RNA–Protein interactions for RNA: ENST00000559831.5

TPM1-221, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-221ENST00000559831 CISD3P0C7P0 127 aa10.64□□□□□ -0.71
TPM1-221ENST00000559831 CCNB1P14635 433 aa10.64□□□□□ -0.71
TPM1-221ENST00000559831 POLR2EP19388 210 aaKnown RBP10.64□□□□□ -0.71
TPM1-221ENST00000559831 ARF5P84085 180 aa10.64□□□□□ -0.71
TPM1-221ENST00000559831 ZNF33AQ06730 810 aa10.64□□□□□ -0.71
TPM1-221ENST00000559831 ITKQ08881 620 aa10.64□□□□□ -0.71
TPM1-221ENST00000559831 WASHC5Q12768 1159 aa10.64□□□□□ -0.71
TPM1-221ENST00000559831 GPS1Q13098 491 aa10.64□□□□□ -0.71
TPM1-221ENST00000559831 PTK6Q13882 451 aa10.64□□□□□ -0.71
TPM1-221ENST00000559831 ZNF235Q14590 738 aa10.64□□□□□ -0.71
TPM1-221ENST00000559831 GEN1Q17RS7 908 aa10.64□□□□□ -0.71
TPM1-221ENST00000559831 GLE1Q53GS7 698 aaKnown RBP10.64□□□□□ -0.71
TPM1-221ENST00000559831 ANKRD20A2Q5SQ80 823 aa10.64□□□□□ -0.71
TPM1-221ENST00000559831 TMCO4Q5TGY1 634 aa10.64□□□□□ -0.71
TPM1-221ENST00000559831 ANKRD20A1Q5TYW2 823 aa10.64□□□□□ -0.71
TPM1-221ENST00000559831 ANKRD20A3Q5VUR7 823 aa10.64□□□□□ -0.71
TPM1-221ENST00000559831 MBLAC2Q68D91 279 aa10.64□□□□□ -0.71
TPM1-221ENST00000559831 NAIF1Q69YI7 327 aaPredicted RBP10.64□□□□□ -0.71
TPM1-221ENST00000559831 ARHGEF18Q6ZSZ5 1173 aa10.64□□□□□ -0.71
TPM1-221ENST00000559831 SYDE1Q6ZW31 735 aaPredicted RBP10.64□□□□□ -0.71
TPM1-221ENST00000559831 ETFBKMTQ8IXQ9 262 aa10.64□□□□□ -0.71
TPM1-221ENST00000559831 AHI1Q8N157 1196 aa10.64□□□□□ -0.71
TPM1-221ENST00000559831 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.64□□□□□ -0.71
TPM1-221ENST00000559831 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.64□□□□□ -0.71
TPM1-221ENST00000559831 WFIKKN2Q8TEU8 576 aa10.64□□□□□ -0.71
TPM1-221ENST00000559831 SLCO2A1Q92959 643 aa10.64□□□□□ -0.71
TPM1-221ENST00000559831 AGAP3Q96P47 875 aa10.64□□□□□ -0.71
TPM1-221ENST00000559831 C2orf49Q9BVC5 232 aaPredicted RBP10.64□□□□□ -0.71
TPM1-221ENST00000559831 EPC1Q9H2F5 836 aa10.64□□□□□ -0.71
TPM1-221ENST00000559831 DPH5Q9H2P9 285 aa10.64□□□□□ -0.71
TPM1-221ENST00000559831 PCDH9Q9HC56 1237 aa10.64□□□□□ -0.71
TPM1-221ENST00000559831 NT5MQ9NPB1 228 aa10.64□□□□□ -0.71
TPM1-221ENST00000559831 RBM22Q9NW64 420 aaKnown RBP eCLIP10.64□□□□□ -0.71
TPM1-221ENST00000559831 DEC1Q9P2X7 70 aa10.64□□□□□ -0.71
TPM1-221ENST00000559831 SLC25A13Q9UJS0 675 aa10.64□□□□□ -0.71
TPM1-221ENST00000559831 INTS6Q9UL03 887 aaKnown RBP10.64□□□□□ -0.71
TPM1-221ENST00000559831 UTP11Q9Y3A2 253 aaKnown RBP10.64□□□□□ -0.71
TPM1-221ENST00000559831 ATG2BQ96BY7 2078 aa10.64□□□□□ -0.71
TPM1-221ENST00000559831 A0A0A0MRY4 1105 aa10.63□□□□□ -0.71
TPM1-221ENST00000559831 C5orf60A6NFR6 353 aa10.63□□□□□ -0.71
TPM1-221ENST00000559831 ZSCAN5CA6NGD5 496 aaPredicted RBP10.63□□□□□ -0.71
TPM1-221ENST00000559831 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.63□□□□□ -0.71
TPM1-221ENST00000559831 GCATO75600 419 aa10.63□□□□□ -0.71
TPM1-221ENST00000559831 ZMPSTE24O75844 475 aa10.63□□□□□ -0.71
TPM1-221ENST00000559831 HLA-DQB2P05538 268 aa10.63□□□□□ -0.71
TPM1-221ENST00000559831 RPL22P35268 128 aaKnown RBP10.63□□□□□ -0.71
TPM1-221ENST00000559831 ADCY8P40145 1251 aa10.63□□□□□ -0.71
TPM1-221ENST00000559831 OPRD1P41143 372 aa10.63□□□□□ -0.71
TPM1-221ENST00000559831 CTSOP43234 321 aaPredicted RBP10.63□□□□□ -0.71
TPM1-221ENST00000559831 MMP13P45452 471 aa10.63□□□□□ -0.71
TPM1-221ENST00000559831 PLK1P53350 603 aa10.63□□□□□ -0.71
TPM1-221ENST00000559831 IFI35P80217 286 aaPredicted RBP10.63□□□□□ -0.71
TPM1-221ENST00000559831 GUCY2DQ02846 1103 aa10.63□□□□□ -0.71
TPM1-221ENST00000559831 SLC10A7Q0GE19 358 aa10.63□□□□□ -0.71
TPM1-221ENST00000559831 DMC1Q14565 340 aa10.63□□□□□ -0.71
TPM1-221ENST00000559831 LBRQ14739 615 aaKnown RBP10.63□□□□□ -0.71
TPM1-221ENST00000559831 ERCC6LQ2NKX8 1250 aa10.63□□□□□ -0.71
TPM1-221ENST00000559831 P3H1Q32P28 736 aa10.63□□□□□ -0.71
TPM1-221ENST00000559831 TEX44Q53QW1 395 aa10.63□□□□□ -0.71
TPM1-221ENST00000559831 FAXCQ5TGI0 409 aa10.63□□□□□ -0.71
TPM1-221ENST00000559831 MARC1Q5VT66 337 aa10.63□□□□□ -0.71
TPM1-221ENST00000559831 PID1Q7Z2X4 250 aa10.63□□□□□ -0.71
TPM1-221ENST00000559831 ADHFE1Q8IWW8 467 aa10.63□□□□□ -0.71
TPM1-221ENST00000559831 ZNF567Q8N184 647 aa10.63□□□□□ -0.71
TPM1-221ENST00000559831 BBS5Q8N3I7 341 aa10.63□□□□□ -0.71
TPM1-221ENST00000559831 MAML1Q92585 1016 aa10.63□□□□□ -0.71
TPM1-221ENST00000559831 RTP4Q96DX8 246 aa10.63□□□□□ -0.71
TPM1-221ENST00000559831 CHFRQ96EP1 664 aa10.63□□□□□ -0.71
TPM1-221ENST00000559831 SPATA13Q96N96 652 aa10.63□□□□□ -0.71
TPM1-221ENST00000559831 ZNF599Q96NL3 588 aa10.63□□□□□ -0.71
TPM1-221ENST00000559831 PNKPQ96T60 521 aa10.63□□□□□ -0.71
TPM1-221ENST00000559831 CINPQ9BW66 212 aaPredicted RBP10.63□□□□□ -0.71
TPM1-221ENST00000559831 CIPCQ9C0C6 399 aa10.63□□□□□ -0.71
TPM1-221ENST00000559831 RAB17Q9H0T7 212 aa10.63□□□□□ -0.71
TPM1-221ENST00000559831 PDFQ9HBH1 243 aa10.63□□□□□ -0.71
TPM1-221ENST00000559831 PAK5Q9P286 719 aa10.63□□□□□ -0.71
TPM1-221ENST00000559831 RSPH14Q9UHP6 348 aa10.63□□□□□ -0.71
TPM1-221ENST00000559831 DMGDHQ9UI17 866 aaKnown RBP10.63□□□□□ -0.71
TPM1-221ENST00000559831 FBXO10Q9UK96 956 aa10.63□□□□□ -0.71
TPM1-221ENST00000559831 NEU2Q9Y3R4 380 aa10.63□□□□□ -0.71
TPM1-221ENST00000559831 C5orf42Q9H799 3197 aa10.63□□□□□ -0.71
TPM1-221ENST00000559831 ESYT3A0FGR9 886 aa10.62□□□□□ -0.71
TPM1-221ENST00000559831 SPECC1L-ADORA2AF8WAN1 911 aa10.62□□□□□ -0.71
TPM1-221ENST00000559831 ZBTB24O43167 697 aaPredicted RBP10.62□□□□□ -0.71
TPM1-221ENST00000559831 OPHN1O60890 802 aa10.62□□□□□ -0.71
TPM1-221ENST00000559831 TMCC1O94876 653 aa10.62□□□□□ -0.71
TPM1-221ENST00000559831 PEX11BO96011 259 aa10.62□□□□□ -0.71
TPM1-221ENST00000559831 MT-CO1P00395 513 aa10.62□□□□□ -0.71
TPM1-221ENST00000559831 APODP05090 189 aa10.62□□□□□ -0.71
TPM1-221ENST00000559831 NFKB1P19838 968 aa10.62□□□□□ -0.71
TPM1-221ENST00000559831 PSMB4P28070 264 aa10.62□□□□□ -0.71
TPM1-221ENST00000559831 STK19P49842 368 aaPredicted RBP10.62□□□□□ -0.71
TPM1-221ENST00000559831 RENBPP51606 427 aa10.62□□□□□ -0.71
TPM1-221ENST00000559831 GEMIN4P57678 1058 aaKnown RBP10.62□□□□□ -0.71
TPM1-221ENST00000559831 TUBB4BP68371 445 aa10.62□□□□□ -0.71
TPM1-221ENST00000559831 BASP1P80723 227 aaKnown RBP10.62□□□□□ -0.71
TPM1-221ENST00000559831 ZP2Q05996 745 aa10.62□□□□□ -0.71
TPM1-221ENST00000559831 SULT2A1Q06520 285 aa10.62□□□□□ -0.71
TPM1-221ENST00000559831 MESP2Q0VG99 397 aa10.62□□□□□ -0.71
TPM1-221ENST00000559831 TDGQ13569 410 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms