RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 FGD2Q7Z6J4 655 aa13.65□□□□□ -0.22
TRAF3-208ENST00000560371 RIN3Q8TB24 985 aa13.65□□□□□ -0.22
TRAF3-208ENST00000560371 QRFPRQ96P65 431 aa13.65□□□□□ -0.22
TRAF3-208ENST00000560371 ASB2Q96Q27 587 aa13.65□□□□□ -0.22
TRAF3-208ENST00000560371 DEPDC7Q96QD5 511 aa13.65□□□□□ -0.22
TRAF3-208ENST00000560371 SEMA3CQ99985 751 aa13.65□□□□□ -0.22
TRAF3-208ENST00000560371 TNPO3Q9Y5L0 923 aaKnown RBP13.65□□□□□ -0.22
TRAF3-208ENST00000560371 CES2O00748 559 aa13.65□□□□□ -0.22
TRAF3-208ENST00000560371 ASGR1P07306 291 aa13.65□□□□□ -0.22
TRAF3-208ENST00000560371 SELPP16109 830 aa13.65□□□□□ -0.22
TRAF3-208ENST00000560371 DNAJC9Q8WXX5 260 aa13.65□□□□□ -0.22
TRAF3-208ENST00000560371 RSPH1Q8WYR4 309 aa13.65□□□□□ -0.22
TRAF3-208ENST00000560371 LRRC39Q96DD0 335 aa13.65□□□□□ -0.22
TRAF3-208ENST00000560371 TPD52L3Q96J77 140 aa13.65□□□□□ -0.22
TRAF3-208ENST00000560371 NRDE2Q9H7Z3 1164 aa13.65□□□□□ -0.22
TRAF3-208ENST00000560371 USP2O75604 605 aaPredicted RBP13.65□□□□□ -0.22
TRAF3-208ENST00000560371 TLX1P31314 330 aaPredicted RBP13.65□□□□□ -0.22
TRAF3-208ENST00000560371 HSPA13P48723 471 aa13.65□□□□□ -0.22
TRAF3-208ENST00000560371 CCR4P51679 360 aa13.65□□□□□ -0.22
TRAF3-208ENST00000560371 SDHAF4Q5VUM1 108 aa13.65□□□□□ -0.22
TRAF3-208ENST00000560371 ZNF621Q6ZSS3 439 aa13.65□□□□□ -0.22
TRAF3-208ENST00000560371 GLIS3Q8NEA6 775 aa13.65□□□□□ -0.22
TRAF3-208ENST00000560371 TRIM8Q9BZR9 551 aa13.65□□□□□ -0.22
TRAF3-208ENST00000560371 ZNF232Q9UNY5 417 aa13.65□□□□□ -0.22
TRAF3-208ENST00000560371 PECAM1P16284 738 aaPredicted RBP13.64□□□□□ -0.23
TRAF3-208ENST00000560371 MRPS15P82914 257 aaKnown RBP13.64□□□□□ -0.23
TRAF3-208ENST00000560371 CAPRIN2Q6IMN6 1127 aaKnown RBP13.64□□□□□ -0.23
TRAF3-208ENST00000560371 KDM7AQ6ZMT4 941 aa13.64□□□□□ -0.23
TRAF3-208ENST00000560371 KRT77Q7Z794 578 aa13.64□□□□□ -0.23
TRAF3-208ENST00000560371 FAM71AQ8IYT1 594 aa13.64□□□□□ -0.23
TRAF3-208ENST00000560371 STARD8Q92502 1023 aa13.64□□□□□ -0.23
TRAF3-208ENST00000560371 PARP4Q9UKK3 1724 aaKnown RBP13.64□□□□□ -0.23
TRAF3-208ENST00000560371 SMIM22K7EJ46 135 aa13.64□□□□□ -0.23
TRAF3-208ENST00000560371 TREHO43280 583 aa13.64□□□□□ -0.23
TRAF3-208ENST00000560371 C9orf57Q5W0N0 161 aa13.64□□□□□ -0.23
TRAF3-208ENST00000560371 PHACTR1Q9C0D0 580 aa13.64□□□□□ -0.23
TRAF3-208ENST00000560371 A0A087X1B8 175 aa13.64□□□□□ -0.23
TRAF3-208ENST00000560371 SGTAO43765 313 aa13.64□□□□□ -0.23
TRAF3-208ENST00000560371 FGBP02675 491 aa13.64□□□□□ -0.23
TRAF3-208ENST00000560371 GRM5P41594 1212 aa13.64□□□□□ -0.23
TRAF3-208ENST00000560371 RPL21P46778 160 aaKnown RBP13.64□□□□□ -0.23
TRAF3-208ENST00000560371 SULT2A1Q06520 285 aa13.64□□□□□ -0.23
TRAF3-208ENST00000560371 SPIDRQ14159 915 aa13.64□□□□□ -0.23
TRAF3-208ENST00000560371 ZNF786Q8N393 782 aa13.64□□□□□ -0.23
TRAF3-208ENST00000560371 TCP10LQ8TDR4 215 aa13.64□□□□□ -0.23
TRAF3-208ENST00000560371 MTFMTQ96DP5 389 aaKnown RBP13.64□□□□□ -0.23
TRAF3-208ENST00000560371 CATSPER2Q96P56 530 aa13.64□□□□□ -0.23
TRAF3-208ENST00000560371 TMBIM4Q9HC24 238 aa13.64□□□□□ -0.23
TRAF3-208ENST00000560371 KLHL20Q9Y2M5 609 aa13.64□□□□□ -0.23
TRAF3-208ENST00000560371 NDUFAF1Q9Y375 327 aa13.64□□□□□ -0.23
TRAF3-208ENST00000560371 FMN2Q9NZ56 1722 aa13.64□□□□□ -0.23
TRAF3-208ENST00000560371 QSOX1O00391 747 aa13.64□□□□□ -0.23
TRAF3-208ENST00000560371 B4GALT5O43286 388 aa13.64□□□□□ -0.23
TRAF3-208ENST00000560371 HS6ST1O60243 411 aa13.64□□□□□ -0.23
TRAF3-208ENST00000560371 SERPINE1P05121 402 aa13.64□□□□□ -0.23
TRAF3-208ENST00000560371 ADRB2P07550 413 aa13.64□□□□□ -0.23
TRAF3-208ENST00000560371 ANXA5P08758 320 aa13.64□□□□□ -0.23
TRAF3-208ENST00000560371 ACSM2AQ08AH3 577 aa13.64□□□□□ -0.23
TRAF3-208ENST00000560371 PEX6Q13608 980 aa13.64□□□□□ -0.23
TRAF3-208ENST00000560371 PFKFB4Q16877 469 aa13.64□□□□□ -0.23
TRAF3-208ENST00000560371 FBXW10Q5XX13 1052 aa13.64□□□□□ -0.23
TRAF3-208ENST00000560371 ACSM2BQ68CK6 577 aa13.64□□□□□ -0.23
TRAF3-208ENST00000560371 IL27RAQ6UWB1 636 aa13.64□□□□□ -0.23
TRAF3-208ENST00000560371 C16orf62Q7Z3J2 963 aa13.64□□□□□ -0.23
TRAF3-208ENST00000560371 SLC9A9Q8IVB4 645 aa13.64□□□□□ -0.23
TRAF3-208ENST00000560371 TMEM132CQ8N3T6 1108 aa13.64□□□□□ -0.23
TRAF3-208ENST00000560371 OR8D1Q8WZ84 308 aa13.64□□□□□ -0.23
TRAF3-208ENST00000560371 UBE2E3Q969T4 207 aa13.64□□□□□ -0.23
TRAF3-208ENST00000560371 PAPOLBQ9NRJ5 636 aaKnown RBP13.64□□□□□ -0.23
TRAF3-208ENST00000560371 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.64□□□□□ -0.23
TRAF3-208ENST00000560371 RPTORQ8N122 1335 aa13.64□□□□□ -0.23
TRAF3-208ENST00000560371 FGF19O95750 216 aa13.64□□□□□ -0.23
TRAF3-208ENST00000560371 RTP1P59025 263 aa13.64□□□□□ -0.23
TRAF3-208ENST00000560371 ATAT1Q5SQI0 421 aa13.64□□□□□ -0.23
TRAF3-208ENST00000560371 KIAA2013Q8IYS2 634 aa13.64□□□□□ -0.23
TRAF3-208ENST00000560371 RHBGQ9H310 441 aa13.64□□□□□ -0.23
TRAF3-208ENST00000560371 CCDC167Q9P0B6 97 aa13.64□□□□□ -0.23
TRAF3-208ENST00000560371 PTCH2Q9Y6C5 1203 aa13.64□□□□□ -0.23
TRAF3-208ENST00000560371 CNTNAP1P78357 1384 aa13.64□□□□□ -0.23
TRAF3-208ENST00000560371 MEI4A8MW99 385 aa13.64□□□□□ -0.23
TRAF3-208ENST00000560371 RIPK2O43353 540 aa13.64□□□□□ -0.23
TRAF3-208ENST00000560371 DNTTP04053 509 aa13.64□□□□□ -0.23
TRAF3-208ENST00000560371 LAG3P18627 525 aa13.64□□□□□ -0.23
TRAF3-208ENST00000560371 CXCR2P25025 360 aa13.64□□□□□ -0.23
TRAF3-208ENST00000560371 RAD23AP54725 363 aa13.64□□□□□ -0.23
TRAF3-208ENST00000560371 C1DQ13901 141 aaKnown RBP13.64□□□□□ -0.23
TRAF3-208ENST00000560371 SHROOM1Q2M3G4 852 aaPredicted RBP13.64□□□□□ -0.23
TRAF3-208ENST00000560371 ZACNQ401N2 412 aa13.64□□□□□ -0.23
TRAF3-208ENST00000560371 STAG3L4Q8TBR4 150 aa13.64□□□□□ -0.23
TRAF3-208ENST00000560371 SPPL2BQ8TCT7 592 aa13.64□□□□□ -0.23
TRAF3-208ENST00000560371 TMEM120AQ9BXJ8 343 aa13.64□□□□□ -0.23
TRAF3-208ENST00000560371 DUSP16Q9BY84 665 aa13.64□□□□□ -0.23
TRAF3-208ENST00000560371 ACP6Q9NPH0 428 aa13.64□□□□□ -0.23
TRAF3-208ENST00000560371 ETNK2Q9NVF9 386 aa13.64□□□□□ -0.23
TRAF3-208ENST00000560371 POLR1DQ9Y2S0 133 aa13.64□□□□□ -0.23
TRAF3-208ENST00000560371 MATKP42679 507 aa13.63□□□□□ -0.23
TRAF3-208ENST00000560371 PCID2Q5JVF3 399 aa13.63□□□□□ -0.23
TRAF3-208ENST00000560371 MTDHQ86UE4 582 aaKnown RBP13.63□□□□□ -0.23
TRAF3-208ENST00000560371 OR52K1Q8NGK4 314 aa13.63□□□□□ -0.23
TRAF3-208ENST00000560371 ATL1Q8WXF7 558 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms