RNA–Protein interactions for RNA: ENST00000558474.1

VPS18-202, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS18, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-202ENST00000558474 WFDC5Q8TCV5 224 aa15.18■□□□□ 0.02
VPS18-202ENST00000558474 PPM1EQ8WY54 764 aa15.18■□□□□ 0.02
VPS18-202ENST00000558474 TRIM51Q9BSJ1 452 aa15.18■□□□□ 0.02
VPS18-202ENST00000558474 SPON2Q9BUD6 331 aa15.18■□□□□ 0.02
VPS18-202ENST00000558474 EPB41L5Q9HCM4 733 aa15.18■□□□□ 0.02
VPS18-202ENST00000558474 PLK2Q9NYY3 685 aa15.18■□□□□ 0.02
VPS18-202ENST00000558474 GGA2Q9UJY4 613 aa15.18■□□□□ 0.02
VPS18-202ENST00000558474 RAB21Q9UL25 225 aa15.18■□□□□ 0.02
VPS18-202ENST00000558474 J3KR12 359 aa15.17■□□□□ 0.02
VPS18-202ENST00000558474 KCNK1O00180 336 aa15.17■□□□□ 0.02
VPS18-202ENST00000558474 ARNTLO00327 626 aa15.17■□□□□ 0.02
VPS18-202ENST00000558474 DNALI1O14645 258 aaPredicted RBP15.17■□□□□ 0.02
VPS18-202ENST00000558474 ZMPSTE24O75844 475 aa15.17■□□□□ 0.02
VPS18-202ENST00000558474 PABPC1P11940 636 aaKnown RBP15.17■□□□□ 0.02
VPS18-202ENST00000558474 ARSAP15289 507 aa15.17■□□□□ 0.02
VPS18-202ENST00000558474 CES1P23141 567 aa15.17■□□□□ 0.02
VPS18-202ENST00000558474 IVDP26440 423 aa15.17■□□□□ 0.02
VPS18-202ENST00000558474 MZF1P28698 734 aaPredicted RBP15.17■□□□□ 0.02
VPS18-202ENST00000558474 HLA-FP30511 346 aa15.17■□□□□ 0.02
VPS18-202ENST00000558474 DGKGP49619 791 aa15.17■□□□□ 0.02
VPS18-202ENST00000558474 SLC7A5Q01650 507 aa15.17■□□□□ 0.02
VPS18-202ENST00000558474 GPS1Q13098 491 aa15.17■□□□□ 0.02
VPS18-202ENST00000558474 CALCOCO2Q13137 446 aa15.17■□□□□ 0.02
VPS18-202ENST00000558474 E2F5Q15329 346 aa15.17■□□□□ 0.02
VPS18-202ENST00000558474 ITPRIPL2Q3MIP1 535 aa15.17■□□□□ 0.02
VPS18-202ENST00000558474 PITRM1Q5JRX3 1037 aa15.17■□□□□ 0.02
VPS18-202ENST00000558474 PTCRAQ6ISU1 281 aaPredicted RBP15.17■□□□□ 0.02
VPS18-202ENST00000558474 PID1Q7Z2X4 250 aa15.17■□□□□ 0.02
VPS18-202ENST00000558474 HOOK3Q86VS8 718 aa15.17■□□□□ 0.02
VPS18-202ENST00000558474 SUGP1Q8IWZ8 645 aaKnown RBP15.17■□□□□ 0.02
VPS18-202ENST00000558474 ZNF567Q8N184 647 aa15.17■□□□□ 0.02
VPS18-202ENST00000558474 CCDC33Q8N5R6 958 aa15.17■□□□□ 0.02
VPS18-202ENST00000558474 NETO2Q8NC67 525 aa15.17■□□□□ 0.02
VPS18-202ENST00000558474 EXOC4Q96A65 974 aa15.17■□□□□ 0.02
VPS18-202ENST00000558474 C10orf88Q9H8K7 445 aa15.17■□□□□ 0.02
VPS18-202ENST00000558474 ABCB8Q9NUT2 735 aa15.17■□□□□ 0.02
VPS18-202ENST00000558474 SEPT10Q9P0V9 454 aa15.17■□□□□ 0.02
VPS18-202ENST00000558474 KLHL8Q9P2G9 620 aaPredicted RBP15.17■□□□□ 0.02
VPS18-202ENST00000558474 UBA2Q9UBT2 640 aaPredicted RBP15.17■□□□□ 0.02
VPS18-202ENST00000558474 TPX2Q9ULW0 747 aaKnown RBP15.17■□□□□ 0.02
VPS18-202ENST00000558474 CLEC4EQ9ULY5 219 aa15.17■□□□□ 0.02
VPS18-202ENST00000558474 ATP8A1Q9Y2Q0 1164 aa15.17■□□□□ 0.02
VPS18-202ENST00000558474 MYOFQ9NZM1 2061 aa15.16■□□□□ 0.02
VPS18-202ENST00000558474 GOLGA6CA6NDK9 693 aa15.16■□□□□ 0.02
VPS18-202ENST00000558474 GOLGA6BA6NDN3 693 aa15.16■□□□□ 0.02
VPS18-202ENST00000558474 ERI2A8K979 691 aaKnown RBP15.16■□□□□ 0.02
VPS18-202ENST00000558474 CBX4O00257 560 aa15.16■□□□□ 0.02
VPS18-202ENST00000558474 PSMD3O43242 534 aa15.16■□□□□ 0.02
VPS18-202ENST00000558474 TIMM44O43615 452 aa15.16■□□□□ 0.02
VPS18-202ENST00000558474 NEBLO76041 1014 aa15.16■□□□□ 0.02
VPS18-202ENST00000558474 SEC31AO94979 1220 aaKnown RBP15.16■□□□□ 0.02
VPS18-202ENST00000558474 JCHAINP01591 159 aa15.16■□□□□ 0.02
VPS18-202ENST00000558474 ASLP04424 464 aa15.16■□□□□ 0.02
VPS18-202ENST00000558474 CISD3P0C7P0 127 aa15.16■□□□□ 0.02
VPS18-202ENST00000558474 GOLGA6DP0CG33 693 aa15.16■□□□□ 0.02
VPS18-202ENST00000558474 CD70P32970 193 aa15.16■□□□□ 0.02
VPS18-202ENST00000558474 MAGEA6P43360 314 aa15.16■□□□□ 0.02
VPS18-202ENST00000558474 MMP13P45452 471 aa15.16■□□□□ 0.02
VPS18-202ENST00000558474 CDK16Q00536 496 aa15.16■□□□□ 0.02
VPS18-202ENST00000558474 ZBTB17Q13105 803 aa15.16■□□□□ 0.02
VPS18-202ENST00000558474 GRM2Q14416 872 aa15.16■□□□□ 0.02
VPS18-202ENST00000558474 LBRQ14739 615 aaKnown RBP15.16■□□□□ 0.02
VPS18-202ENST00000558474 EIF4HQ15056 248 aaKnown RBP15.16■□□□□ 0.02
VPS18-202ENST00000558474 AAK1Q2M2I8 961 aa15.16■□□□□ 0.02
VPS18-202ENST00000558474 GAB4Q2WGN9 574 aa15.16■□□□□ 0.02
VPS18-202ENST00000558474 RALGPS1Q5JS13 557 aa15.16■□□□□ 0.02
VPS18-202ENST00000558474 NUDT18Q6ZVK8 323 aa15.16■□□□□ 0.02
VPS18-202ENST00000558474 KLHDC8BQ8IXV7 354 aa15.16■□□□□ 0.02
VPS18-202ENST00000558474 GLIS1Q8NBF1 620 aa15.16■□□□□ 0.02
VPS18-202ENST00000558474 CCDC110Q8TBZ0 833 aa15.16■□□□□ 0.02
VPS18-202ENST00000558474 CSGALNACT1Q8TDX6 532 aa15.16■□□□□ 0.02
VPS18-202ENST00000558474 DNASE1L2Q92874 299 aa15.16■□□□□ 0.02
VPS18-202ENST00000558474 BHMTQ93088 406 aa15.16■□□□□ 0.02
VPS18-202ENST00000558474 TTC17Q96AE7 1141 aa15.16■□□□□ 0.02
VPS18-202ENST00000558474 ZFYVE19Q96K21 471 aa15.16■□□□□ 0.02
VPS18-202ENST00000558474 PSKH2Q96QS6 385 aa15.16■□□□□ 0.02
VPS18-202ENST00000558474 FRMD8Q9BZ67 464 aaPredicted RBP15.16■□□□□ 0.02
VPS18-202ENST00000558474 FOXP3Q9BZS1 431 aa15.16■□□□□ 0.02
VPS18-202ENST00000558474 TSPYL1Q9H0U9 437 aa15.16■□□□□ 0.02
VPS18-202ENST00000558474 GBA3Q9H227 469 aa15.16■□□□□ 0.02
VPS18-202ENST00000558474 BRD9Q9H8M2 597 aa15.16■□□□□ 0.02
VPS18-202ENST00000558474 DNAJC17Q9NVM6 304 aaKnown RBP15.16■□□□□ 0.02
VPS18-202ENST00000558474 RBM22Q9NW64 420 aaKnown RBP eCLIP15.16■□□□□ 0.02
VPS18-202ENST00000558474 GOLGA6AQ9NYA3 693 aa15.16■□□□□ 0.02
VPS18-202ENST00000558474 DEC1Q9P2X7 70 aa15.16■□□□□ 0.02
VPS18-202ENST00000558474 PRKAG3Q9UGI9 489 aa15.16■□□□□ 0.02
VPS18-202ENST00000558474 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.16■□□□□ 0.02
VPS18-202ENST00000558474 SEPT3Q9UH03 358 aa15.16■□□□□ 0.02
VPS18-202ENST00000558474 VPS51Q9UID3 782 aa15.16■□□□□ 0.02
VPS18-202ENST00000558474 V9GYY5 206 aaPredicted RBP15.16■□□□□ 0.02
VPS18-202ENST00000558474 COL4A3Q01955 1670 aa15.16■□□□□ 0.02
VPS18-202ENST00000558474 TULP3O75386 442 aa15.15■□□□□ 0.02
VPS18-202ENST00000558474 ZSCAN5DPP0CG00 497 aa15.15■□□□□ 0.02
VPS18-202ENST00000558474 ETS1P14921 441 aa15.15■□□□□ 0.02
VPS18-202ENST00000558474 GLULP15104 373 aa15.15■□□□□ 0.02
VPS18-202ENST00000558474 GJA4P35212 333 aa15.15■□□□□ 0.02
VPS18-202ENST00000558474 RPL21P46778 160 aaKnown RBP15.15■□□□□ 0.02
VPS18-202ENST00000558474 MRPS25P82663 173 aaKnown RBP15.15■□□□□ 0.02
VPS18-202ENST00000558474 ARF5P84085 180 aa15.15■□□□□ 0.02
VPS18-202ENST00000558474 NSUN2Q08J23 767 aaKnown RBP eCLIP15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms