RNA–Protein interactions for RNA: ENST00000558966.5

CTDSPL2-204, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-204ENST00000558966 MBD1Q9UIS9 605 aaPredicted RBP6.22□□□□□ -1.41
CTDSPL2-204ENST00000558966 INTS6Q9UL03 887 aaKnown RBP6.22□□□□□ -1.41
CTDSPL2-204ENST00000558966 TRIM33Q9UPN9 1127 aa6.22□□□□□ -1.41
CTDSPL2-204ENST00000558966 PI4KAP42356 2102 aa6.21□□□□□ -1.41
CTDSPL2-204ENST00000558966 DOCK4Q8N1I0 1966 aa6.21□□□□□ -1.42
CTDSPL2-204ENST00000558966 CEP192Q8TEP8 1941 aa6.21□□□□□ -1.42
CTDSPL2-204ENST00000558966 NYNRINQ9P2P1 1898 aaKnown RBP6.21□□□□□ -1.42
CTDSPL2-204ENST00000558966 A0A1W2PQC6 194 aa6.21□□□□□ -1.42
CTDSPL2-204ENST00000558966 TYW5A2RUC4 315 aaKnown RBP6.21□□□□□ -1.42
CTDSPL2-204ENST00000558966 F5H5T6 163 aa6.21□□□□□ -1.42
CTDSPL2-204ENST00000558966 NPC1O15118 1278 aa6.21□□□□□ -1.42
CTDSPL2-204ENST00000558966 LRP3O75074 770 aa6.21□□□□□ -1.42
CTDSPL2-204ENST00000558966 LUC7L3O95232 432 aaKnown RBP6.21□□□□□ -1.42
CTDSPL2-204ENST00000558966 GJB6O95452 261 aa6.21□□□□□ -1.42
CTDSPL2-204ENST00000558966 ADCY5O95622 1261 aa6.21□□□□□ -1.42
CTDSPL2-204ENST00000558966 SLC2A3P11169 496 aa6.21□□□□□ -1.42
CTDSPL2-204ENST00000558966 HLA-EP13747 358 aa6.21□□□□□ -1.42
CTDSPL2-204ENST00000558966 PTMSP20962 102 aa6.21□□□□□ -1.42
CTDSPL2-204ENST00000558966 ABCB4P21439 1286 aa6.21□□□□□ -1.42
CTDSPL2-204ENST00000558966 ADH6P28332 368 aa6.21□□□□□ -1.42
CTDSPL2-204ENST00000558966 CXCR3P49682 368 aa6.21□□□□□ -1.42
CTDSPL2-204ENST00000558966 SULT1E1P49888 294 aa6.21□□□□□ -1.42
CTDSPL2-204ENST00000558966 LIG3P49916 1009 aa6.21□□□□□ -1.42
CTDSPL2-204ENST00000558966 COPAP53621 1224 aa6.21□□□□□ -1.42
CTDSPL2-204ENST00000558966 CCDC6Q16204 474 aa6.21□□□□□ -1.42
CTDSPL2-204ENST00000558966 CLEC16AQ2KHT3 1053 aa6.21□□□□□ -1.42
CTDSPL2-204ENST00000558966 SLC25A52Q3SY17 297 aa6.21□□□□□ -1.42
CTDSPL2-204ENST00000558966 RAB6CQ53S08 254 aa6.21□□□□□ -1.42
CTDSPL2-204ENST00000558966 ARTNQ5T4W7 220 aa6.21□□□□□ -1.42
CTDSPL2-204ENST00000558966 MBLAC2Q68D91 279 aa6.21□□□□□ -1.42
CTDSPL2-204ENST00000558966 SDE2Q6IQ49 451 aa6.21□□□□□ -1.42
CTDSPL2-204ENST00000558966 FBXL22Q6P050 247 aa6.21□□□□□ -1.42
CTDSPL2-204ENST00000558966 ARCQ7LC44 396 aa6.21□□□□□ -1.42
CTDSPL2-204ENST00000558966 IRF2BP2Q7Z5L9 587 aa6.21□□□□□ -1.42
CTDSPL2-204ENST00000558966 PHLDB2Q86SQ0 1253 aa6.21□□□□□ -1.42
CTDSPL2-204ENST00000558966 C14orf80Q86SX3 495 aa6.21□□□□□ -1.42
CTDSPL2-204ENST00000558966 EMC1Q8N766 993 aa6.21□□□□□ -1.42
CTDSPL2-204ENST00000558966 ZNF366Q8N895 744 aa6.21□□□□□ -1.42
CTDSPL2-204ENST00000558966 MSANTD4Q8NCY6 345 aa6.21□□□□□ -1.42
CTDSPL2-204ENST00000558966 JOSD2Q8TAC2 188 aa6.21□□□□□ -1.42
CTDSPL2-204ENST00000558966 IGSF8Q969P0 613 aa6.21□□□□□ -1.42
CTDSPL2-204ENST00000558966 MRGPRX1Q96LB2 322 aa6.21□□□□□ -1.42
CTDSPL2-204ENST00000558966 CFAP57Q96MR6 1250 aa6.21□□□□□ -1.42
CTDSPL2-204ENST00000558966 CEP44Q9C0F1 390 aa6.21□□□□□ -1.42
CTDSPL2-204ENST00000558966 TTYH3Q9C0H2 523 aa6.21□□□□□ -1.42
CTDSPL2-204ENST00000558966 MKRN2Q9H000 416 aaKnown RBP6.21□□□□□ -1.42
CTDSPL2-204ENST00000558966 RAB6CQ9H0N0 254 aa6.21□□□□□ -1.42
CTDSPL2-204ENST00000558966 ARRDC1-AS1Q9H2J1 176 aa6.21□□□□□ -1.42
CTDSPL2-204ENST00000558966 TMEM245Q9H330 911 aa6.21□□□□□ -1.42
CTDSPL2-204ENST00000558966 SEMA4GQ9NTN9 838 aa6.21□□□□□ -1.42
CTDSPL2-204ENST00000558966 ARHGEF38Q9NXL2 777 aa6.21□□□□□ -1.42
CTDSPL2-204ENST00000558966 STAP1Q9ULZ2 295 aa6.21□□□□□ -1.42
CTDSPL2-204ENST00000558966 USP18Q9UMW8 372 aa6.21□□□□□ -1.42
CTDSPL2-204ENST00000558966 SNX10Q9Y5X0 201 aa6.21□□□□□ -1.42
CTDSPL2-204ENST00000558966 HS3ST4Q9Y661 456 aa6.21□□□□□ -1.42
CTDSPL2-204ENST00000558966 CACNA1EQ15878 2313 aa6.21□□□□□ -1.42
CTDSPL2-204ENST00000558966 IGHV1OR15-9A0A0B4J2B8 117 aa6.2□□□□□ -1.42
CTDSPL2-204ENST00000558966 A0A1B0GVM2 712 aa6.2□□□□□ -1.42
CTDSPL2-204ENST00000558966 TCRBV5S1A1TA0A578 114 aa6.2□□□□□ -1.42
CTDSPL2-204ENST00000558966 TCAF2A6NFQ2 919 aa6.2□□□□□ -1.42
CTDSPL2-204ENST00000558966 LRRC53A6NM62 1247 aa6.2□□□□□ -1.42
CTDSPL2-204ENST00000558966 TIMM44O43615 452 aa6.2□□□□□ -1.42
CTDSPL2-204ENST00000558966 EPHX1P07099 455 aa6.2□□□□□ -1.42
CTDSPL2-204ENST00000558966 DLDP09622 509 aaKnown RBP6.2□□□□□ -1.42
CTDSPL2-204ENST00000558966 ARAFP10398 606 aa6.2□□□□□ -1.42
CTDSPL2-204ENST00000558966 FERP16591 822 aa6.2□□□□□ -1.42
CTDSPL2-204ENST00000558966 EIF4A3P38919 411 aaKnown RBP6.2□□□□□ -1.42
CTDSPL2-204ENST00000558966 MPLP40238 635 aa6.2□□□□□ -1.42
CTDSPL2-204ENST00000558966 PBX1P40424 430 aa6.2□□□□□ -1.42
CTDSPL2-204ENST00000558966 CSKP41240 450 aa6.2□□□□□ -1.42
CTDSPL2-204ENST00000558966 NSFP46459 744 aaKnown RBP6.2□□□□□ -1.42
CTDSPL2-204ENST00000558966 GSCP56915 257 aaPredicted RBP6.2□□□□□ -1.42
CTDSPL2-204ENST00000558966 DEUP1Q05D60 604 aa6.2□□□□□ -1.42
CTDSPL2-204ENST00000558966 PWP1Q13610 501 aa6.2□□□□□ -1.42
CTDSPL2-204ENST00000558966 CDH18Q13634 790 aa6.2□□□□□ -1.42
CTDSPL2-204ENST00000558966 AUHQ13825 339 aaKnown RBP6.2□□□□□ -1.42
CTDSPL2-204ENST00000558966 STARD3Q14849 445 aa6.2□□□□□ -1.42
CTDSPL2-204ENST00000558966 NR1I3Q14994 352 aa6.2□□□□□ -1.42
CTDSPL2-204ENST00000558966 ELF2Q15723 593 aa6.2□□□□□ -1.42
CTDSPL2-204ENST00000558966 CSRP2Q16527 193 aa6.2□□□□□ -1.42
CTDSPL2-204ENST00000558966 PLEKHG6Q3KR16 790 aa6.2□□□□□ -1.42
CTDSPL2-204ENST00000558966 FILIP1LQ4L180 1135 aa6.2□□□□□ -1.42
CTDSPL2-204ENST00000558966 FNDC3BQ53EP0 1204 aaKnown RBP6.2□□□□□ -1.42
CTDSPL2-204ENST00000558966 PITRM1Q5JRX3 1037 aa6.2□□□□□ -1.42
CTDSPL2-204ENST00000558966 BRMS1LQ5PSV4 323 aa6.2□□□□□ -1.42
CTDSPL2-204ENST00000558966 CXorf57Q6NSI4 855 aaKnown RBP6.2□□□□□ -1.42
CTDSPL2-204ENST00000558966 SERPINA13PQ6UXR4 307 aa6.2□□□□□ -1.42
CTDSPL2-204ENST00000558966 MON1BQ7L1V2 547 aa6.2□□□□□ -1.42
CTDSPL2-204ENST00000558966 PHF13Q86YI8 300 aaPredicted RBP6.2□□□□□ -1.42
CTDSPL2-204ENST00000558966 ZNF683Q8IZ20 524 aa6.2□□□□□ -1.42
CTDSPL2-204ENST00000558966 CCAR2Q8N163 923 aaKnown RBP6.2□□□□□ -1.42
CTDSPL2-204ENST00000558966 ZNF557Q8N988 423 aaPredicted RBP6.2□□□□□ -1.42
CTDSPL2-204ENST00000558966 PHC3Q8NDX5 983 aa6.2□□□□□ -1.42
CTDSPL2-204ENST00000558966 OR52K2Q8NGK3 314 aa6.2□□□□□ -1.42
CTDSPL2-204ENST00000558966 TTC17Q96AE7 1141 aa6.2□□□□□ -1.42
CTDSPL2-204ENST00000558966 RMDN1Q96DB5 314 aa6.2□□□□□ -1.42
CTDSPL2-204ENST00000558966 MRGPRX3Q96LB0 322 aa6.2□□□□□ -1.42
CTDSPL2-204ENST00000558966 AGPAT1Q99943 283 aa6.2□□□□□ -1.42
CTDSPL2-204ENST00000558966 TKTL2Q9H0I9 626 aa6.2□□□□□ -1.42
CTDSPL2-204ENST00000558966 SMOC1Q9H4F8 434 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms