91□□□□□ -1.94
SPG11-222ENST00000560435 MAPKAPK3Q16644 382 aa2.91□□□□□ -1.94
SPG11-222ENST00000560435 ACCSLQ4AC99 568 aa2.91□□□□□ -1.94
SPG11-222ENST00000560435 FAM72AQ5TYM5 149 aa2.91□□□□□ -1.94
SPG11-222ENST00000560435 KLHDC7AQ5VTJ3 777 aa2.91□□□□□ -1.94
SPG11-222ENST00000560435 FAM72DQ6L9T8 149 aa2.91□□□□□ -1.94
SPG11-222ENST00000560435 FOXL2NBQ6ZUU3 175 aa2.91□□□□□ -1.94
SPG11-222ENST00000560435 SH2D6Q7Z4S9 175 aa2.91□□□□□ -1.94
SPG11-222ENST00000560435 FAM72BQ86X60 149 aa2.91□□□□□ -1.94
SPG11-222ENST00000560435 ZDHHC23Q8IYP9 409 aa2.91□□□□□ -1.94
SPG11-222ENST00000560435 USP13Q92995 863 aaPredicted RBP2.91□□□□□ -1.94
SPG11-222ENST00000560435 MCRS1Q96EZ8 462 aa2.91□□□□□ -1.94
SPG11-222ENST00000560435 ARL15Q9NXU5 204 aa2.91□□□□□ -1.94
SPG11-222ENST00000560435 NOB1Q9ULX3 412 aaKnown RBP2.91□□□□□ -1.94
SPG11-222ENST00000560435 CA14Q9ULX7 337 aa2.91□□□□□ -1.94
SPG11-222ENST00000560435 PKP3Q9Y446 797 aa2.91□□□□□ -1.94
SPG11-222ENST00000560435 IGHV4OR15-8A0A075B7B6 117 aa2.9□□□□□ -1.95
SPG11-222ENST00000560435 TCRBV7S3A2A0A539 114 aa2.9□□□□□ -1.95
SPG11-222ENST00000560435 DYTNA2CJ06 578 aa2.9□□□□□ -1.95
SPG11-222ENST00000560435 C17orf102A2RUQ5 167 aa2.9□□□□□ -1.95
SPG11-222ENST00000560435 HSPB6O14558 160 aa2.9□□□□□ -1.95
SPG11-222ENST00000560435 CLDN7O95471 211 aa2.9□□□□□ -1.95
SPG11-222ENST00000560435 CRYAAP02489 173 aa2.9□□□□□ -1.95
SPG11-222ENST00000560435 AMBPP02760 352 aa2.9□□□□□ -1.95
SPG11-222ENST00000560435 CTTNQ14247 550 aaKnown RBP2.9□□□□□ -1.95
SPG11-222ENST00000560435 MYBPC2Q14324 1141 aa2.9□□□□□ -1.95
SPG11-222ENST00000560435 PTPROQ16827 1216 aa2.9□□□□□ -1.95
SPG11-222ENST00000560435 XKR9Q5GH70 373 aa2.9□□□□□ -1.95
SPG11-222ENST00000560435 FAM171A1Q5VUB5 890 aa2.9□□□□□ -1.95
SPG11-222ENST00000560435 RHBDF2Q6PJF5 856 aa2.9□□□□□ -1.95
SPG11-222ENST00000560435 SLC30A9Q6PML9 568 aa2.9□□□□□ -1.95
SPG11-222ENST00000560435 TMEM200AQ86VY9 491 aa2.9□□□□□ -1.95
SPG11-222ENST00000560435 ZNF385AQ96PM9 386 aaKnown RBP2.9□□□□□ -1.95
SPG11-222ENST00000560435 ZNF696Q9H7X3 374 aa2.9□□□□□ -1.95
SPG11-222ENST00000560435 HELLSQ9NRZ9 838 aa2.9□□□□□ -1.95
SPG11-222ENST00000560435 RGL1Q9NZL6 768 aa2.9□□□□□ -1.95
SPG11-222ENST00000560435 SEL1LQ9UBV2 794 aa2.9□□□□□ -1.95
SPG11-222ENST00000560435 RAB21Q9UL25 225 aa2.9□□□□□ -1.95
SPG11-222ENST00000560435 SLC12A4Q9UP95 1085 aa2.9□□□□□ -1.95
SPG11-222ENST00000560435 CORO2BQ9UQ03 480 aa2.9□□□□□ -1.95
SPG11-222ENST00000560435 NOP58Q9Y2X3 529 aaKnown RBP2.9□□□□□ -1.95
SPG11-222ENST00000560435 COPG1Q9Y678 874 aaKnown RBP2.9□□□□□ -1.95
SPG11-222ENST00000560435 A0A1W2PPC4 97 aa2.89□□□□□ -1.95
SPG11-222ENST00000560435 EXTL3O43909 919 aa2.89□□□□□ -1.95
SPG11-222ENST00000560435 FGF17O60258 216 aa2.89□□□□□ -1.95
SPG11-222ENST00000560435 IGSF3O75054 1194 aa2.89□□□□□ -1.95
SPG11-222ENST00000560435 SLC22A3O75751 556 aa2.89□□□□□ -1.95
SPG11-222ENST00000560435 NDST3O95803 873 aa2.89□□□□□ -1.95
SPG11-222ENST00000560435 CER1O95813 267 aa2.89□□□□□ -1.95
SPG11-222ENST00000560435 MMP3P08254 477 aa2.89□□□□□ -1.95
SPG11-222ENST00000560435 PDGFRBP09619 1106 aa2.89□□□□□ -1.95
SPG11-222ENST00000560435 PEPDP12955 493 aa2.89□□□□□ -1.95
SPG11-222ENST00000560435 PRKCHP24723 683 aa2.89□□□□□ -1.95
SPG11-222ENST00000560435 PIK3CBP42338 1070 aa2.89□□□□□ -1.95
SPG11-222ENST00000560435 KRTAP13-3Q3SY46 172 aa2.89□□□□□ -1.95
SPG11-222ENST00000560435 C5orf22Q49AR2 442 aa2.89□□□□□ -1.95
SPG11-222ENST00000560435 PLA2G4FQ68DD2 849 aa2.89□□□□□ -1.95
SPG11-222ENST00000560435 NXNQ6DKJ4 435 aa2.89□□□□□ -1.95
SPG11-222ENST00000560435 TRABD2AQ86V40 505 aa2.89□□□□□ -1.95
SPG11-222ENST00000560435 PGBD5Q8N414 524 aa2.89□□□□□ -1.95
SPG11-222ENST00000560435 RNF152Q8N8N0 203 aa2.89□□□□□ -1.95
SPG11-222ENST00000560435 RFWD2Q8NHY2 731 aa2.89□□□□□ -1.95
SPG11-222ENST00000560435 REXO5Q96IC2 774 aaKnown RBP2.89□□□□□ -1.95
SPG11-222ENST00000560435 GDF15Q99988 308 aa2.89□□□□□ -1.95
SPG11-222ENST00000560435 RBM4Q9BWF3 364 aaKnown RBP2.89□□□□□ -1.95
SPG11-222ENST00000560435 EIF2AQ9BY44 585 aaKnown RBP2.89□□□□□ -1.95
SPG11-222ENST00000560435 EBF2Q9HAK2 575 aa2.89□□□□□ -1.95
SPG11-222ENST00000560435 Q9N2J8 555 aa2.89□□□□□ -1.95
SPG11-222ENST00000560435 TRPC5Q9UL62 973 aaPredicted RBP2.89□□□□□ -1.95
SPG11-222ENST00000560435 CNTN6Q9UQ52 1028 aa2.89□□□□□ -1.95
SPG11-222ENST00000560435 DTNAQ9Y4J8 743 aa2.89□□□□□ -1.95
SPG11-222ENST00000560435 PCDHGB6Q9Y5F9 930 aa2.89□□□□□ -1.95
SPG11-222ENST00000560435 A0A1B0GVM2 712 aa2.88□□□□□ -1.95
SPG11-222ENST00000560435 RHPN2P1A8MT19 583 aa2.88□□□□□ -1.95
SPG11-222ENST00000560435 ZNF500O60304 480 aaPredicted RBP2.88□□□□□ -1.95
SPG11-222ENST00000560435 IBSPP21815 317 aaPredicted RBP2.88□□□□□ -1.95
SPG11-222ENST00000560435 ZNF543Q08ER8 600 aa2.88□□□□□ -1.95
SPG11-222ENST00000560435 SETMARQ53H47 684 aaPredicted RBP2.88□□□□□ -1.95
SPG11-222ENST00000560435 TYW3Q6IPR3 259 aaKnown RBP2.88□□□□□ -1.95
SPG11-222ENST00000560435 PATL1Q86TB9 770 aaKnown RBP2.88□□□□□ -1.95
SPG11-222ENST00000560435 TCEAL8Q8IYN2 117 aa2.88□□□□□ -1.95
SPG11-222ENST00000560435 MAGEB6Q8N7X4 407 aa2.88□□□□□ -1.95
SPG11-222ENST00000560435 GLIS1Q8NBF1 620 aa2.88□□□□□ -1.95
SPG11-222ENST00000560435 STAG1Q8WVM7 1258 aa2.88□□□□□ -1.95
SPG11-222ENST00000560435 COLEC11Q9BWP8 271 aa2.88□□□□□ -1.95
SPG11-222ENST00000560435 TMEM120AQ9BXJ8 343 aa2.88□□□□□ -1.95
SPG11-222ENST00000560435 ZNF334Q9HCZ1 680 aaPredicted RBP2.88□□□□□ -1.95
SPG11-222ENST00000560435 TBC1D3DA0A087WVF3 549 aa2.87□□□□□ -1.95
SPG11-222ENST00000560435 TBC1D3IA0A087WXS9 549 aa2.87□□□□□ -1.95
SPG11-222ENST00000560435 TBC1D3EA0A087X179 549 aa2.87□□□□□ -1.95
SPG11-222ENST00000560435 TBC1D3KA0A087X1G2 549 aa2.87□□□□□ -1.95
SPG11-222ENST00000560435 TBC1D3BA6NDS4 549 aa2.87□□□□□ -1.95
SPG11-222ENST00000560435 TBC1D3FA6NER0 549 aaPredicted RBP2.87□□□□□ -1.95
SPG11-222ENST00000560435 POM121BA6NF01 834 aa2.87□□□□□ -1.95
SPG11-222ENST00000560435 KDM4EB2RXH2 506 aaPredicted RBP2.87□□□□□ -1.95
SPG11-222ENST00000560435 TBC1D3LB9A6J9 549 aa2.87□□□□□ -1.95
SPG11-222ENST00000560435 RNMTO43148 476 aaKnown RBP2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms