RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 ATP9BO43861 1147 aa11.12□□□□□ -0.63
TPM1-217ENST00000559108 MAFKO60675 156 aa11.12□□□□□ -0.63
TPM1-217ENST00000559108 PRAMEF11O60813 436 aa11.12□□□□□ -0.63
TPM1-217ENST00000559108 PAPSS2O95340 614 aaPredicted RBP11.12□□□□□ -0.63
TPM1-217ENST00000559108 ASLP04424 464 aa11.12□□□□□ -0.63
TPM1-217ENST00000559108 ATP1A1P05023 1023 aaKnown RBP11.12□□□□□ -0.63
TPM1-217ENST00000559108 SRPRAP08240 638 aaKnown RBP11.12□□□□□ -0.63
TPM1-217ENST00000559108 GKP32189 559 aa11.12□□□□□ -0.63
TPM1-217ENST00000559108 SERPINH1P50454 418 aaKnown RBP11.12□□□□□ -0.63
TPM1-217ENST00000559108 ZNF135P52742 658 aaPredicted RBP11.12□□□□□ -0.63
TPM1-217ENST00000559108 OXCT1P55809 520 aa11.12□□□□□ -0.63
TPM1-217ENST00000559108 YBEYP58557 167 aaPredicted RBP11.12□□□□□ -0.63
TPM1-217ENST00000559108 SLC10A7Q0GE19 358 aa11.12□□□□□ -0.63
TPM1-217ENST00000559108 GALNT2Q10471 571 aa11.12□□□□□ -0.63
TPM1-217ENST00000559108 TCF15Q12870 199 aa11.12□□□□□ -0.63
TPM1-217ENST00000559108 CYTH1Q15438 398 aa11.12□□□□□ -0.63
TPM1-217ENST00000559108 KCTD19Q17RG1 926 aaPredicted RBP11.12□□□□□ -0.63
TPM1-217ENST00000559108 HNRNPA1L2Q32P51 320 aaKnown RBP11.12□□□□□ -0.63
TPM1-217ENST00000559108 PARP15Q460N3 678 aa11.12□□□□□ -0.63
TPM1-217ENST00000559108 ZFYVE27Q5T4F4 411 aa11.12□□□□□ -0.63
TPM1-217ENST00000559108 C9orf64Q5T6V5 341 aa11.12□□□□□ -0.63
TPM1-217ENST00000559108 KAZNQ674X7 775 aa11.12□□□□□ -0.63
TPM1-217ENST00000559108 C22orf39Q6P5X5 142 aa11.12□□□□□ -0.63
TPM1-217ENST00000559108 SERPINA13PQ6UXR4 307 aa11.12□□□□□ -0.63
TPM1-217ENST00000559108 MAMSTRQ6ZN01 415 aa11.12□□□□□ -0.63
TPM1-217ENST00000559108 VSIG1Q86XK7 387 aa11.12□□□□□ -0.63
TPM1-217ENST00000559108 C1orf210Q8IVY1 113 aa11.12□□□□□ -0.63
TPM1-217ENST00000559108 PGBD5Q8N414 524 aa11.12□□□□□ -0.63
TPM1-217ENST00000559108 FRMD1Q8N878 549 aa11.12□□□□□ -0.63
TPM1-217ENST00000559108 ZNF557Q8N988 423 aaPredicted RBP11.12□□□□□ -0.63
TPM1-217ENST00000559108 CHST14Q8NCH0 376 aa11.12□□□□□ -0.63
TPM1-217ENST00000559108 MDGA1Q8NFP4 955 aa11.12□□□□□ -0.63
TPM1-217ENST00000559108 KCNV2Q8TDN2 545 aa11.12□□□□□ -0.63
TPM1-217ENST00000559108 NELL1Q92832 810 aa11.12□□□□□ -0.63
TPM1-217ENST00000559108 HAUS1Q96CS2 278 aa11.12□□□□□ -0.63
TPM1-217ENST00000559108 CALR3Q96L12 384 aaKnown RBP11.12□□□□□ -0.63
TPM1-217ENST00000559108 WDR24Q96S15 920 aa11.12□□□□□ -0.63
TPM1-217ENST00000559108 FAM129BQ96TA1 746 aa11.12□□□□□ -0.63
TPM1-217ENST00000559108 C2orf49Q9BVC5 232 aaPredicted RBP11.12□□□□□ -0.63
TPM1-217ENST00000559108 C10orf88Q9H8K7 445 aa11.12□□□□□ -0.63
TPM1-217ENST00000559108 R3HDM2Q9Y2K5 976 aaKnown RBP11.12□□□□□ -0.63
TPM1-217ENST00000559108 DOCK9Q9BZ29 2069 aa11.12□□□□□ -0.63
TPM1-217ENST00000559108 TCRBV21S2A2A0A5A6 115 aa11.11□□□□□ -0.63
TPM1-217ENST00000559108 TTC24A2A3L6 582 aaPredicted RBP11.11□□□□□ -0.63
TPM1-217ENST00000559108 APOL1O14791 398 aa11.11□□□□□ -0.63
TPM1-217ENST00000559108 GALR2O43603 387 aaPredicted RBP11.11□□□□□ -0.63
TPM1-217ENST00000559108 TIMM44O43615 452 aa11.11□□□□□ -0.63
TPM1-217ENST00000559108 NRDCO43847 1150 aa11.11□□□□□ -0.63
TPM1-217ENST00000559108 CST8O60676 142 aa11.11□□□□□ -0.63
TPM1-217ENST00000559108 TMCC1O94876 653 aa11.11□□□□□ -0.63
TPM1-217ENST00000559108 ZRANB2O95218 330 aaKnown RBP eCLIP11.11□□□□□ -0.63
TPM1-217ENST00000559108 ATP5BP06576 529 aaKnown RBP11.11□□□□□ -0.63
TPM1-217ENST00000559108 EPHX1P07099 455 aa11.11□□□□□ -0.63
TPM1-217ENST00000559108 CTSLP07711 333 aa11.11□□□□□ -0.63
TPM1-217ENST00000559108 C7P10643 843 aa11.11□□□□□ -0.63
TPM1-217ENST00000559108 NDUFV2P19404 249 aa11.11□□□□□ -0.63
TPM1-217ENST00000559108 PTPN7P35236 360 aa11.11□□□□□ -0.63
TPM1-217ENST00000559108 CXCL12P48061 93 aa11.11□□□□□ -0.63
TPM1-217ENST00000559108 VASPP50552 380 aaPredicted RBP11.11□□□□□ -0.63
TPM1-217ENST00000559108 NRLP54845 237 aa11.11□□□□□ -0.63
TPM1-217ENST00000559108 RWDD2BP57060 319 aa11.11□□□□□ -0.63
TPM1-217ENST00000559108 SRSF5Q13243 272 aaKnown RBP11.11□□□□□ -0.63
TPM1-217ENST00000559108 KLF1Q13351 362 aaPredicted RBP11.11□□□□□ -0.63
TPM1-217ENST00000559108 CAMK2GQ13555 558 aaPredicted RBP11.11□□□□□ -0.63
TPM1-217ENST00000559108 ANGPT1Q15389 498 aa11.11□□□□□ -0.63
TPM1-217ENST00000559108 DLG2Q15700 870 aa11.11□□□□□ -0.63
TPM1-217ENST00000559108 PPP2R5EQ16537 467 aa11.11□□□□□ -0.63
TPM1-217ENST00000559108 IFI16Q16666 785 aaKnown RBP11.11□□□□□ -0.63
TPM1-217ENST00000559108 TFDP3Q5H9I0 405 aa11.11□□□□□ -0.63
TPM1-217ENST00000559108 ZNF569Q5MCW4 686 aa11.11□□□□□ -0.63
TPM1-217ENST00000559108 EOGTQ5NDL2 527 aa11.11□□□□□ -0.63
TPM1-217ENST00000559108 ATXN7L2Q5T6C5 722 aaPredicted RBP11.11□□□□□ -0.63
TPM1-217ENST00000559108 ANO7Q6IWH7 933 aa11.11□□□□□ -0.63
TPM1-217ENST00000559108 BBS12Q6ZW61 710 aa11.11□□□□□ -0.63
TPM1-217ENST00000559108 RASSF3Q86WH2 238 aa11.11□□□□□ -0.63
TPM1-217ENST00000559108 RFX6Q8HWS3 928 aa11.11□□□□□ -0.63
TPM1-217ENST00000559108 CCDC50Q8IVM0 306 aa11.11□□□□□ -0.63
TPM1-217ENST00000559108 CCDC117Q8IWD4 279 aaPredicted RBP11.11□□□□□ -0.63
TPM1-217ENST00000559108 RCOR2Q8IZ40 523 aa11.11□□□□□ -0.63
TPM1-217ENST00000559108 SYCE1Q8N0S2 351 aa11.11□□□□□ -0.63
TPM1-217ENST00000559108 STK40Q8N2I9 435 aa11.11□□□□□ -0.63
TPM1-217ENST00000559108 TXLNBQ8N3L3 684 aa11.11□□□□□ -0.63
TPM1-217ENST00000559108 OR2A12Q8NGT7 310 aa11.11□□□□□ -0.63
TPM1-217ENST00000559108 OR6K2Q8NGY2 324 aa11.11□□□□□ -0.63
TPM1-217ENST00000559108 EXOC4Q96A65 974 aa11.11□□□□□ -0.63
TPM1-217ENST00000559108 ACDQ96AP0 544 aa11.11□□□□□ -0.63
TPM1-217ENST00000559108 EXOC2Q96KP1 924 aa11.11□□□□□ -0.63
TPM1-217ENST00000559108 MRGPRX1Q96LB2 322 aa11.11□□□□□ -0.63
TPM1-217ENST00000559108 LGMNQ99538 433 aa11.11□□□□□ -0.63
TPM1-217ENST00000559108 OSBPL8Q9BZF1 889 aa11.11□□□□□ -0.63
TPM1-217ENST00000559108 KCND1Q9NSA2 647 aa11.11□□□□□ -0.63
TPM1-217ENST00000559108 EBF1Q9UH73 591 aa11.11□□□□□ -0.63
TPM1-217ENST00000559108 IPO11Q9UI26 975 aaKnown RBP11.11□□□□□ -0.63
TPM1-217ENST00000559108 SARDHQ9UL12 918 aa11.11□□□□□ -0.63
TPM1-217ENST00000559108 HEY1Q9Y5J3 304 aa11.11□□□□□ -0.63
TPM1-217ENST00000559108 MUC6Q6W4X9 2439 aa11.11□□□□□ -0.63
TPM1-217ENST00000559108 LRRK1Q38SD2 2015 aa11.11□□□□□ -0.63
TPM1-217ENST00000559108 MIF4GDA9UHW6 222 aaKnown RBP11.1□□□□□ -0.63
TPM1-217ENST00000559108 PLK4O00444 970 aa11.1□□□□□ -0.63
TPM1-217ENST00000559108 INSIG1O15503 277 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms