RNA–Protein interactions for RNA: ENST00000559728.1

HMG20A-209, Transcript of high mobility group 20A, humanhuman

TSL 2

Gene HMG20A, Length 981 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-209ENST00000559728 VPS28Q9UK41 221 aa9.25□□□□□ -0.93
HMG20A-209ENST00000559728 AMFRQ9UKV5 643 aa9.25□□□□□ -0.93
HMG20A-209ENST00000559728 ERVW-1Q9UQF0 538 aa9.25□□□□□ -0.93
HMG20A-209ENST00000559728 STON1Q9Y6Q2 735 aa9.25□□□□□ -0.93
HMG20A-209ENST00000559728 MUC22E2RYF6 1773 aaPredicted RBP9.24□□□□□ -0.93
HMG20A-209ENST00000559728 TTC34A8MYJ7 566 aa9.24□□□□□ -0.93
HMG20A-209ENST00000559728 MIF4GDA9UHW6 222 aaKnown RBP9.24□□□□□ -0.93
HMG20A-209ENST00000559728 ZSCAN12O43309 604 aa9.24□□□□□ -0.93
HMG20A-209ENST00000559728 KDELR3O43731 214 aa9.24□□□□□ -0.93
HMG20A-209ENST00000559728 ATP9BO43861 1147 aa9.24□□□□□ -0.93
HMG20A-209ENST00000559728 MAFKO60675 156 aa9.24□□□□□ -0.93
HMG20A-209ENST00000559728 ZRANB2O95218 330 aaKnown RBP eCLIP9.24□□□□□ -0.93
HMG20A-209ENST00000559728 PAPSS2O95340 614 aaPredicted RBP9.24□□□□□ -0.93
HMG20A-209ENST00000559728 MAP3K6O95382 1288 aa9.24□□□□□ -0.93
HMG20A-209ENST00000559728 KLF8O95600 359 aaPredicted RBP9.24□□□□□ -0.93
HMG20A-209ENST00000559728 ASLP04424 464 aa9.24□□□□□ -0.93
HMG20A-209ENST00000559728 SRCP12931 536 aa9.24□□□□□ -0.93
HMG20A-209ENST00000559728 HLA-EP13747 358 aa9.24□□□□□ -0.93
HMG20A-209ENST00000559728 VAV1P15498 845 aa9.24□□□□□ -0.93
HMG20A-209ENST00000559728 POLR2EP19388 210 aaKnown RBP9.24□□□□□ -0.93
HMG20A-209ENST00000559728 WASP42768 502 aa9.24□□□□□ -0.93
HMG20A-209ENST00000559728 OXCT1P55809 520 aa9.24□□□□□ -0.93
HMG20A-209ENST00000559728 RWDD2BP57060 319 aa9.24□□□□□ -0.93
HMG20A-209ENST00000559728 ECT2LQ008S8 904 aa9.24□□□□□ -0.93
HMG20A-209ENST00000559728 SATB1Q01826 763 aa9.24□□□□□ -0.93
HMG20A-209ENST00000559728 GALNT2Q10471 571 aa9.24□□□□□ -0.93
HMG20A-209ENST00000559728 KLF1Q13351 362 aaPredicted RBP9.24□□□□□ -0.93
HMG20A-209ENST00000559728 ZNF211Q13398 564 aaPredicted RBP9.24□□□□□ -0.93
HMG20A-209ENST00000559728 POLD3Q15054 466 aaPredicted RBP9.24□□□□□ -0.93
HMG20A-209ENST00000559728 PPP2R5EQ16537 467 aa9.24□□□□□ -0.93
HMG20A-209ENST00000559728 PARP15Q460N3 678 aa9.24□□□□□ -0.93
HMG20A-209ENST00000559728 PREPLQ4J6C6 727 aaPredicted RBP9.24□□□□□ -0.93
HMG20A-209ENST00000559728 TFDP3Q5H9I0 405 aa9.24□□□□□ -0.93
HMG20A-209ENST00000559728 NPNTQ6UXI9 565 aa9.24□□□□□ -0.93
HMG20A-209ENST00000559728 THSD4Q6ZMP0 1018 aa9.24□□□□□ -0.93
HMG20A-209ENST00000559728 LEKR1Q6ZMV7 388 aa9.24□□□□□ -0.93
HMG20A-209ENST00000559728 SYT13Q7L8C5 426 aa9.24□□□□□ -0.93
HMG20A-209ENST00000559728 MAP7D3Q8IWC1 876 aa9.24□□□□□ -0.93
HMG20A-209ENST00000559728 SLC35F6Q8N357 371 aa9.24□□□□□ -0.93
HMG20A-209ENST00000559728 SPEM1Q8N4L4 309 aa9.24□□□□□ -0.93
HMG20A-209ENST00000559728 ZNF366Q8N895 744 aa9.24□□□□□ -0.93
HMG20A-209ENST00000559728 KDM1BQ8NB78 822 aa9.24□□□□□ -0.93
HMG20A-209ENST00000559728 LRRN4Q8WUT4 740 aa9.24□□□□□ -0.93
HMG20A-209ENST00000559728 EXOC4Q96A65 974 aa9.24□□□□□ -0.93
HMG20A-209ENST00000559728 ACDQ96AP0 544 aa9.24□□□□□ -0.93
HMG20A-209ENST00000559728 NSMCE3Q96MG7 304 aa9.24□□□□□ -0.93
HMG20A-209ENST00000559728 OLFM3Q96PB7 478 aa9.24□□□□□ -0.93
HMG20A-209ENST00000559728 SPON2Q9BUD6 331 aa9.24□□□□□ -0.93
HMG20A-209ENST00000559728 MUC3BQ9H195 1237 aa9.24□□□□□ -0.93
HMG20A-209ENST00000559728 ATP13A1Q9HD20 1204 aa9.24□□□□□ -0.93
HMG20A-209ENST00000559728 PRMT8Q9NR22 394 aaPredicted RBP9.24□□□□□ -0.93
HMG20A-209ENST00000559728 SAE1Q9UBE0 346 aaPredicted RBP9.24□□□□□ -0.93
HMG20A-209ENST00000559728 MMP17Q9ULZ9 603 aa9.24□□□□□ -0.93
HMG20A-209ENST00000559728 HS3ST2Q9Y278 367 aa9.24□□□□□ -0.93
HMG20A-209ENST00000559728 RAD54BQ9Y620 910 aa9.24□□□□□ -0.93
HMG20A-209ENST00000559728 CXorf51AA0A1B0GTR3 108 aa9.23□□□□□ -0.93
HMG20A-209ENST00000559728 TCRBV7S2A1N4TA0A589 114 aa9.23□□□□□ -0.93
HMG20A-209ENST00000559728 CBX4O00257 560 aa9.23□□□□□ -0.93
HMG20A-209ENST00000559728 MUSKO15146 869 aa9.23□□□□□ -0.93
HMG20A-209ENST00000559728 NCAM2O15394 837 aa9.23□□□□□ -0.93
HMG20A-209ENST00000559728 DAPK3O43293 454 aa9.23□□□□□ -0.93
HMG20A-209ENST00000559728 PRAMEF11O60813 436 aa9.23□□□□□ -0.93
HMG20A-209ENST00000559728 ATP5BP06576 529 aaKnown RBP9.23□□□□□ -0.93
HMG20A-209ENST00000559728 SRPRAP08240 638 aaKnown RBP9.23□□□□□ -0.93
HMG20A-209ENST00000559728 PECAM1P16284 738 aaPredicted RBP9.23□□□□□ -0.93
HMG20A-209ENST00000559728 NTSR1P30989 418 aa9.23□□□□□ -0.93
HMG20A-209ENST00000559728 MAGEA9P43362 315 aa9.23□□□□□ -0.93
HMG20A-209ENST00000559728 COPAP53621 1224 aa9.23□□□□□ -0.93
HMG20A-209ENST00000559728 COPS2P61201 443 aa9.23□□□□□ -0.93
HMG20A-209ENST00000559728 SULT2A1Q06520 285 aa9.23□□□□□ -0.93
HMG20A-209ENST00000559728 DMWDQ09019 674 aa9.23□□□□□ -0.93
HMG20A-209ENST00000559728 CYTH1Q15438 398 aa9.23□□□□□ -0.93
HMG20A-209ENST00000559728 CRY1Q16526 586 aa9.23□□□□□ -0.93
HMG20A-209ENST00000559728 HNRNPA1L2Q32P51 320 aaKnown RBP9.23□□□□□ -0.93
HMG20A-209ENST00000559728 HSF5Q4G112 596 aaPredicted RBP9.23□□□□□ -0.93
HMG20A-209ENST00000559728 TMEM31Q5JXX7 168 aa9.23□□□□□ -0.93
HMG20A-209ENST00000559728 FAM182AQ5T1J6 154 aa9.23□□□□□ -0.93
HMG20A-209ENST00000559728 C9orf64Q5T6V5 341 aa9.23□□□□□ -0.93
HMG20A-209ENST00000559728 TMCO3Q6UWJ1 677 aa9.23□□□□□ -0.93
HMG20A-209ENST00000559728 BBS12Q6ZW61 710 aa9.23□□□□□ -0.93
HMG20A-209ENST00000559728 SH2D3CQ8N5H7 860 aa9.23□□□□□ -0.93
HMG20A-209ENST00000559728 LZTR1Q8N653 840 aa9.23□□□□□ -0.93
HMG20A-209ENST00000559728 DTWD2Q8NBA8 298 aa9.23□□□□□ -0.93
HMG20A-209ENST00000559728 TRIM58Q8NG06 486 aa9.23□□□□□ -0.93
HMG20A-209ENST00000559728 PTPRN2Q92932 1015 aa9.23□□□□□ -0.93
HMG20A-209ENST00000559728 RBM41Q96IZ5 413 aaKnown RBP9.23□□□□□ -0.93
HMG20A-209ENST00000559728 WDR24Q96S15 920 aa9.23□□□□□ -0.93
HMG20A-209ENST00000559728 C2orf49Q9BVC5 232 aaPredicted RBP9.23□□□□□ -0.93
HMG20A-209ENST00000559728 C1QTNF1Q9BXJ1 281 aa9.23□□□□□ -0.93
HMG20A-209ENST00000559728 OSBPL8Q9BZF1 889 aa9.23□□□□□ -0.93
HMG20A-209ENST00000559728 PRSS16Q9NQE7 514 aa9.23□□□□□ -0.93
HMG20A-209ENST00000559728 EFR3BQ9Y2G0 817 aa9.23□□□□□ -0.93
HMG20A-209ENST00000559728 ZDBF2Q9HCK1 2354 aa9.23□□□□□ -0.93
HMG20A-209ENST00000559728 ENC1O14682 589 aa9.22□□□□□ -0.93
HMG20A-209ENST00000559728 NPC1O15118 1278 aa9.22□□□□□ -0.93
HMG20A-209ENST00000559728 CST8O60676 142 aa9.22□□□□□ -0.93
HMG20A-209ENST00000559728 ATP1A1P05023 1023 aaKnown RBP9.22□□□□□ -0.93
HMG20A-209ENST00000559728 GARSP41250 739 aaKnown RBP9.22□□□□□ -0.93
HMG20A-209ENST00000559728 RGRP47804 291 aa9.22□□□□□ -0.93
HMG20A-209ENST00000559728 SERPINH1P50454 418 aaKnown RBP9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms