RNA–Protein interactions for RNA: ENST00000557750.1

RCCD1-209, Transcript of RCC1 domain containing 1, humanhuman

TSL 3

Gene RCCD1, Length 1,696 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-209ENST00000557750 FNDC3BQ53EP0 1204 aaKnown RBP12.52□□□□□ -0.4
RCCD1-209ENST00000557750 PPM1JQ5JR12 505 aa12.52□□□□□ -0.4
RCCD1-209ENST00000557750 SDE2Q6IQ49 451 aa12.52□□□□□ -0.4
RCCD1-209ENST00000557750 PKN3Q6P5Z2 889 aa12.52□□□□□ -0.4
RCCD1-209ENST00000557750 SERPINA13PQ6UXR4 307 aa12.52□□□□□ -0.4
RCCD1-209ENST00000557750 CCDC50Q8IVM0 306 aa12.52□□□□□ -0.4
RCCD1-209ENST00000557750 REXO1L1PQ8IX06 675 aa12.52□□□□□ -0.4
RCCD1-209ENST00000557750 KATNAL2Q8IYT4 538 aa12.52□□□□□ -0.4
RCCD1-209ENST00000557750 UMODL1-AS1Q8N2C9 162 aa12.52□□□□□ -0.4
RCCD1-209ENST00000557750 UBL4BQ8N7F7 174 aa12.52□□□□□ -0.4
RCCD1-209ENST00000557750 DCAF4L2Q8NA75 395 aa12.52□□□□□ -0.4
RCCD1-209ENST00000557750 IL17RCQ8NAC3 791 aa12.52□□□□□ -0.4
RCCD1-209ENST00000557750 TXNDC5Q8NBS9 432 aaKnown RBP12.52□□□□□ -0.4
RCCD1-209ENST00000557750 TRIM58Q8NG06 486 aa12.52□□□□□ -0.4
RCCD1-209ENST00000557750 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.52□□□□□ -0.4
RCCD1-209ENST00000557750 ARHGEF2Q92974 986 aaKnown RBP12.52□□□□□ -0.4
RCCD1-209ENST00000557750 ACDQ96AP0 544 aa12.52□□□□□ -0.4
RCCD1-209ENST00000557750 ACOX2Q99424 681 aa12.52□□□□□ -0.4
RCCD1-209ENST00000557750 MAK16Q9BXY0 300 aaKnown RBP12.52□□□□□ -0.4
RCCD1-209ENST00000557750 MAGEH1Q9H213 219 aa12.52□□□□□ -0.4
RCCD1-209ENST00000557750 SEMA4GQ9NTN9 838 aa12.52□□□□□ -0.4
RCCD1-209ENST00000557750 ETNK2Q9NVF9 386 aa12.52□□□□□ -0.4
RCCD1-209ENST00000557750 CACNA2D2Q9NY47 1150 aa12.52□□□□□ -0.4
RCCD1-209ENST00000557750 HCN2Q9UL51 889 aa12.52□□□□□ -0.4
RCCD1-209ENST00000557750 MFHAS1Q9Y4C4 1052 aa12.52□□□□□ -0.4
RCCD1-209ENST00000557750 PCDHA3Q9Y5H8 950 aa12.52□□□□□ -0.4
RCCD1-209ENST00000557750 MIF4GDA9UHW6 222 aaKnown RBP12.51□□□□□ -0.41
RCCD1-209ENST00000557750 RASA4BC9J798 803 aa12.51□□□□□ -0.41
RCCD1-209ENST00000557750 DCLK1O15075 740 aa12.51□□□□□ -0.41
RCCD1-209ENST00000557750 NPC1O15118 1278 aa12.51□□□□□ -0.41
RCCD1-209ENST00000557750 RASA4O43374 803 aa12.51□□□□□ -0.41
RCCD1-209ENST00000557750 SNAP91O60641 907 aa12.51□□□□□ -0.41
RCCD1-209ENST00000557750 LRP3O75074 770 aa12.51□□□□□ -0.41
RCCD1-209ENST00000557750 CTNNA2P26232 953 aa12.51□□□□□ -0.41
RCCD1-209ENST00000557750 SERPINB6P35237 376 aa12.51□□□□□ -0.41
RCCD1-209ENST00000557750 NDST2P52849 883 aa12.51□□□□□ -0.41
RCCD1-209ENST00000557750 RWDD2BP57060 319 aa12.51□□□□□ -0.41
RCCD1-209ENST00000557750 YBEYP58557 167 aaPredicted RBP12.51□□□□□ -0.41
RCCD1-209ENST00000557750 SIM2Q14190 667 aaPredicted RBP12.51□□□□□ -0.41
RCCD1-209ENST00000557750 PTPRNQ16849 979 aa12.51□□□□□ -0.41
RCCD1-209ENST00000557750 PARP15Q460N3 678 aa12.51□□□□□ -0.41
RCCD1-209ENST00000557750 MFSD7Q6UXD7 560 aa12.51□□□□□ -0.41
RCCD1-209ENST00000557750 RFX6Q8HWS3 928 aa12.51□□□□□ -0.41
RCCD1-209ENST00000557750 RCOR2Q8IZ40 523 aa12.51□□□□□ -0.41
RCCD1-209ENST00000557750 LZTR1Q8N653 840 aa12.51□□□□□ -0.41
RCCD1-209ENST00000557750 NPWQ8N729 165 aa12.51□□□□□ -0.41
RCCD1-209ENST00000557750 NETO2Q8NC67 525 aa12.51□□□□□ -0.41
RCCD1-209ENST00000557750 PCDH19Q8TAB3 1148 aa12.51□□□□□ -0.41
RCCD1-209ENST00000557750 HMCESQ96FZ2 354 aa12.51□□□□□ -0.41
RCCD1-209ENST00000557750 RBM41Q96IZ5 413 aaKnown RBP12.51□□□□□ -0.41
RCCD1-209ENST00000557750 RPL10LQ96L21 214 aaKnown RBP12.51□□□□□ -0.41
RCCD1-209ENST00000557750 RNF157Q96PX1 679 aa12.51□□□□□ -0.41
RCCD1-209ENST00000557750 PSMB7Q99436 277 aa12.51□□□□□ -0.41
RCCD1-209ENST00000557750 NOL6Q9H6R4 1146 aaKnown RBP12.51□□□□□ -0.41
RCCD1-209ENST00000557750 THAP10Q9P2Z0 257 aaPredicted RBP12.51□□□□□ -0.41
RCCD1-209ENST00000557750 VPS51Q9UID3 782 aa12.51□□□□□ -0.41
RCCD1-209ENST00000557750 SLC25A13Q9UJS0 675 aa12.51□□□□□ -0.41
RCCD1-209ENST00000557750 HPCAL4Q9UM19 191 aa12.51□□□□□ -0.41
RCCD1-209ENST00000557750 ERVW-1Q9UQF0 538 aa12.51□□□□□ -0.41
RCCD1-209ENST00000557750 C3orf70A6NLC5 250 aaPredicted RBP12.51□□□□□ -0.41
RCCD1-209ENST00000557750 WASH3PC4AMC7 463 aa12.51□□□□□ -0.41
RCCD1-209ENST00000557750 SGK1O00141 431 aa12.51□□□□□ -0.41
RCCD1-209ENST00000557750 DFFAO00273 331 aa12.51□□□□□ -0.41
RCCD1-209ENST00000557750 GDF9O60383 454 aa12.51□□□□□ -0.41
RCCD1-209ENST00000557750 CHRM1P11229 460 aaPredicted RBP12.51□□□□□ -0.41
RCCD1-209ENST00000557750 HNRNPLP14866 589 aaKnown RBP eCLIP12.51□□□□□ -0.41
RCCD1-209ENST00000557750 GLDCP23378 1020 aa12.51□□□□□ -0.41
RCCD1-209ENST00000557750 NTSR1P30989 418 aa12.51□□□□□ -0.41
RCCD1-209ENST00000557750 NNMTP40261 264 aa12.51□□□□□ -0.41
RCCD1-209ENST00000557750 IL12RB1P42701 662 aa12.51□□□□□ -0.41
RCCD1-209ENST00000557750 STK19P49842 368 aaPredicted RBP12.51□□□□□ -0.41
RCCD1-209ENST00000557750 LLGL1Q15334 1064 aa12.51□□□□□ -0.41
RCCD1-209ENST00000557750 HSF5Q4G112 596 aaPredicted RBP12.51□□□□□ -0.41
RCCD1-209ENST00000557750 EOGTQ5NDL2 527 aa12.51□□□□□ -0.41
RCCD1-209ENST00000557750 RETSATQ6NUM9 610 aa12.51□□□□□ -0.41
RCCD1-209ENST00000557750 SPOCD1Q6ZMY3 1216 aa12.51□□□□□ -0.41
RCCD1-209ENST00000557750 VSIG1Q86XK7 387 aa12.51□□□□□ -0.41
RCCD1-209ENST00000557750 SPEM1Q8N4L4 309 aa12.51□□□□□ -0.41
RCCD1-209ENST00000557750 EXD1Q8NHP7 514 aa12.51□□□□□ -0.41
RCCD1-209ENST00000557750 FAF2Q96CS3 445 aa12.51□□□□□ -0.41
RCCD1-209ENST00000557750 SLC39A8Q9C0K1 460 aa12.51□□□□□ -0.41
RCCD1-209ENST00000557750 LRRC19Q9H756 370 aa12.51□□□□□ -0.41
RCCD1-209ENST00000557750 POLR3BQ9NW08 1133 aaPredicted RBP12.51□□□□□ -0.41
RCCD1-209ENST00000557750 MMP17Q9ULZ9 603 aa12.51□□□□□ -0.41
RCCD1-209ENST00000557750 STON1Q9Y6Q2 735 aa12.51□□□□□ -0.41
RCCD1-209ENST00000557750 CNOT1A5YKK6 2376 aaKnown RBP12.5□□□□□ -0.41
RCCD1-209ENST00000557750 GOLGA6L9A6NEM1 432 aa12.5□□□□□ -0.41
RCCD1-209ENST00000557750 ARHGAP42A6NI28 874 aa12.5□□□□□ -0.41
RCCD1-209ENST00000557750 USP27XA6NNY8 438 aa12.5□□□□□ -0.41
RCCD1-209ENST00000557750 ZNF487B1APH4 448 aa12.5□□□□□ -0.41
RCCD1-209ENST00000557750 K7ESF4 209 aa12.5□□□□□ -0.41
RCCD1-209ENST00000557750 ADAM23O75077 832 aa12.5□□□□□ -0.41
RCCD1-209ENST00000557750 SRPRAP08240 638 aaKnown RBP12.5□□□□□ -0.41
RCCD1-209ENST00000557750 HOXB2P14652 356 aa12.5□□□□□ -0.41
RCCD1-209ENST00000557750 CDKN2BP42772 138 aa12.5□□□□□ -0.41
RCCD1-209ENST00000557750 PEX5P50542 639 aa12.5□□□□□ -0.41
RCCD1-209ENST00000557750 DYNLT1P63172 113 aa12.5□□□□□ -0.41
RCCD1-209ENST00000557750 CSRP2Q16527 193 aa12.5□□□□□ -0.41
RCCD1-209ENST00000557750 KAZNQ674X7 775 aa12.5□□□□□ -0.41
RCCD1-209ENST00000557750 NCBP2-AS2Q69YL0 99 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms