RNA–Protein interactions for RNA: ENST00000559192.5

USP3-210, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 5,499 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-210ENST00000559192 ANKRD6Q9Y2G4 727 aa7.22□□□□□ -1.25
USP3-210ENST00000559192 TRIM24O15164 1050 aa7.22□□□□□ -1.25
USP3-210ENST00000559192 GUCY1B2O75343 617 aa7.22□□□□□ -1.25
USP3-210ENST00000559192 RGS20O76081 388 aa7.22□□□□□ -1.25
USP3-210ENST00000559192 DLDP09622 509 aaKnown RBP7.22□□□□□ -1.25
USP3-210ENST00000559192 S100A1P23297 94 aa7.22□□□□□ -1.25
USP3-210ENST00000559192 ACAT1P24752 427 aaKnown RBP7.22□□□□□ -1.25
USP3-210ENST00000559192 BCAT1P54687 386 aa7.22□□□□□ -1.25
USP3-210ENST00000559192 NAB1Q13506 487 aa7.22□□□□□ -1.25
USP3-210ENST00000559192 OR8H2Q8N162 312 aa7.22□□□□□ -1.25
USP3-210ENST00000559192 AFG1LQ8WV93 481 aa7.22□□□□□ -1.25
USP3-210ENST00000559192 EDEM1Q92611 657 aa7.22□□□□□ -1.25
USP3-210ENST00000559192 ULK4Q96C45 1275 aa7.22□□□□□ -1.25
USP3-210ENST00000559192 RNF145Q96MT1 663 aa7.22□□□□□ -1.25
USP3-210ENST00000559192 CCDC28BQ9BUN5 200 aa7.22□□□□□ -1.25
USP3-210ENST00000559192 CYP3A43Q9HB55 503 aa7.22□□□□□ -1.25
USP3-210ENST00000559192 SCN3BQ9NY72 215 aa7.22□□□□□ -1.25
USP3-210ENST00000559192 EGFL7Q9UHF1 273 aa7.22□□□□□ -1.25
USP3-210ENST00000559192 RNF112Q9ULX5 631 aa7.22□□□□□ -1.25
USP3-210ENST00000559192 CARD8Q9Y2G2 431 aa7.22□□□□□ -1.25
USP3-210ENST00000559192 TNFRSF21O75509 655 aa7.22□□□□□ -1.25
USP3-210ENST00000559192 AMHP03971 560 aa7.22□□□□□ -1.25
USP3-210ENST00000559192 T-ENOLP0DO92 83 aa7.22□□□□□ -1.25
USP3-210ENST00000559192 GM2AP17900 193 aa7.22□□□□□ -1.25
USP3-210ENST00000559192 ARHGAP17Q68EM7 881 aa7.22□□□□□ -1.25
USP3-210ENST00000559192 DRICH1Q6PGQ1 229 aaPredicted RBP7.22□□□□□ -1.25
USP3-210ENST00000559192 ZCCHC7Q8N3Z6 543 aaKnown RBP7.22□□□□□ -1.25
USP3-210ENST00000559192 PLD5Q8N7P1 536 aa7.22□□□□□ -1.25
USP3-210ENST00000559192 SUN5Q8TC36 379 aa7.22□□□□□ -1.25
USP3-210ENST00000559192 B3GNT5Q9BYG0 378 aa7.22□□□□□ -1.25
USP3-210ENST00000559192 POLR1BQ9H9Y6 1135 aa7.22□□□□□ -1.25
USP3-210ENST00000559192 CLK4Q9HAZ1 481 aaKnown RBP7.22□□□□□ -1.25
USP3-210ENST00000559192 TIMMDC1Q9NPL8 285 aa7.22□□□□□ -1.25
USP3-210ENST00000559192 NDFIP2Q9NV92 336 aa7.22□□□□□ -1.25
USP3-210ENST00000559192 SNTG2Q9NY99 539 aa7.22□□□□□ -1.25
USP3-210ENST00000559192 PTTG2Q9NZH5 202 aa7.22□□□□□ -1.25
USP3-210ENST00000559192 SELENONQ9NZV5 590 aa7.22□□□□□ -1.25
USP3-210ENST00000559192 KLHL33A6NCF5 533 aa7.22□□□□□ -1.25
USP3-210ENST00000559192 KCNU1A8MYU2 1149 aa7.22□□□□□ -1.25
USP3-210ENST00000559192 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.22□□□□□ -1.25
USP3-210ENST00000559192 CDH2P19022 906 aaPredicted RBP7.22□□□□□ -1.25
USP3-210ENST00000559192 GRIK1P39086 918 aa7.22□□□□□ -1.25
USP3-210ENST00000559192 TRIM69Q86WT6 500 aa7.22□□□□□ -1.25
USP3-210ENST00000559192 FIG4Q92562 907 aa7.22□□□□□ -1.25
USP3-210ENST00000559192 P2RX7Q99572 595 aaKnown RBP7.22□□□□□ -1.25
USP3-210ENST00000559192 ACO2Q99798 780 aaKnown RBP7.22□□□□□ -1.25
USP3-210ENST00000559192 THUMPD3Q9BV44 507 aaKnown RBP7.22□□□□□ -1.25
USP3-210ENST00000559192 OSBPL11Q9BXB4 747 aa7.22□□□□□ -1.25
USP3-210ENST00000559192 ACE2Q9BYF1 805 aaPredicted RBP7.22□□□□□ -1.25
USP3-210ENST00000559192 SDCBP2Q9H190 292 aa7.22□□□□□ -1.25
USP3-210ENST00000559192 SPAG4Q9NPE6 437 aa7.22□□□□□ -1.25
USP3-210ENST00000559192 ZNF358Q9NW07 568 aa7.22□□□□□ -1.25
USP3-210ENST00000559192 TMEM216Q9P0N5 145 aa7.22□□□□□ -1.25
USP3-210ENST00000559192 HACL1Q9UJ83 578 aa7.22□□□□□ -1.25
USP3-210ENST00000559192 PRPF19Q9UMS4 504 aaKnown RBP7.22□□□□□ -1.25
USP3-210ENST00000559192 RAP2CQ9Y3L5 183 aa7.22□□□□□ -1.25
USP3-210ENST00000559192 ECM29Q5VYK3 1845 aa7.22□□□□□ -1.25
USP3-210ENST00000559192 HDAC3O15379 428 aa7.21□□□□□ -1.25
USP3-210ENST00000559192 HBP1O60381 514 aa7.21□□□□□ -1.25
USP3-210ENST00000559192 ATP6V1G1O75348 118 aa7.21□□□□□ -1.25
USP3-210ENST00000559192 CYP2C8P10632 490 aa7.21□□□□□ -1.25
USP3-210ENST00000559192 NAA20P61599 178 aa7.21□□□□□ -1.25
USP3-210ENST00000559192 IRF9Q00978 393 aa7.21□□□□□ -1.25
USP3-210ENST00000559192 GBE1Q04446 702 aa7.21□□□□□ -1.25
USP3-210ENST00000559192 ZNF235Q14590 738 aa7.21□□□□□ -1.25
USP3-210ENST00000559192 SAMD4BQ5PRF9 694 aaKnown RBP7.21□□□□□ -1.25
USP3-210ENST00000559192 ZPBP2Q6X784 338 aa7.21□□□□□ -1.25
USP3-210ENST00000559192 BNIPLQ7Z465 357 aa7.21□□□□□ -1.25
USP3-210ENST00000559192 ERO1BQ86YB8 467 aa7.21□□□□□ -1.25
USP3-210ENST00000559192 HERC6Q8IVU3 1022 aa7.21□□□□□ -1.25
USP3-210ENST00000559192 FBXO27Q8NI29 283 aa7.21□□□□□ -1.25
USP3-210ENST00000559192 BLOC1S5Q8TDH9 187 aa7.21□□□□□ -1.25
USP3-210ENST00000559192 ACMSDQ8TDX5 336 aa7.21□□□□□ -1.25
USP3-210ENST00000559192 C19orf60Q96EN9 201 aa7.21□□□□□ -1.25
USP3-210ENST00000559192 SLC10A4Q96EP9 437 aa7.21□□□□□ -1.25
USP3-210ENST00000559192 ABHD8Q96I13 439 aa7.21□□□□□ -1.25
USP3-210ENST00000559192 MID1IP1Q9NPA3 183 aa7.21□□□□□ -1.25
USP3-210ENST00000559192 ZNF180Q9UJW8 692 aa7.21□□□□□ -1.25
USP3-210ENST00000559192 DOLKQ9UPQ8 538 aa7.21□□□□□ -1.25
USP3-210ENST00000559192 ATP6AP2A0A1C7CYW4 349 aa7.21□□□□□ -1.25
USP3-210ENST00000559192 FAM149AA5PLN7 773 aa7.21□□□□□ -1.25
USP3-210ENST00000559192 PTGES3LE9PB15 166 aa7.21□□□□□ -1.25
USP3-210ENST00000559192 BNIP3LO60238 219 aa7.21□□□□□ -1.25
USP3-210ENST00000559192 ATP6AP2O75787 350 aa7.21□□□□□ -1.25
USP3-210ENST00000559192 ZNF286BP0CG31 522 aa7.21□□□□□ -1.25
USP3-210ENST00000559192 IVDP26440 423 aa7.21□□□□□ -1.25
USP3-210ENST00000559192 GRIA1P42261 906 aa7.21□□□□□ -1.25
USP3-210ENST00000559192 SLC18A1P54219 525 aa7.21□□□□□ -1.25
USP3-210ENST00000559192 BACE1P56817 501 aa7.21□□□□□ -1.25
USP3-210ENST00000559192 CDH17Q12864 832 aa7.21□□□□□ -1.25
USP3-210ENST00000559192 KLHL12Q53G59 568 aa7.21□□□□□ -1.25
USP3-210ENST00000559192 LDLRAP1Q5SW96 308 aa7.21□□□□□ -1.25
USP3-210ENST00000559192 ARMC4Q5T2S8 1044 aa7.21□□□□□ -1.25
USP3-210ENST00000559192 LIPMQ5VYY2 423 aa7.21□□□□□ -1.25
USP3-210ENST00000559192 SLC39A4Q6P5W5 647 aa7.21□□□□□ -1.25
USP3-210ENST00000559192 ADGRF2Q8IZF7 708 aa7.21□□□□□ -1.25
USP3-210ENST00000559192 DHRSXQ8N5I4 330 aa7.21□□□□□ -1.25
USP3-210ENST00000559192 SLC2A14Q8TDB8 520 aa7.21□□□□□ -1.25
USP3-210ENST00000559192 MTG1Q9BT17 334 aaPredicted RBP7.21□□□□□ -1.25
USP3-210ENST00000559192 ELP3Q9H9T3 547 aa7.21□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms