RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 SERAC1Q96JX3 654 aa12.2□□□□□ -0.46
HERC1-202ENST00000558324 CCDC114Q96M63 670 aa12.2□□□□□ -0.46
HERC1-202ENST00000558324 MCEEQ96PE7 176 aa12.2□□□□□ -0.46
HERC1-202ENST00000558324 MAGEB5Q9BZ81 275 aa12.2□□□□□ -0.46
HERC1-202ENST00000558324 TMEM51Q9NW97 253 aa12.2□□□□□ -0.46
HERC1-202ENST00000558324 ZNF212Q9UDV6 495 aa12.2□□□□□ -0.46
HERC1-202ENST00000558324 OR12D3Q9UGF7 316 aa12.2□□□□□ -0.46
HERC1-202ENST00000558324 PCOLCE2Q9UKZ9 415 aa12.2□□□□□ -0.46
HERC1-202ENST00000558324 PPM1HQ9ULR3 514 aa12.2□□□□□ -0.46
HERC1-202ENST00000558324 BTBD3Q9Y2F9 522 aa12.2□□□□□ -0.46
HERC1-202ENST00000558324 FARP1Q9Y4F1 1045 aaPredicted RBP12.2□□□□□ -0.46
HERC1-202ENST00000558324 ACTL7AQ9Y615 435 aa12.2□□□□□ -0.46
HERC1-202ENST00000558324 PLXNA2O75051 1894 aa12.2□□□□□ -0.46
HERC1-202ENST00000558324 ILVBLA1L0T0 632 aa12.19□□□□□ -0.46
HERC1-202ENST00000558324 TMCO5BA8MYB1 307 aa12.19□□□□□ -0.46
HERC1-202ENST00000558324 FAM72CH0Y354 149 aa12.19□□□□□ -0.46
HERC1-202ENST00000558324 VILLO15195 856 aa12.19□□□□□ -0.46
HERC1-202ENST00000558324 ALOX15BO15296 676 aa12.19□□□□□ -0.46
HERC1-202ENST00000558324 FLRT2O43155 660 aa12.19□□□□□ -0.46
HERC1-202ENST00000558324 PLRG1O43660 514 aaKnown RBP12.19□□□□□ -0.46
HERC1-202ENST00000558324 WNT1P04628 370 aa12.19□□□□□ -0.46
HERC1-202ENST00000558324 CTSLP07711 333 aa12.19□□□□□ -0.46
HERC1-202ENST00000558324 FTH1P19P0C7X4 201 aa12.19□□□□□ -0.46
HERC1-202ENST00000558324 FERP16591 822 aa12.19□□□□□ -0.46
HERC1-202ENST00000558324 CD38P28907 300 aa12.19□□□□□ -0.46
HERC1-202ENST00000558324 CHRNA3P32297 505 aa12.19□□□□□ -0.46
HERC1-202ENST00000558324 ACVRL1P37023 503 aa12.19□□□□□ -0.46
HERC1-202ENST00000558324 CTSKP43235 329 aa12.19□□□□□ -0.46
HERC1-202ENST00000558324 PTPN9P43378 593 aa12.19□□□□□ -0.46
HERC1-202ENST00000558324 RECQLP46063 649 aaPredicted RBP12.19□□□□□ -0.46
HERC1-202ENST00000558324 CCT8P50990 548 aa12.19□□□□□ -0.46
HERC1-202ENST00000558324 DNA2P51530 1060 aa12.19□□□□□ -0.46
HERC1-202ENST00000558324 CCR5P51681 352 aa12.19□□□□□ -0.46
HERC1-202ENST00000558324 GNA12Q03113 381 aa12.19□□□□□ -0.46
HERC1-202ENST00000558324 FAM72AQ5TYM5 149 aa12.19□□□□□ -0.46
HERC1-202ENST00000558324 FAM72DQ6L9T8 149 aa12.19□□□□□ -0.46
HERC1-202ENST00000558324 DNAJC24Q6P3W2 148 aa12.19□□□□□ -0.46
HERC1-202ENST00000558324 WDR59Q6PJI9 974 aa12.19□□□□□ -0.46
HERC1-202ENST00000558324 UNQ6494/PRO21346Q6UXR6 183 aa12.19□□□□□ -0.46
HERC1-202ENST00000558324 MON1BQ7L1V2 547 aa12.19□□□□□ -0.46
HERC1-202ENST00000558324 STRADAQ7RTN6 431 aa12.19□□□□□ -0.46
HERC1-202ENST00000558324 FAM72BQ86X60 149 aa12.19□□□□□ -0.46
HERC1-202ENST00000558324 C3orf20Q8ND61 904 aa12.19□□□□□ -0.46
HERC1-202ENST00000558324 OR2A12Q8NGT7 310 aa12.19□□□□□ -0.46
HERC1-202ENST00000558324 MYOCQ99972 504 aa12.19□□□□□ -0.46
HERC1-202ENST00000558324 NDFIP2Q9NV92 336 aa12.19□□□□□ -0.46
HERC1-202ENST00000558324 PPARGC1AQ9UBK2 798 aaKnown RBP12.19□□□□□ -0.46
HERC1-202ENST00000558324 DNAI1Q9UI46 699 aa12.19□□□□□ -0.46
HERC1-202ENST00000558324 ANKRD62A6NC57 917 aa12.18□□□□□ -0.46
HERC1-202ENST00000558324 RNF103O00237 685 aa12.18□□□□□ -0.46
HERC1-202ENST00000558324 SLC7A4O43246 635 aa12.18□□□□□ -0.46
HERC1-202ENST00000558324 CCP110O43303 1012 aa12.18□□□□□ -0.46
HERC1-202ENST00000558324 CBFA2T3O75081 653 aa12.18□□□□□ -0.46
HERC1-202ENST00000558324 KRT37O76014 449 aa12.18□□□□□ -0.46
HERC1-202ENST00000558324 LRIG2O94898 1065 aa12.18□□□□□ -0.46
HERC1-202ENST00000558324 SERPINH1P50454 418 aaKnown RBP12.18□□□□□ -0.46
HERC1-202ENST00000558324 CLCN6P51797 869 aa12.18□□□□□ -0.46
HERC1-202ENST00000558324 ARF5P84085 180 aa12.18□□□□□ -0.46
HERC1-202ENST00000558324 C1QBPQ07021 282 aaKnown RBP12.18□□□□□ -0.46
HERC1-202ENST00000558324 SUZ12Q15022 739 aaKnown RBP12.18□□□□□ -0.46
HERC1-202ENST00000558324 ZNF423Q2M1K9 1284 aa12.18□□□□□ -0.46
HERC1-202ENST00000558324 CCDC157Q569K6 752 aa12.18□□□□□ -0.46
HERC1-202ENST00000558324 ARSIQ5FYB1 569 aa12.18□□□□□ -0.46
HERC1-202ENST00000558324 MANEALQ5VSG8 457 aa12.18□□□□□ -0.46
HERC1-202ENST00000558324 NAPEPLDQ6IQ20 393 aa12.18□□□□□ -0.46
HERC1-202ENST00000558324 RETSATQ6NUM9 610 aa12.18□□□□□ -0.46
HERC1-202ENST00000558324 SCYL2Q6P3W7 929 aa12.18□□□□□ -0.46
HERC1-202ENST00000558324 LEKR1Q6ZMV7 388 aa12.18□□□□□ -0.46
HERC1-202ENST00000558324 PRPF39Q86UA1 669 aaKnown RBP12.18□□□□□ -0.46
HERC1-202ENST00000558324 GATAD2AQ86YP4 633 aa12.18□□□□□ -0.46
HERC1-202ENST00000558324 PYROXD2Q8N2H3 581 aa12.18□□□□□ -0.46
HERC1-202ENST00000558324 KLK6Q92876 244 aa12.18□□□□□ -0.46
HERC1-202ENST00000558324 ARRDC3Q96B67 414 aa12.18□□□□□ -0.46
HERC1-202ENST00000558324 SKA1Q96BD8 255 aa12.18□□□□□ -0.46
HERC1-202ENST00000558324 TBC1D31Q96DN5 1066 aa12.18□□□□□ -0.46
HERC1-202ENST00000558324 BPIFA3Q9BQP9 254 aa12.18□□□□□ -0.46
HERC1-202ENST00000558324 TM6SF2Q9BZW4 377 aa12.18□□□□□ -0.46
HERC1-202ENST00000558324 DYRK4Q9NR20 520 aa12.18□□□□□ -0.46
HERC1-202ENST00000558324 IL36AQ9UHA7 158 aa12.18□□□□□ -0.46
HERC1-202ENST00000558324 CA5BQ9Y2D0 317 aa12.18□□□□□ -0.46
HERC1-202ENST00000558324 FCF1Q9Y324 198 aaKnown RBP12.18□□□□□ -0.46
HERC1-202ENST00000558324 PCDHGB2Q9Y5G2 931 aa12.18□□□□□ -0.46
HERC1-202ENST00000558324 TMEM131Q92545 1883 aa12.17□□□□□ -0.46
HERC1-202ENST00000558324 A0A1W2PR77 199 aa12.17□□□□□ -0.46
HERC1-202ENST00000558324 LRRC53A6NM62 1247 aa12.17□□□□□ -0.46
HERC1-202ENST00000558324 SIGLEC16A6NMB1 481 aa12.17□□□□□ -0.46
HERC1-202ENST00000558324 SMTNL1A8MU46 457 aa12.17□□□□□ -0.46
HERC1-202ENST00000558324 ATMINO43313 823 aaPredicted RBP12.17□□□□□ -0.46
HERC1-202ENST00000558324 LATO43561 262 aa12.17□□□□□ -0.46
HERC1-202ENST00000558324 RNGTTO60942 597 aaKnown RBP12.17□□□□□ -0.46
HERC1-202ENST00000558324 ZMPSTE24O75844 475 aa12.17□□□□□ -0.46
HERC1-202ENST00000558324 TRIM16O95361 564 aa12.17□□□□□ -0.46
HERC1-202ENST00000558324 PRNPP04156 253 aa12.17□□□□□ -0.46
HERC1-202ENST00000558324 PROS1P07225 676 aa12.17□□□□□ -0.46
HERC1-202ENST00000558324 PLEKP08567 350 aaPredicted RBP12.17□□□□□ -0.46
HERC1-202ENST00000558324 ATXN1LP0C7T5 689 aaKnown RBP12.17□□□□□ -0.46
HERC1-202ENST00000558324 CCDC172P0C7W6 258 aa12.17□□□□□ -0.46
HERC1-202ENST00000558324 PRLRP16471 622 aa12.17□□□□□ -0.46
HERC1-202ENST00000558324 RHOQP17081 205 aa12.17□□□□□ -0.46
HERC1-202ENST00000558324 TNFAIP3P21580 790 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms