RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 PIM2Q9P1W9 311 aa11.59□□□□□ -0.55
SRP54-213ENST00000556994 IGSF9Q9P2J2 1179 aa11.59□□□□□ -0.55
SRP54-213ENST00000556994 CLDN5O00501 218 aa11.59□□□□□ -0.55
SRP54-213ENST00000556994 CSPG5O95196 566 aa11.59□□□□□ -0.55
SRP54-213ENST00000556994 TNFAIP8O95379 198 aa11.59□□□□□ -0.55
SRP54-213ENST00000556994 AP2A1O95782 977 aa11.59□□□□□ -0.55
SRP54-213ENST00000556994 FAM58BPP0C7Q3 252 aa11.59□□□□□ -0.55
SRP54-213ENST00000556994 PTPN1P18031 435 aaKnown RBP11.59□□□□□ -0.55
SRP54-213ENST00000556994 FGFR3P22607 806 aa11.59□□□□□ -0.55
SRP54-213ENST00000556994 TKTP29401 623 aaKnown RBP11.59□□□□□ -0.55
SRP54-213ENST00000556994 GNL1P36915 607 aaPredicted RBP11.59□□□□□ -0.55
SRP54-213ENST00000556994 SH3D19Q5HYK7 790 aa11.59□□□□□ -0.55
SRP54-213ENST00000556994 IL23RQ5VWK5 629 aa11.59□□□□□ -0.55
SRP54-213ENST00000556994 SULF1Q8IWU6 871 aa11.59□□□□□ -0.55
SRP54-213ENST00000556994 PCDH20Q8N6Y1 951 aaKnown RBP11.59□□□□□ -0.55
SRP54-213ENST00000556994 CCNYL1Q8N7R7 359 aa11.59□□□□□ -0.55
SRP54-213ENST00000556994 RNF169Q8NCN4 708 aa11.59□□□□□ -0.55
SRP54-213ENST00000556994 CNDP1Q96KN2 507 aa11.59□□□□□ -0.55
SRP54-213ENST00000556994 EIF2AQ9BY44 585 aaKnown RBP11.59□□□□□ -0.55
SRP54-213ENST00000556994 MRPL1Q9BYD6 325 aaKnown RBP11.59□□□□□ -0.55
SRP54-213ENST00000556994 MRPS26Q9BYN8 205 aaKnown RBP11.59□□□□□ -0.55
SRP54-213ENST00000556994 RBM38Q9H0Z9 239 aaKnown RBP11.59□□□□□ -0.55
SRP54-213ENST00000556994 PCDHAC1Q9H158 963 aa11.59□□□□□ -0.55
SRP54-213ENST00000556994 ANLNQ9NQW6 1124 aa11.59□□□□□ -0.55
SRP54-213ENST00000556994 GALNT8Q9NY28 637 aa11.59□□□□□ -0.55
SRP54-213ENST00000556994 TLK1Q9UKI8 766 aa11.59□□□□□ -0.55
SRP54-213ENST00000556994 COPG1Q9Y678 874 aaKnown RBP11.59□□□□□ -0.55
SRP54-213ENST00000556994 DNAH12Q6ZR08 3092 aa11.59□□□□□ -0.55
SRP54-213ENST00000556994 SPTLC1O15269 473 aa11.58□□□□□ -0.56
SRP54-213ENST00000556994 USP2O75604 605 aaPredicted RBP11.58□□□□□ -0.56
SRP54-213ENST00000556994 BEST1O76090 585 aa11.58□□□□□ -0.56
SRP54-213ENST00000556994 ERCC2P18074 760 aa11.58□□□□□ -0.56
SRP54-213ENST00000556994 AKAP5P24588 427 aa11.58□□□□□ -0.56
SRP54-213ENST00000556994 CD68P34810 354 aaPredicted RBP11.58□□□□□ -0.56
SRP54-213ENST00000556994 SLC26A2P50443 739 aa11.58□□□□□ -0.56
SRP54-213ENST00000556994 USP10Q14694 798 aaKnown RBP11.58□□□□□ -0.56
SRP54-213ENST00000556994 KIZQ2M2Z5 673 aa11.58□□□□□ -0.56
SRP54-213ENST00000556994 LIPMQ5VYY2 423 aa11.58□□□□□ -0.56
SRP54-213ENST00000556994 ARHGAP17Q68EM7 881 aa11.58□□□□□ -0.56
SRP54-213ENST00000556994 GK5Q6ZS86 529 aa11.58□□□□□ -0.56
SRP54-213ENST00000556994 HFE2Q6ZVN8 426 aa11.58□□□□□ -0.56
SRP54-213ENST00000556994 PIGZQ86VD9 579 aa11.58□□□□□ -0.56
SRP54-213ENST00000556994 PGAM4Q8N0Y7 254 aa11.58□□□□□ -0.56
SRP54-213ENST00000556994 LSMEM2Q8N112 164 aa11.58□□□□□ -0.56
SRP54-213ENST00000556994 SNX31Q8N9S9 440 aa11.58□□□□□ -0.56
SRP54-213ENST00000556994 ADCY4Q8NFM4 1077 aa11.58□□□□□ -0.56
SRP54-213ENST00000556994 GRIN3AQ8TCU5 1115 aa11.58□□□□□ -0.56
SRP54-213ENST00000556994 PDCD6IPQ8WUM4 868 aaKnown RBP11.58□□□□□ -0.56
SRP54-213ENST00000556994 SGF29Q96ES7 293 aa11.58□□□□□ -0.56
SRP54-213ENST00000556994 MLPHQ9BV36 600 aaPredicted RBP11.58□□□□□ -0.56
SRP54-213ENST00000556994 MAF1Q9H063 256 aa11.58□□□□□ -0.56
SRP54-213ENST00000556994 PIGVQ9NUD9 493 aa11.58□□□□□ -0.56
SRP54-213ENST00000556994 ADA2Q9NZK5 511 aa11.58□□□□□ -0.56
SRP54-213ENST00000556994 PPP1R1BQ9UD71 204 aaPredicted RBP11.58□□□□□ -0.56
SRP54-213ENST00000556994 CDYLQ9Y232 598 aa11.58□□□□□ -0.56
SRP54-213ENST00000556994 LOC285556D6RIA3 1793 aa11.58□□□□□ -0.56
SRP54-213ENST00000556994 PRSS51A0A1B0GVH4 220 aa11.58□□□□□ -0.56
SRP54-213ENST00000556994 CNMDO75829 334 aa11.58□□□□□ -0.56
SRP54-213ENST00000556994 LGALS2P05162 132 aa11.58□□□□□ -0.56
SRP54-213ENST00000556994 HDCP19113 662 aa11.58□□□□□ -0.56
SRP54-213ENST00000556994 ZBTB17Q13105 803 aa11.58□□□□□ -0.56
SRP54-213ENST00000556994 ZFP1Q6P2D0 407 aa11.58□□□□□ -0.56
SRP54-213ENST00000556994 ZYG11AQ6WRX3 759 aa11.58□□□□□ -0.56
SRP54-213ENST00000556994 CTU1Q7Z7A3 348 aaKnown RBP11.58□□□□□ -0.56
SRP54-213ENST00000556994 SLC41A1Q8IVJ1 513 aa11.58□□□□□ -0.56
SRP54-213ENST00000556994 AHI1Q8N157 1196 aa11.58□□□□□ -0.56
SRP54-213ENST00000556994 FSTL5Q8N475 847 aaPredicted RBP11.58□□□□□ -0.56
SRP54-213ENST00000556994 TMEM102Q8N9M5 508 aaPredicted RBP11.58□□□□□ -0.56
SRP54-213ENST00000556994 C1QTNF1Q9BXJ1 281 aa11.58□□□□□ -0.56
SRP54-213ENST00000556994 EFCAB1Q9HAE3 211 aa11.58□□□□□ -0.56
SRP54-213ENST00000556994 PRDM16Q9HAZ2 1276 aa11.58□□□□□ -0.56
SRP54-213ENST00000556994 GOLGA2P5Q9HBQ8 144 aa11.58□□□□□ -0.56
SRP54-213ENST00000556994 ZBTB26Q9HCK0 441 aa11.58□□□□□ -0.56
SRP54-213ENST00000556994 KLK14Q9P0G3 267 aa11.58□□□□□ -0.56
SRP54-213ENST00000556994 HEMK1Q9Y5R4 338 aaPredicted RBP11.58□□□□□ -0.56
SRP54-213ENST00000556994 SNX10Q9Y5X0 201 aa11.58□□□□□ -0.56
SRP54-213ENST00000556994 CENPFP49454 3210 aa11.57□□□□□ -0.56
SRP54-213ENST00000556994 C7orf72A4D263 438 aa11.57□□□□□ -0.56
SRP54-213ENST00000556994 TCAF2A6NFQ2 919 aa11.57□□□□□ -0.56
SRP54-213ENST00000556994 KCNU1A8MYU2 1149 aa11.57□□□□□ -0.56
SRP54-213ENST00000556994 I6L893 689 aaPredicted RBP11.57□□□□□ -0.56
SRP54-213ENST00000556994 ACOT8O14734 319 aa11.57□□□□□ -0.56
SRP54-213ENST00000556994 DCLK1O15075 740 aa11.57□□□□□ -0.56
SRP54-213ENST00000556994 TIMM44O43615 452 aa11.57□□□□□ -0.56
SRP54-213ENST00000556994 DLX3O60479 287 aa11.57□□□□□ -0.56
SRP54-213ENST00000556994 BCAS2O75934 225 aaPredicted RBP11.57□□□□□ -0.56
SRP54-213ENST00000556994 TMCC1O94876 653 aa11.57□□□□□ -0.56
SRP54-213ENST00000556994 VAPBO95292 243 aa11.57□□□□□ -0.56
SRP54-213ENST00000556994 CYP2C8P10632 490 aa11.57□□□□□ -0.56
SRP54-213ENST00000556994 NFKB1P19838 968 aa11.57□□□□□ -0.56
SRP54-213ENST00000556994 GRM5P41594 1212 aa11.57□□□□□ -0.56
SRP54-213ENST00000556994 PAFAH1B3Q15102 231 aaKnown RBP11.57□□□□□ -0.56
SRP54-213ENST00000556994 ZNF484Q5JVG2 852 aa11.57□□□□□ -0.56
SRP54-213ENST00000556994 RPS27LQ71UM5 84 aaKnown RBP11.57□□□□□ -0.56
SRP54-213ENST00000556994 NPWQ8N729 165 aa11.57□□□□□ -0.56
SRP54-213ENST00000556994 EME1Q96AY2 570 aa11.57□□□□□ -0.56
SRP54-213ENST00000556994 ZNF512Q96ME7 567 aaPredicted RBP11.57□□□□□ -0.56
SRP54-213ENST00000556994 ZNF385DQ9H6B1 395 aa11.57□□□□□ -0.56
SRP54-213ENST00000556994 ZNF696Q9H7X3 374 aa11.57□□□□□ -0.56
SRP54-213ENST00000556994 CASS4Q9NQ75 786 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms