RNA–Protein interactions for RNA: ENST00000556907.1

PCNX4-213, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 495 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-213ENST00000556907 MYRIPQ8NFW9 859 aa16.79■□□□□ 0.28
PCNX4-213ENST00000556907 PCDH19Q8TAB3 1148 aa16.79■□□□□ 0.28
PCNX4-213ENST00000556907 GABRG3Q99928 467 aa16.79■□□□□ 0.28
PCNX4-213ENST00000556907 HEMGNQ9BXL5 484 aa16.79■□□□□ 0.28
PCNX4-213ENST00000556907 AP1M1Q9BXS5 423 aa16.79■□□□□ 0.28
PCNX4-213ENST00000556907 FRMD8P1Q9BZ68 369 aaPredicted RBP16.79■□□□□ 0.28
PCNX4-213ENST00000556907 HPCAL4Q9UM19 191 aa16.79■□□□□ 0.28
PCNX4-213ENST00000556907 SLC8A2Q9UPR5 921 aa16.79■□□□□ 0.28
PCNX4-213ENST00000556907 ZSCAN5CA6NGD5 496 aaPredicted RBP16.78■□□□□ 0.28
PCNX4-213ENST00000556907 APOC4-APOC2K7ER74 178 aa16.78■□□□□ 0.28
PCNX4-213ENST00000556907 APOL1O14791 398 aa16.78■□□□□ 0.28
PCNX4-213ENST00000556907 CST8O60676 142 aa16.78■□□□□ 0.28
PCNX4-213ENST00000556907 APOC2P02655 101 aa16.78■□□□□ 0.28
PCNX4-213ENST00000556907 ZFXP17010 805 aaPredicted RBP16.78■□□□□ 0.28
PCNX4-213ENST00000556907 MZF1P28698 734 aaPredicted RBP16.78■□□□□ 0.28
PCNX4-213ENST00000556907 HOXA6P31267 233 aa16.78■□□□□ 0.28
PCNX4-213ENST00000556907 SERPINB6P35237 376 aa16.78■□□□□ 0.28
PCNX4-213ENST00000556907 FNTAP49354 379 aa16.78■□□□□ 0.28
PCNX4-213ENST00000556907 DGKEP52429 567 aa16.78■□□□□ 0.28
PCNX4-213ENST00000556907 GEMIN4P57678 1058 aaKnown RBP16.78■□□□□ 0.28
PCNX4-213ENST00000556907 TUBB4BP68371 445 aa16.78■□□□□ 0.28
PCNX4-213ENST00000556907 ADCY2Q08462 1091 aa16.78■□□□□ 0.28
PCNX4-213ENST00000556907 EMC10Q5UCC4 262 aa16.78■□□□□ 0.28
PCNX4-213ENST00000556907 EGFLAMQ63HQ2 1017 aa16.78■□□□□ 0.28
PCNX4-213ENST00000556907 RETSATQ6NUM9 610 aa16.78■□□□□ 0.28
PCNX4-213ENST00000556907 ADAT2Q7Z6V5 191 aaKnown RBP16.78■□□□□ 0.28
PCNX4-213ENST00000556907 METTL3Q86U44 580 aaKnown RBP16.78■□□□□ 0.28
PCNX4-213ENST00000556907 SFTPA1Q8IWL2 248 aa16.78■□□□□ 0.28
PCNX4-213ENST00000556907 APCDD1Q8J025 514 aa16.78■□□□□ 0.28
PCNX4-213ENST00000556907 CAMKK1Q8N5S9 505 aa16.78■□□□□ 0.28
PCNX4-213ENST00000556907 PLD5Q8N7P1 536 aa16.78■□□□□ 0.28
PCNX4-213ENST00000556907 TTC13Q8NBP0 860 aa16.78■□□□□ 0.28
PCNX4-213ENST00000556907 NOA1Q8NC60 698 aaKnown RBP16.78■□□□□ 0.28
PCNX4-213ENST00000556907 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.78■□□□□ 0.28
PCNX4-213ENST00000556907 RUNDC3BQ96NL0 473 aa16.78■□□□□ 0.28
PCNX4-213ENST00000556907 ACE2Q9BYF1 805 aaPredicted RBP16.78■□□□□ 0.28
PCNX4-213ENST00000556907 HOMER3Q9NSC5 361 aa16.78■□□□□ 0.28
PCNX4-213ENST00000556907 SUN2Q9UH99 717 aa16.78■□□□□ 0.28
PCNX4-213ENST00000556907 SLC25A13Q9UJS0 675 aa16.78■□□□□ 0.28
PCNX4-213ENST00000556907 FBXO4Q9UKT5 387 aa16.78■□□□□ 0.28
PCNX4-213ENST00000556907 ATG2BQ96BY7 2078 aa16.77■□□□□ 0.28
PCNX4-213ENST00000556907 DCLK1O15075 740 aa16.77■□□□□ 0.28
PCNX4-213ENST00000556907 ZBTB24O43167 697 aaPredicted RBP16.77■□□□□ 0.28
PCNX4-213ENST00000556907 GALR2O43603 387 aaPredicted RBP16.77■□□□□ 0.28
PCNX4-213ENST00000556907 KLF8O95600 359 aaPredicted RBP16.77■□□□□ 0.28
PCNX4-213ENST00000556907 CHRNA3P32297 505 aa16.77■□□□□ 0.28
PCNX4-213ENST00000556907 CLCN6P51797 869 aa16.77■□□□□ 0.28
PCNX4-213ENST00000556907 ZNF234Q14588 700 aa16.77■□□□□ 0.28
PCNX4-213ENST00000556907 STARD3Q14849 445 aa16.77■□□□□ 0.28
PCNX4-213ENST00000556907 LLGL1Q15334 1064 aa16.77■□□□□ 0.28
PCNX4-213ENST00000556907 CRY1Q16526 586 aa16.77■□□□□ 0.28
PCNX4-213ENST00000556907 NCBP2-AS2Q69YL0 99 aa16.77■□□□□ 0.28
PCNX4-213ENST00000556907 DRICH1Q6PGQ1 229 aaPredicted RBP16.77■□□□□ 0.28
PCNX4-213ENST00000556907 TMCO3Q6UWJ1 677 aa16.77■□□□□ 0.28
PCNX4-213ENST00000556907 LRRC49Q8IUZ0 686 aa16.77■□□□□ 0.28
PCNX4-213ENST00000556907 ALLCQ8N6M5 410 aa16.77■□□□□ 0.28
PCNX4-213ENST00000556907 TXNDC5Q8NBS9 432 aaKnown RBP16.77■□□□□ 0.28
PCNX4-213ENST00000556907 OR52K2Q8NGK3 314 aa16.77■□□□□ 0.28
PCNX4-213ENST00000556907 ARHGEF2Q92974 986 aaKnown RBP16.77■□□□□ 0.28
PCNX4-213ENST00000556907 MAK16Q9BXY0 300 aaKnown RBP16.77■□□□□ 0.28
PCNX4-213ENST00000556907 FAM126AQ9BYI3 521 aaPredicted RBP16.77■□□□□ 0.28
PCNX4-213ENST00000556907 IRF2BPLQ9H1B7 796 aa16.77■□□□□ 0.28
PCNX4-213ENST00000556907 TMEM245Q9H330 911 aa16.77■□□□□ 0.28
PCNX4-213ENST00000556907 LRRC19Q9H756 370 aa16.77■□□□□ 0.28
PCNX4-213ENST00000556907 FBRSQ9HAH7 460 aa16.77■□□□□ 0.28
PCNX4-213ENST00000556907 ATP13A1Q9HD20 1204 aa16.77■□□□□ 0.28
PCNX4-213ENST00000556907 POLMQ9NP87 494 aaPredicted RBP16.77■□□□□ 0.28
PCNX4-213ENST00000556907 PRMT8Q9NR22 394 aaPredicted RBP16.77■□□□□ 0.28
PCNX4-213ENST00000556907 HCN2Q9UL51 889 aa16.77■□□□□ 0.28
PCNX4-213ENST00000556907 ERVW-1Q9UQF0 538 aa16.77■□□□□ 0.28
PCNX4-213ENST00000556907 R3HDM2Q9Y2K5 976 aaKnown RBP16.77■□□□□ 0.28
PCNX4-213ENST00000556907 STON1Q9Y6Q2 735 aa16.77■□□□□ 0.28
PCNX4-213ENST00000556907 KMT2EQ8IZD2 1858 aa16.77■□□□□ 0.27
PCNX4-213ENST00000556907 A0A0D9SEW6 157 aa16.76■□□□□ 0.27
PCNX4-213ENST00000556907 ARHGAP42A6NI28 874 aa16.76■□□□□ 0.27
PCNX4-213ENST00000556907 ALDH1A2O94788 518 aa16.76■□□□□ 0.27
PCNX4-213ENST00000556907 NRLP54845 237 aa16.76■□□□□ 0.27
PCNX4-213ENST00000556907 DYNLT1P63172 113 aa16.76■□□□□ 0.27
PCNX4-213ENST00000556907 NOMO1Q15155 1222 aa16.76■□□□□ 0.27
PCNX4-213ENST00000556907 PTPRNQ16849 979 aa16.76■□□□□ 0.27
PCNX4-213ENST00000556907 ZNF528Q3MIS6 628 aa16.76■□□□□ 0.27
PCNX4-213ENST00000556907 FNDC3BQ53EP0 1204 aaKnown RBP16.76■□□□□ 0.27
PCNX4-213ENST00000556907 TEX35Q5T0J7 233 aa16.76■□□□□ 0.27
PCNX4-213ENST00000556907 IL31Q6EBC2 164 aa16.76■□□□□ 0.27
PCNX4-213ENST00000556907 SERPINA13PQ6UXR4 307 aa16.76■□□□□ 0.27
PCNX4-213ENST00000556907 CASKIN2Q8WXE0 1202 aa16.76■□□□□ 0.27
PCNX4-213ENST00000556907 SPON2Q9BUD6 331 aa16.76■□□□□ 0.27
PCNX4-213ENST00000556907 DDX47Q9H0S4 455 aaKnown RBP16.76■□□□□ 0.27
PCNX4-213ENST00000556907 NDFIP2Q9NV92 336 aa16.76■□□□□ 0.27
PCNX4-213ENST00000556907 HS3ST2Q9Y278 367 aa16.76■□□□□ 0.27
PCNX4-213ENST00000556907 ZNF318Q5VUA4 2279 aa16.75■□□□□ 0.27
PCNX4-213ENST00000556907 ANKRD36A6QL64 1941 aa16.75■□□□□ 0.27
PCNX4-213ENST00000556907 CCDC163A0A0D9SF12 145 aa16.75■□□□□ 0.27
PCNX4-213ENST00000556907 TARSL2A2RTX5 802 aaKnown RBP16.75■□□□□ 0.27
PCNX4-213ENST00000556907 RASA4BC9J798 803 aa16.75■□□□□ 0.27
PCNX4-213ENST00000556907 SGK1O00141 431 aa16.75■□□□□ 0.27
PCNX4-213ENST00000556907 CTIFO43310 598 aaKnown RBP16.75■□□□□ 0.27
PCNX4-213ENST00000556907 RASA4O43374 803 aa16.75■□□□□ 0.27
PCNX4-213ENST00000556907 KDELR3O43731 214 aa16.75■□□□□ 0.27
PCNX4-213ENST00000556907 SYNCRIPO60506 623 aaKnown RBP16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms