RNA–Protein interactions for RNA: ENST00000557159.5

APEX1-216, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 2

Gene APEX1, Length 1,803 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-216ENST00000557159 ZNF699Q32M78 642 aa12.78□□□□□ -0.36
APEX1-216ENST00000557159 CCDC92Q53HC0 331 aaPredicted RBP12.78□□□□□ -0.36
APEX1-216ENST00000557159 KRT80Q6KB66 452 aa12.78□□□□□ -0.36
APEX1-216ENST00000557159 FIBCD1Q8N539 461 aa12.78□□□□□ -0.36
APEX1-216ENST00000557159 ANKFN1Q8N957 763 aa12.78□□□□□ -0.36
APEX1-216ENST00000557159 SHCBP1Q8NEM2 672 aa12.78□□□□□ -0.36
APEX1-216ENST00000557159 PCDH19Q8TAB3 1148 aa12.78□□□□□ -0.36
APEX1-216ENST00000557159 CHPT1Q8WUD6 406 aa12.78□□□□□ -0.36
APEX1-216ENST00000557159 TMIGD2Q96BF3 282 aa12.78□□□□□ -0.36
APEX1-216ENST00000557159 QKIQ96PU8 341 aaKnown RBP eCLIP12.78□□□□□ -0.36
APEX1-216ENST00000557159 ADPGKQ9BRR6 497 aa12.78□□□□□ -0.36
APEX1-216ENST00000557159 EFHD1Q9BUP0 239 aa12.78□□□□□ -0.36
APEX1-216ENST00000557159 TARS2Q9BW92 718 aaKnown RBP12.78□□□□□ -0.36
APEX1-216ENST00000557159 DRC3Q9H069 523 aa12.78□□□□□ -0.36
APEX1-216ENST00000557159 CCDC68Q9H2F9 335 aa12.78□□□□□ -0.36
APEX1-216ENST00000557159 COQ10BQ9H8M1 238 aa12.78□□□□□ -0.36
APEX1-216ENST00000557159 MRM3Q9HC36 420 aaKnown RBP12.78□□□□□ -0.36
APEX1-216ENST00000557159 TJP2Q9UDY2 1190 aa12.78□□□□□ -0.36
APEX1-216ENST00000557159 GNPTGQ9UJJ9 305 aa12.78□□□□□ -0.36
APEX1-216ENST00000557159 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.78□□□□□ -0.36
APEX1-216ENST00000557159 HTTP42858 3142 aa12.78□□□□□ -0.36
APEX1-216ENST00000557159 MYOCOSA0A1B0GUC4 107 aa12.77□□□□□ -0.37
APEX1-216ENST00000557159 FUOMA2VDF0 154 aa12.77□□□□□ -0.37
APEX1-216ENST00000557159 HACD1B0YJ81 288 aa12.77□□□□□ -0.37
APEX1-216ENST00000557159 MAFO75444 373 aaPredicted RBP12.77□□□□□ -0.37
APEX1-216ENST00000557159 ESRRBO95718 433 aa12.77□□□□□ -0.37
APEX1-216ENST00000557159 BMP2P12643 396 aa12.77□□□□□ -0.37
APEX1-216ENST00000557159 UBA1P22314 1058 aaKnown RBP12.77□□□□□ -0.37
APEX1-216ENST00000557159 SERPINB5P36952 375 aa12.77□□□□□ -0.37
APEX1-216ENST00000557159 HADHAP40939 763 aa12.77□□□□□ -0.37
APEX1-216ENST00000557159 STT3AP46977 705 aa12.77□□□□□ -0.37
APEX1-216ENST00000557159 RPL14P50914 215 aaKnown RBP12.77□□□□□ -0.37
APEX1-216ENST00000557159 MLLT1Q03111 559 aaPredicted RBP12.77□□□□□ -0.37
APEX1-216ENST00000557159 NSUN2Q08J23 767 aaKnown RBP eCLIP12.77□□□□□ -0.37
APEX1-216ENST00000557159 PRKAA1Q13131 559 aa12.77□□□□□ -0.37
APEX1-216ENST00000557159 ART3Q13508 389 aa12.77□□□□□ -0.37
APEX1-216ENST00000557159 MXD4Q14582 209 aaPredicted RBP12.77□□□□□ -0.37
APEX1-216ENST00000557159 PDK1Q15118 436 aa12.77□□□□□ -0.37
APEX1-216ENST00000557159 CYTH1Q15438 398 aa12.77□□□□□ -0.37
APEX1-216ENST00000557159 LSM12Q3MHD2 195 aaKnown RBP12.77□□□□□ -0.37
APEX1-216ENST00000557159 NHSL2Q5HYW2 709 aa12.77□□□□□ -0.37
APEX1-216ENST00000557159 SPANXN3Q5MJ09 141 aa12.77□□□□□ -0.37
APEX1-216ENST00000557159 IER5Q5VY09 327 aa12.77□□□□□ -0.37
APEX1-216ENST00000557159 SEL1L3Q68CR1 1132 aa12.77□□□□□ -0.37
APEX1-216ENST00000557159 DCDC5Q6ZRR9 648 aa12.77□□□□□ -0.37
APEX1-216ENST00000557159 ARNTL2Q8WYA1 636 aa12.77□□□□□ -0.37
APEX1-216ENST00000557159 TFAP2CQ92754 450 aa12.77□□□□□ -0.37
APEX1-216ENST00000557159 RCN3Q96D15 328 aa12.77□□□□□ -0.37
APEX1-216ENST00000557159 ACO2Q99798 780 aaKnown RBP12.77□□□□□ -0.37
APEX1-216ENST00000557159 TMEM79Q9BSE2 394 aa12.77□□□□□ -0.37
APEX1-216ENST00000557159 IL22Q9GZX6 179 aa12.77□□□□□ -0.37
APEX1-216ENST00000557159 MROH8Q9H579 483 aa12.77□□□□□ -0.37
APEX1-216ENST00000557159 TMEM165Q9HC07 324 aa12.77□□□□□ -0.37
APEX1-216ENST00000557159 OXSMQ9NWU1 459 aa12.77□□□□□ -0.37
APEX1-216ENST00000557159 C9IYK1 514 aa12.76□□□□□ -0.37
APEX1-216ENST00000557159 PAPSS1O43252 624 aaPredicted RBP12.76□□□□□ -0.37
APEX1-216ENST00000557159 B4GALT4O60513 344 aa12.76□□□□□ -0.37
APEX1-216ENST00000557159 MCF2P10911 925 aa12.76□□□□□ -0.37
APEX1-216ENST00000557159 P4HA1P13674 534 aa12.76□□□□□ -0.37
APEX1-216ENST00000557159 ADORA2AP29274 412 aa12.76□□□□□ -0.37
APEX1-216ENST00000557159 SPRP35270 261 aaPredicted RBP12.76□□□□□ -0.37
APEX1-216ENST00000557159 DPP6P42658 865 aa12.76□□□□□ -0.37
APEX1-216ENST00000557159 GPD2P43304 727 aa12.76□□□□□ -0.37
APEX1-216ENST00000557159 BCAP31P51572 246 aa12.76□□□□□ -0.37
APEX1-216ENST00000557159 LIMK2P53671 638 aa12.76□□□□□ -0.37
APEX1-216ENST00000557159 NAA20P61599 178 aa12.76□□□□□ -0.37
APEX1-216ENST00000557159 SP3Q02447 781 aa12.76□□□□□ -0.37
APEX1-216ENST00000557159 GRSF1Q12849 480 aaKnown RBP eCLIP12.76□□□□□ -0.373e-8■■□□□ 11.4
APEX1-216ENST00000557159 BCL2A1Q16548 175 aa12.76□□□□□ -0.37
APEX1-216ENST00000557159 MOGQ16653 247 aa12.76□□□□□ -0.37
APEX1-216ENST00000557159 ZNF394Q53GI3 561 aa12.76□□□□□ -0.37
APEX1-216ENST00000557159 IL23RQ5VWK5 629 aa12.76□□□□□ -0.37
APEX1-216ENST00000557159 NIPAL1Q6NVV3 410 aa12.76□□□□□ -0.37
APEX1-216ENST00000557159 PLPPR4Q7Z2D5 763 aa12.76□□□□□ -0.37
APEX1-216ENST00000557159 GOLM1Q8NBJ4 401 aa12.76□□□□□ -0.37
APEX1-216ENST00000557159 DDHD1Q8NEL9 900 aa12.76□□□□□ -0.37
APEX1-216ENST00000557159 C12orf43Q96C57 262 aaKnown RBP12.76□□□□□ -0.37
APEX1-216ENST00000557159 MTMR12Q9C0I1 747 aa12.76□□□□□ -0.37
APEX1-216ENST00000557159 BRD8Q9H0E9 1235 aa12.76□□□□□ -0.37
APEX1-216ENST00000557159 UNC93B1Q9H1C4 597 aa12.76□□□□□ -0.37
APEX1-216ENST00000557159 RNPEPQ9H4A4 650 aa12.76□□□□□ -0.37
APEX1-216ENST00000557159 PFDN4Q9NQP4 134 aa12.76□□□□□ -0.37
APEX1-216ENST00000557159 SNX15Q9NRS6 342 aa12.76□□□□□ -0.37
APEX1-216ENST00000557159 SLC38A7Q9NVC3 462 aa12.76□□□□□ -0.37
APEX1-216ENST00000557159 COQ6Q9Y2Z9 468 aa12.76□□□□□ -0.37
APEX1-216ENST00000557159 ZNF711Q9Y462 761 aa12.76□□□□□ -0.37
APEX1-216ENST00000557159 SLC30A1Q9Y6M5 507 aa12.76□□□□□ -0.37
APEX1-216ENST00000557159 ANK1P16157 1881 aa12.76□□□□□ -0.37
APEX1-216ENST00000557159 WDR27A2RRH5 827 aa12.76□□□□□ -0.37
APEX1-216ENST00000557159 SOWAHBA6NEL2 793 aa12.76□□□□□ -0.37
APEX1-216ENST00000557159 TCAF2A6NFQ2 919 aa12.76□□□□□ -0.37
APEX1-216ENST00000557159 LRRIQ4A6NIV6 560 aa12.76□□□□□ -0.37
APEX1-216ENST00000557159 BOLA2-SMG1P6H3BVE0 249 aa12.76□□□□□ -0.37
APEX1-216ENST00000557159 OGTO15294 1046 aa12.76□□□□□ -0.37
APEX1-216ENST00000557159 HTRA2O43464 458 aaPredicted RBP12.76□□□□□ -0.37
APEX1-216ENST00000557159 VAPBO95292 243 aa12.76□□□□□ -0.37
APEX1-216ENST00000557159 PDGFRBP09619 1106 aa12.76□□□□□ -0.37
APEX1-216ENST00000557159 CD19P15391 556 aa12.76□□□□□ -0.37
APEX1-216ENST00000557159 MYF6P23409 242 aa12.76□□□□□ -0.37
APEX1-216ENST00000557159 CSRP3P50461 194 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms