RNA–Protein interactions for RNA: ENST00000557439.5

XRCC3-218, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 2,599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-218ENST00000557439 EPGNQ6UW88 154 aa18.04■□□□□ 0.48
XRCC3-218ENST00000557439 BHLHA9Q7RTU4 235 aa18.04■□□□□ 0.48
XRCC3-218ENST00000557439 CLEC14AQ86T13 490 aa18.04■□□□□ 0.48
XRCC3-218ENST00000557439 SLC41A1Q8IVJ1 513 aa18.04■□□□□ 0.48
XRCC3-218ENST00000557439 RNF34Q969K3 372 aa18.04■□□□□ 0.48
XRCC3-218ENST00000557439 OMDQ99983 421 aa18.04■□□□□ 0.48
XRCC3-218ENST00000557439 SF3B1O75533 1304 aaKnown RBP eCLIP18.04■□□□□ 0.48
XRCC3-218ENST00000557439 SMIM24O75264 130 aa18.04■□□□□ 0.48
XRCC3-218ENST00000557439 PSEN1P49768 467 aa18.04■□□□□ 0.48
XRCC3-218ENST00000557439 LBRQ14739 615 aaKnown RBP18.04■□□□□ 0.48
XRCC3-218ENST00000557439 TMCO4Q5TGY1 634 aa18.04■□□□□ 0.48
XRCC3-218ENST00000557439 RNF148Q8N7C7 305 aa18.04■□□□□ 0.48
XRCC3-218ENST00000557439 NUF2Q9BZD4 464 aa18.04■□□□□ 0.48
XRCC3-218ENST00000557439 SORCS3Q9UPU3 1222 aa18.04■□□□□ 0.48
XRCC3-218ENST00000557439 CLEC11AQ9Y240 323 aa18.04■□□□□ 0.48
XRCC3-218ENST00000557439 TRIM13O60858 407 aa18.03■□□□□ 0.48
XRCC3-218ENST00000557439 RNASEH1O60930 286 aaKnown RBP18.03■□□□□ 0.48
XRCC3-218ENST00000557439 SERPINB6P35237 376 aa18.03■□□□□ 0.48
XRCC3-218ENST00000557439 DBN1Q16643 649 aa18.03■□□□□ 0.48
XRCC3-218ENST00000557439 PGM2L1Q6PCE3 622 aa18.03■□□□□ 0.48
XRCC3-218ENST00000557439 TAC4Q86UU9 113 aa18.03■□□□□ 0.48
XRCC3-218ENST00000557439 SGF29Q96ES7 293 aa18.03■□□□□ 0.48
XRCC3-218ENST00000557439 SCYL1Q96KG9 808 aa18.03■□□□□ 0.48
XRCC3-218ENST00000557439 SIKE1Q9BRV8 207 aa18.03■□□□□ 0.48
XRCC3-218ENST00000557439 ACE2Q9BYF1 805 aaPredicted RBP18.03■□□□□ 0.48
XRCC3-218ENST00000557439 TMEM233B4DJY2 109 aa18.03■□□□□ 0.48
XRCC3-218ENST00000557439 AXLP30530 894 aa18.03■□□□□ 0.48
XRCC3-218ENST00000557439 PGFP49763 221 aa18.03■□□□□ 0.48
XRCC3-218ENST00000557439 NAGLUP54802 743 aa18.03■□□□□ 0.48
XRCC3-218ENST00000557439 ZRSR2Q15696 482 aaKnown RBP18.03■□□□□ 0.48
XRCC3-218ENST00000557439 USP50Q70EL3 339 aaPredicted RBP18.03■□□□□ 0.48
XRCC3-218ENST00000557439 DHDDSQ86SQ9 333 aa18.03■□□□□ 0.48
XRCC3-218ENST00000557439 TMEM151AQ8N4L1 468 aa18.03■□□□□ 0.48
XRCC3-218ENST00000557439 SPDYE1Q8NFV5 336 aaPredicted RBP18.03■□□□□ 0.48
XRCC3-218ENST00000557439 ZSCAN18Q8TBC5 510 aaPredicted RBP18.03■□□□□ 0.48
XRCC3-218ENST00000557439 SLC2A6Q9UGQ3 507 aa18.03■□□□□ 0.48
XRCC3-218ENST00000557439 SSX2IPQ9Y2D8 614 aa18.03■□□□□ 0.48
XRCC3-218ENST00000557439 HHLA1C9JL84 531 aa18.02■□□□□ 0.48
XRCC3-218ENST00000557439 CCNT2O60583 730 aaKnown RBP18.02■□□□□ 0.48
XRCC3-218ENST00000557439 LYNP07948 512 aa18.02■□□□□ 0.48
XRCC3-218ENST00000557439 BDNFP23560 247 aa18.02■□□□□ 0.48
XRCC3-218ENST00000557439 GRIA4P48058 902 aa18.02■□□□□ 0.48
XRCC3-218ENST00000557439 USP10Q14694 798 aaKnown RBP18.02■□□□□ 0.48
XRCC3-218ENST00000557439 ARL13AQ5H913 290 aaPredicted RBP18.02■□□□□ 0.48
XRCC3-218ENST00000557439 MFSD6LQ8IWD5 586 aa18.02■□□□□ 0.48
XRCC3-218ENST00000557439 IPMKQ8NFU5 416 aa18.02■□□□□ 0.48
XRCC3-218ENST00000557439 ACTRT2Q8TDY3 377 aa18.02■□□□□ 0.48
XRCC3-218ENST00000557439 ISL2Q96A47 359 aa18.02■□□□□ 0.48
XRCC3-218ENST00000557439 TEKT5Q96M29 485 aa18.02■□□□□ 0.48
XRCC3-218ENST00000557439 TMEM209Q96SK2 561 aa18.02■□□□□ 0.48
XRCC3-218ENST00000557439 TCF7L2Q9NQB0 619 aa18.02■□□□□ 0.48
XRCC3-218ENST00000557439 NDFIP2Q9NV92 336 aa18.02■□□□□ 0.48
XRCC3-218ENST00000557439 ZDHHC2Q9UIJ5 367 aa18.02■□□□□ 0.48
XRCC3-218ENST00000557439 PIGNO95427 931 aa18.02■□□□□ 0.47
XRCC3-218ENST00000557439 AHSGP02765 367 aa18.02■□□□□ 0.47
XRCC3-218ENST00000557439 RAG1P15918 1043 aa18.02■□□□□ 0.47
XRCC3-218ENST00000557439 LRPAP1P30533 357 aa18.02■□□□□ 0.47
XRCC3-218ENST00000557439 SCNN1GP51170 649 aa18.02■□□□□ 0.47
XRCC3-218ENST00000557439 AQP4P55087 323 aa18.02■□□□□ 0.47
XRCC3-218ENST00000557439 GALNT2Q10471 571 aa18.02■□□□□ 0.47
XRCC3-218ENST00000557439 NOMO2Q5JPE7 1267 aa18.02■□□□□ 0.47
XRCC3-218ENST00000557439 SCAMP5Q8TAC9 235 aa18.02■□□□□ 0.47
XRCC3-218ENST00000557439 NTAN1Q96AB6 310 aa18.02■□□□□ 0.47
XRCC3-218ENST00000557439 HDAC11Q96DB2 347 aa18.02■□□□□ 0.47
XRCC3-218ENST00000557439 CMTM5Q96DZ9 223 aa18.02■□□□□ 0.47
XRCC3-218ENST00000557439 VCXQ9H320 206 aa18.02■□□□□ 0.47
XRCC3-218ENST00000557439 STN1Q9H668 368 aaKnown RBP18.02■□□□□ 0.47
XRCC3-218ENST00000557439 GPAMQ9HCL2 828 aa18.02■□□□□ 0.47
XRCC3-218ENST00000557439 RUVBL2Q9Y230 463 aaKnown RBP18.02■□□□□ 0.47
XRCC3-218ENST00000557439 CDY2AQ9Y6F7 541 aa18.02■□□□□ 0.47
XRCC3-218ENST00000557439 CDY1Q9Y6F8 540 aa18.02■□□□□ 0.47
XRCC3-218ENST00000557439 ATP5BP06576 529 aaKnown RBP18.01■□□□□ 0.47
XRCC3-218ENST00000557439 CRABP2P29373 138 aa18.01■□□□□ 0.47
XRCC3-218ENST00000557439 NUDT2P50583 147 aa18.01■□□□□ 0.47
XRCC3-218ENST00000557439 MSLNQ13421 630 aaPredicted RBP18.01■□□□□ 0.47
XRCC3-218ENST00000557439 LSM12Q3MHD2 195 aaKnown RBP18.01■□□□□ 0.47
XRCC3-218ENST00000557439 RPS27LQ71UM5 84 aaKnown RBP18.01■□□□□ 0.47
XRCC3-218ENST00000557439 PDZD4Q76G19 769 aaPredicted RBP18.01■□□□□ 0.47
XRCC3-218ENST00000557439 ZC3HC1Q86WB0 502 aaKnown RBP18.01■□□□□ 0.47
XRCC3-218ENST00000557439 SNX32Q86XE0 403 aa18.01■□□□□ 0.47
XRCC3-218ENST00000557439 CEP97Q8IW35 865 aa18.01■□□□□ 0.47
XRCC3-218ENST00000557439 IFT43Q96FT9 208 aa18.01■□□□□ 0.47
XRCC3-218ENST00000557439 CATSPER2Q96P56 530 aa18.01■□□□□ 0.47
XRCC3-218ENST00000557439 C1QTNF1Q9BXJ1 281 aa18.01■□□□□ 0.47
XRCC3-218ENST00000557439 TMLHEQ9NVH6 421 aa18.01■□□□□ 0.47
XRCC3-218ENST00000557439 OXSMQ9NWU1 459 aa18.01■□□□□ 0.47
XRCC3-218ENST00000557439 ADAM28Q9UKQ2 775 aa18.01■□□□□ 0.47
XRCC3-218ENST00000557439 MAGEA13PA6NCF6 341 aa18.01■□□□□ 0.47
XRCC3-218ENST00000557439 AURKAO14965 403 aa18.01■□□□□ 0.47
XRCC3-218ENST00000557439 MSI1O43347 362 aaKnown RBP18.01■□□□□ 0.47
XRCC3-218ENST00000557439 VAPBO95292 243 aa18.01■□□□□ 0.47
XRCC3-218ENST00000557439 SCAPQ12770 1279 aa18.01■□□□□ 0.47
XRCC3-218ENST00000557439 PDCD2Q16342 344 aaPredicted RBP18.01■□□□□ 0.47
XRCC3-218ENST00000557439 NXNQ6DKJ4 435 aa18.01■□□□□ 0.47
XRCC3-218ENST00000557439 ESRP1Q6NXG1 681 aaKnown RBP18.01■□□□□ 0.47
XRCC3-218ENST00000557439 ZNF483Q8TF39 744 aaPredicted RBP18.01■□□□□ 0.47
XRCC3-218ENST00000557439 MYLPFQ96A32 169 aa18.01■□□□□ 0.47
XRCC3-218ENST00000557439 FIS1Q9Y3D6 152 aa18.01■□□□□ 0.47
XRCC3-218ENST00000557439 MYLKQ15746 1914 aa18.01■□□□□ 0.47
XRCC3-218ENST00000557439 F8W810 466 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms