RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 LMBRD1Q9NUN5 540 aa14.52□□□□□ -0.09
SNX6-210ENST00000557341 MPP6Q9NZW5 540 aa14.52□□□□□ -0.09
SNX6-210ENST00000557341 TMEM59LQ9UK28 342 aa14.52□□□□□ -0.09
SNX6-210ENST00000557341 NOCTQ9UK39 431 aaKnown RBP14.52□□□□□ -0.09
SNX6-210ENST00000557341 PPM1HQ9ULR3 514 aa14.52□□□□□ -0.09
SNX6-210ENST00000557341 DMTF1Q9Y222 760 aa14.52□□□□□ -0.09
SNX6-210ENST00000557341 DAAM1Q9Y4D1 1078 aa14.52□□□□□ -0.09
SNX6-210ENST00000557341 ARID1BQ8NFD5 2236 aaPredicted RBP14.51□□□□□ -0.09
SNX6-210ENST00000557341 ACACAQ13085 2346 aa14.51□□□□□ -0.09
SNX6-210ENST00000557341 DRGXA6NNA5 263 aa14.51□□□□□ -0.09
SNX6-210ENST00000557341 WNT9AO14904 365 aa14.51□□□□□ -0.09
SNX6-210ENST00000557341 GFPT2O94808 682 aa14.51□□□□□ -0.09
SNX6-210ENST00000557341 RRM1P23921 792 aa14.51□□□□□ -0.09
SNX6-210ENST00000557341 ARRB1P49407 418 aaPredicted RBP14.51□□□□□ -0.09
SNX6-210ENST00000557341 NXPH1P58417 271 aa14.51□□□□□ -0.09
SNX6-210ENST00000557341 POLR2FP61218 127 aaKnown RBP14.51□□□□□ -0.09
SNX6-210ENST00000557341 CDR2Q01850 454 aa14.51□□□□□ -0.09
SNX6-210ENST00000557341 SCAPQ12770 1279 aa14.51□□□□□ -0.09
SNX6-210ENST00000557341 KRT31Q15323 416 aa14.51□□□□□ -0.09
SNX6-210ENST00000557341 SETMARQ53H47 684 aaPredicted RBP14.51□□□□□ -0.09
SNX6-210ENST00000557341 C22orf39Q6P5X5 142 aa14.51□□□□□ -0.09
SNX6-210ENST00000557341 CCNI2Q6ZMN8 369 aaPredicted RBP14.51□□□□□ -0.09
SNX6-210ENST00000557341 ZNF783Q6ZMS7 281 aa14.51□□□□□ -0.09
SNX6-210ENST00000557341 TMPRSS7Q7RTY8 843 aa14.51□□□□□ -0.09
SNX6-210ENST00000557341 FAM131BQ86XD5 332 aa14.51□□□□□ -0.09
SNX6-210ENST00000557341 PROSER1Q86XN7 944 aa14.51□□□□□ -0.09
SNX6-210ENST00000557341 GATAD2AQ86YP4 633 aa14.51□□□□□ -0.09
SNX6-210ENST00000557341 GALNT15Q8N3T1 639 aa14.51□□□□□ -0.09
SNX6-210ENST00000557341 MFSD2AQ8NA29 543 aa14.51□□□□□ -0.09
SNX6-210ENST00000557341 SLC20A1Q8WUM9 679 aa14.51□□□□□ -0.09
SNX6-210ENST00000557341 PREBQ9HCU5 417 aa14.51□□□□□ -0.09
SNX6-210ENST00000557341 FAM207AQ9NSI2 230 aaPredicted RBP14.51□□□□□ -0.09
SNX6-210ENST00000557341 ARHGAP20Q9P2F6 1191 aa14.51□□□□□ -0.09
SNX6-210ENST00000557341 CELSR3Q9NYQ7 3312 aa14.5□□□□□ -0.09
SNX6-210ENST00000557341 ZFYVE26Q68DK2 2539 aa14.5□□□□□ -0.09
SNX6-210ENST00000557341 LRRK1Q38SD2 2015 aa14.5□□□□□ -0.09
SNX6-210ENST00000557341 A0A0D9SEW6 157 aa14.5□□□□□ -0.09
SNX6-210ENST00000557341 TLR4O00206 839 aa14.5□□□□□ -0.09
SNX6-210ENST00000557341 KPNA3O00505 521 aaPredicted RBP14.5□□□□□ -0.09
SNX6-210ENST00000557341 MAGEC1O60732 1142 aa14.5□□□□□ -0.09
SNX6-210ENST00000557341 SRGAP2O75044 1071 aa14.5□□□□□ -0.09
SNX6-210ENST00000557341 MT-CO1P00395 513 aa14.5□□□□□ -0.09
SNX6-210ENST00000557341 PRNPP04156 253 aa14.5□□□□□ -0.09
SNX6-210ENST00000557341 ITGAVP06756 1048 aa14.5□□□□□ -0.09
SNX6-210ENST00000557341 CTSLP07711 333 aa14.5□□□□□ -0.09
SNX6-210ENST00000557341 MMP8P22894 467 aa14.5□□□□□ -0.09
SNX6-210ENST00000557341 EPHA8P29322 1005 aaPredicted RBP14.5□□□□□ -0.09
SNX6-210ENST00000557341 MAT2AP31153 395 aaKnown RBP14.5□□□□□ -0.09
SNX6-210ENST00000557341 SOX5P35711 763 aa14.5□□□□□ -0.09
SNX6-210ENST00000557341 RECQLP46063 649 aaPredicted RBP14.5□□□□□ -0.09
SNX6-210ENST00000557341 KLK7P49862 253 aa14.5□□□□□ -0.09
SNX6-210ENST00000557341 JAM2P57087 298 aa14.5□□□□□ -0.09
SNX6-210ENST00000557341 ATP11AP98196 1134 aa14.5□□□□□ -0.09
SNX6-210ENST00000557341 CCDC15Q0P6D6 951 aa14.5□□□□□ -0.09
SNX6-210ENST00000557341 OVGP1Q12889 678 aa14.5□□□□□ -0.09
SNX6-210ENST00000557341 PIP5KL1Q5T9C9 394 aa14.5□□□□□ -0.09
SNX6-210ENST00000557341 TRIM72Q6ZMU5 477 aa14.5□□□□□ -0.09
SNX6-210ENST00000557341 RBM43Q6ZSC3 357 aaKnown RBP14.5□□□□□ -0.09
SNX6-210ENST00000557341 IQCHQ86VS3 1027 aa14.5□□□□□ -0.09
SNX6-210ENST00000557341 EMC1Q8N766 993 aa14.5□□□□□ -0.09
SNX6-210ENST00000557341 OR2A12Q8NGT7 310 aa14.5□□□□□ -0.09
SNX6-210ENST00000557341 ZYG11BQ9C0D3 744 aa14.5□□□□□ -0.09
SNX6-210ENST00000557341 ERVMER34-1Q9H9K5 563 aa14.5□□□□□ -0.09
SNX6-210ENST00000557341 NLRC4Q9NPP4 1024 aa14.5□□□□□ -0.09
SNX6-210ENST00000557341 DYRK4Q9NR20 520 aa14.5□□□□□ -0.09
SNX6-210ENST00000557341 ILVBLA1L0T0 632 aa14.49□□□□□ -0.09
SNX6-210ENST00000557341 PRAMEF26H0Y7S4 382 aa14.49□□□□□ -0.09
SNX6-210ENST00000557341 K7ERQ8 282 aa14.49□□□□□ -0.09
SNX6-210ENST00000557341 CBX4O00257 560 aa14.49□□□□□ -0.09
SNX6-210ENST00000557341 SMAD6O43541 496 aaKnown RBP14.49□□□□□ -0.09
SNX6-210ENST00000557341 CYP1A1P04798 512 aaPredicted RBP14.49□□□□□ -0.09
SNX6-210ENST00000557341 SDC4P31431 198 aa14.49□□□□□ -0.09
SNX6-210ENST00000557341 CHRNA3P32297 505 aa14.49□□□□□ -0.09
SNX6-210ENST00000557341 SERPINH1P50454 418 aaKnown RBP14.49□□□□□ -0.09
SNX6-210ENST00000557341 TAS2R38P59533 333 aa14.49□□□□□ -0.09
SNX6-210ENST00000557341 FMO1Q01740 532 aa14.49□□□□□ -0.09
SNX6-210ENST00000557341 SHBQ15464 509 aa14.49□□□□□ -0.09
SNX6-210ENST00000557341 CDO1Q16878 200 aa14.49□□□□□ -0.09
SNX6-210ENST00000557341 ARL13BQ3SXY8 428 aa14.49□□□□□ -0.09
SNX6-210ENST00000557341 CCDC157Q569K6 752 aa14.49□□□□□ -0.09
SNX6-210ENST00000557341 PRAMEF14Q5SWL7 426 aa14.49□□□□□ -0.09
SNX6-210ENST00000557341 RETSATQ6NUM9 610 aa14.49□□□□□ -0.09
SNX6-210ENST00000557341 LINGO4Q6UY18 593 aa14.49□□□□□ -0.09
SNX6-210ENST00000557341 TMIEQ8NEW7 156 aa14.49□□□□□ -0.09
SNX6-210ENST00000557341 ANKRD20A12PQ8NF67 263 aa14.49□□□□□ -0.09
SNX6-210ENST00000557341 OR7D4Q8NG98 312 aa14.49□□□□□ -0.09
SNX6-210ENST00000557341 GRIN3AQ8TCU5 1115 aa14.49□□□□□ -0.09
SNX6-210ENST00000557341 SAP25Q8TEE9 199 aa14.49□□□□□ -0.09
SNX6-210ENST00000557341 PPP1R16AQ96I34 528 aa14.49□□□□□ -0.09
SNX6-210ENST00000557341 GBP4Q96PP9 640 aa14.49□□□□□ -0.09
SNX6-210ENST00000557341 C11orf70Q9BRQ4 267 aa14.49□□□□□ -0.09
SNX6-210ENST00000557341 CCDC86Q9H6F5 360 aaKnown RBP14.49□□□□□ -0.09
SNX6-210ENST00000557341 ATP13A1Q9HD20 1204 aa14.49□□□□□ -0.09
SNX6-210ENST00000557341 PPARGC1AQ9UBK2 798 aaKnown RBP14.49□□□□□ -0.09
SNX6-210ENST00000557341 ZNF212Q9UDV6 495 aa14.49□□□□□ -0.09
SNX6-210ENST00000557341 IL36AQ9UHA7 158 aa14.49□□□□□ -0.09
SNX6-210ENST00000557341 ENC1O14682 589 aa14.48□□□□□ -0.09
SNX6-210ENST00000557341 EPHB6O15197 1021 aa14.48□□□□□ -0.09
SNX6-210ENST00000557341 RNGTTO60942 597 aaKnown RBP14.48□□□□□ -0.09
SNX6-210ENST00000557341 ENDOD1O94919 500 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms