RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 TMEM125Q96AQ2 219 aa3.98□□□□□ -1.77
TDP1-217ENST00000557782 LCORQ96JN0 433 aaPredicted RBP3.98□□□□□ -1.77
TDP1-217ENST00000557782 CABS1Q96KC9 395 aa3.98□□□□□ -1.77
TDP1-217ENST00000557782 NAA11Q9BSU3 229 aaPredicted RBP3.98□□□□□ -1.77
TDP1-217ENST00000557782 H2AFJQ9BTM1 129 aa3.98□□□□□ -1.77
TDP1-217ENST00000557782 FSD1Q9BTV5 496 aa3.98□□□□□ -1.77
TDP1-217ENST00000557782 KIFC3Q9BVG8 833 aa3.98□□□□□ -1.77
TDP1-217ENST00000557782 ELOVL1Q9BW60 279 aa3.98□□□□□ -1.77
TDP1-217ENST00000557782 CCDC106Q9BWC9 280 aa3.98□□□□□ -1.77
TDP1-217ENST00000557782 FUT8Q9BYC5 575 aa3.98□□□□□ -1.77
TDP1-217ENST00000557782 ACTRT3Q9BYD9 372 aa3.98□□□□□ -1.77
TDP1-217ENST00000557782 TPSD1Q9BZJ3 242 aa3.98□□□□□ -1.77
TDP1-217ENST00000557782 EPB41L4BQ9H329 900 aa3.98□□□□□ -1.77
TDP1-217ENST00000557782 MMADHCQ9H3L0 296 aaPredicted RBP3.98□□□□□ -1.77
TDP1-217ENST00000557782 AGO3Q9H9G7 860 aaKnown RBP3.98□□□□□ -1.77
TDP1-217ENST00000557782 SNX15Q9NRS6 342 aa3.98□□□□□ -1.77
TDP1-217ENST00000557782 BABAM1Q9NWV8 329 aa3.98□□□□□ -1.77
TDP1-217ENST00000557782 PSD3Q9NYI0 1048 aa3.98□□□□□ -1.77
TDP1-217ENST00000557782 OGFRQ9NZT2 677 aa3.98□□□□□ -1.77
TDP1-217ENST00000557782 KIAA1456Q9P272 454 aa3.98□□□□□ -1.77
TDP1-217ENST00000557782 UBA2Q9UBT2 640 aaPredicted RBP3.98□□□□□ -1.77
TDP1-217ENST00000557782 HAO1Q9UJM8 370 aa3.98□□□□□ -1.77
TDP1-217ENST00000557782 OAZ3Q9UMX2 235 aa3.98□□□□□ -1.77
TDP1-217ENST00000557782 A4GNTQ9UNA3 340 aa3.98□□□□□ -1.77
TDP1-217ENST00000557782 MTF2Q9Y483 593 aaPredicted RBP3.98□□□□□ -1.77
TDP1-217ENST00000557782 ZNF644Q9H582 1327 aaPredicted RBP3.97□□□□□ -1.77
TDP1-217ENST00000557782 FAM181BA6NEQ2 426 aa3.97□□□□□ -1.77
TDP1-217ENST00000557782 CCDC69A6NI79 296 aa3.97□□□□□ -1.77
TDP1-217ENST00000557782 A6NL46 340 aa3.97□□□□□ -1.77
TDP1-217ENST00000557782 MATN2O00339 956 aa3.97□□□□□ -1.77
TDP1-217ENST00000557782 PSMD14O00487 310 aa3.97□□□□□ -1.77
TDP1-217ENST00000557782 CHL1O00533 1208 aa3.97□□□□□ -1.77
TDP1-217ENST00000557782 PPM1DO15297 605 aa3.97□□□□□ -1.77
TDP1-217ENST00000557782 PRPF4O43172 522 aaKnown RBP eCLIP3.97□□□□□ -1.77
TDP1-217ENST00000557782 CA12O43570 354 aa3.97□□□□□ -1.77
TDP1-217ENST00000557782 STRNO43815 780 aa3.97□□□□□ -1.77
TDP1-217ENST00000557782 TMPRSS11DO60235 418 aa3.97□□□□□ -1.77
TDP1-217ENST00000557782 RECQL5O94762 991 aaPredicted RBP3.97□□□□□ -1.77
TDP1-217ENST00000557782 FTCDO95954 541 aa3.97□□□□□ -1.77
TDP1-217ENST00000557782 TUBBP07437 444 aa3.97□□□□□ -1.77
TDP1-217ENST00000557782 SRPRAP08240 638 aaKnown RBP3.97□□□□□ -1.77
TDP1-217ENST00000557782 CREB1P16220 341 aa3.97□□□□□ -1.77
TDP1-217ENST00000557782 IGFBP2P18065 325 aa3.97□□□□□ -1.77
TDP1-217ENST00000557782 ERCC2P18074 760 aa3.97□□□□□ -1.77
TDP1-217ENST00000557782 SSTR4P31391 388 aa3.97□□□□□ -1.77
TDP1-217ENST00000557782 RPS19P39019 145 aaKnown RBP3.97□□□□□ -1.77
TDP1-217ENST00000557782 GABRB2P47870 512 aa3.97□□□□□ -1.77
TDP1-217ENST00000557782 CLK3P49761 638 aaKnown RBP3.97□□□□□ -1.77
TDP1-217ENST00000557782 CAMPP49913 170 aa3.97□□□□□ -1.77
TDP1-217ENST00000557782 GNAQP50148 359 aa3.97□□□□□ -1.77
TDP1-217ENST00000557782 CSE1LP55060 971 aaKnown RBP3.97□□□□□ -1.77
TDP1-217ENST00000557782 NHLH2Q02577 135 aa3.97□□□□□ -1.77
TDP1-217ENST00000557782 CCDC15Q0P6D6 951 aa3.97□□□□□ -1.77
TDP1-217ENST00000557782 PTK6Q13882 451 aa3.97□□□□□ -1.77
TDP1-217ENST00000557782 NFE2L1Q14494 772 aa3.97□□□□□ -1.77
TDP1-217ENST00000557782 RRP1BQ14684 758 aaKnown RBP3.97□□□□□ -1.77
TDP1-217ENST00000557782 KCNB1Q14721 858 aa3.97□□□□□ -1.77
TDP1-217ENST00000557782 TNIP1Q15025 636 aa3.97□□□□□ -1.77
TDP1-217ENST00000557782 PTPN14Q15678 1187 aa3.97□□□□□ -1.77
TDP1-217ENST00000557782 ASTE1Q2TB18 679 aaPredicted RBP3.97□□□□□ -1.77
TDP1-217ENST00000557782 EDRF1Q3B7T1 1238 aa3.97□□□□□ -1.77
TDP1-217ENST00000557782 TEDDM1Q5T9Z0 273 aa3.97□□□□□ -1.77
TDP1-217ENST00000557782 DENND2CQ68D51 928 aa3.97□□□□□ -1.77
TDP1-217ENST00000557782 NAPEPLDQ6IQ20 393 aa3.97□□□□□ -1.77
TDP1-217ENST00000557782 C17orf99Q6UX52 265 aa3.97□□□□□ -1.77
TDP1-217ENST00000557782 SLC39A5Q6ZMH5 540 aa3.97□□□□□ -1.77
TDP1-217ENST00000557782 ERN2Q76MJ5 926 aaKnown RBP3.97□□□□□ -1.77
TDP1-217ENST00000557782 DTX2Q86UW9 622 aa3.97□□□□□ -1.77
TDP1-217ENST00000557782 TMPRSS6Q8IU80 811 aa3.97□□□□□ -1.77
TDP1-217ENST00000557782 SYT12Q8IV01 421 aa3.97□□□□□ -1.77
TDP1-217ENST00000557782 KBTBD2Q8IY47 623 aa3.97□□□□□ -1.77
TDP1-217ENST00000557782 GPR135Q8IZ08 494 aa3.97□□□□□ -1.77
TDP1-217ENST00000557782 Q8NA96 180 aa3.97□□□□□ -1.77
TDP1-217ENST00000557782 DNAAF1Q8NEP3 725 aa3.97□□□□□ -1.77
TDP1-217ENST00000557782 PSPC1Q8WXF1 523 aaKnown RBP3.97□□□□□ -1.77
TDP1-217ENST00000557782 GLG1Q92896 1179 aa3.97□□□□□ -1.77
TDP1-217ENST00000557782 ATP6V0A1Q93050 837 aa3.97□□□□□ -1.77
TDP1-217ENST00000557782 TMCO6Q96DC7 493 aa3.97□□□□□ -1.77
TDP1-217ENST00000557782 MMABQ96EY8 250 aaPredicted RBP3.97□□□□□ -1.77
TDP1-217ENST00000557782 WDYHV1Q96HA8 205 aa3.97□□□□□ -1.77
TDP1-217ENST00000557782 DCLRE1CQ96SD1 692 aaKnown RBP3.97□□□□□ -1.77
TDP1-217ENST00000557782 NEU1Q99519 415 aa3.97□□□□□ -1.77
TDP1-217ENST00000557782 MPHOSPH9Q99550 1183 aa3.97□□□□□ -1.77
TDP1-217ENST00000557782 DPYSL5Q9BPU6 564 aa3.97□□□□□ -1.77
TDP1-217ENST00000557782 ZSWIM1Q9BR11 485 aa3.97□□□□□ -1.77
TDP1-217ENST00000557782 HEMGNQ9BXL5 484 aa3.97□□□□□ -1.77
TDP1-217ENST00000557782 HDHD5Q9BXW7 423 aa3.97□□□□□ -1.77
TDP1-217ENST00000557782 AMBRA1Q9C0C7 1298 aa3.97□□□□□ -1.77
TDP1-217ENST00000557782 MCOLN1Q9GZU1 580 aa3.97□□□□□ -1.77
TDP1-217ENST00000557782 IKZF4Q9H2S9 585 aa3.97□□□□□ -1.77
TDP1-217ENST00000557782 TSPY26PQ9H489 355 aa3.97□□□□□ -1.77
TDP1-217ENST00000557782 CXorf56Q9H5V9 222 aa3.97□□□□□ -1.77
TDP1-217ENST00000557782 SFXN1Q9H9B4 322 aa3.97□□□□□ -1.77
TDP1-217ENST00000557782 SAP30LQ9HAJ7 183 aa3.97□□□□□ -1.77
TDP1-217ENST00000557782 CYP4F11Q9HBI6 524 aa3.97□□□□□ -1.77
TDP1-217ENST00000557782 ENTPD7Q9NQZ7 604 aa3.97□□□□□ -1.77
TDP1-217ENST00000557782 MBNL1Q9NR56 388 aaKnown RBP3.97□□□□□ -1.77
TDP1-217ENST00000557782 HPF1Q9NWY4 346 aa3.97□□□□□ -1.77
TDP1-217ENST00000557782 DDX43Q9NXZ2 648 aaKnown RBP3.97□□□□□ -1.77
TDP1-217ENST00000557782 DNAJB9Q9UBS3 223 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms