RNA–Protein interactions for RNA: ENST00000556622.1

CPSF2-205, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 5

Gene CPSF2, Length 469 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-205ENST00000556622 FAM86C2PA6NEL3 165 aa6.3□□□□□ -1.4
CPSF2-205ENST00000556622 E7ESA3 106 aa6.3□□□□□ -1.4
CPSF2-205ENST00000556622 POC1B-GALNT4F8VUJ3 575 aa6.3□□□□□ -1.4
CPSF2-205ENST00000556622 KIAA0355O15063 1070 aa6.3□□□□□ -1.4
CPSF2-205ENST00000556622 XPOTO43592 962 aaKnown RBP6.3□□□□□ -1.4
CPSF2-205ENST00000556622 PRPSAP2O60256 369 aa6.3□□□□□ -1.4
CPSF2-205ENST00000556622 HBP1O60381 514 aa6.3□□□□□ -1.4
CPSF2-205ENST00000556622 EDF1O60869 148 aaKnown RBP6.3□□□□□ -1.4
CPSF2-205ENST00000556622 SNUPNO95149 360 aaKnown RBP6.3□□□□□ -1.4
CPSF2-205ENST00000556622 ASMTLO95671 621 aa6.3□□□□□ -1.4
CPSF2-205ENST00000556622 TIMP1P01033 207 aa6.3□□□□□ -1.4
CPSF2-205ENST00000556622 SYPP08247 313 aa6.3□□□□□ -1.4
CPSF2-205ENST00000556622 MMP3P08254 477 aa6.3□□□□□ -1.4
CPSF2-205ENST00000556622 MCF2P10911 925 aa6.3□□□□□ -1.4
CPSF2-205ENST00000556622 BMP7P18075 431 aa6.3□□□□□ -1.4
CPSF2-205ENST00000556622 GLDCP23378 1020 aa6.3□□□□□ -1.4
CPSF2-205ENST00000556622 GLRA2P23416 452 aa6.3□□□□□ -1.4
CPSF2-205ENST00000556622 MARK3P27448 753 aa6.3□□□□□ -1.4
CPSF2-205ENST00000556622 PTPN4P29074 926 aa6.3□□□□□ -1.4
CPSF2-205ENST00000556622 CDKN2BP42772 138 aa6.3□□□□□ -1.4
CPSF2-205ENST00000556622 MARCKSL1P49006 195 aa6.3□□□□□ -1.4
CPSF2-205ENST00000556622 ZNF135P52742 658 aaPredicted RBP6.3□□□□□ -1.4
CPSF2-205ENST00000556622 HK2P52789 917 aa6.3□□□□□ -1.4
CPSF2-205ENST00000556622 SP4Q02446 784 aa6.3□□□□□ -1.4
CPSF2-205ENST00000556622 ZBTB16Q05516 673 aa6.3□□□□□ -1.4
CPSF2-205ENST00000556622 PDIA2Q13087 525 aaKnown RBP6.3□□□□□ -1.4
CPSF2-205ENST00000556622 TMED2Q15363 201 aa6.3□□□□□ -1.4
CPSF2-205ENST00000556622 ZKSCAN8Q15776 578 aaPredicted RBP6.3□□□□□ -1.4
CPSF2-205ENST00000556622 UGCGQ16739 394 aa6.3□□□□□ -1.4
CPSF2-205ENST00000556622 FAM133BQ5BKY9 247 aaKnown RBP6.3□□□□□ -1.4
CPSF2-205ENST00000556622 ZNF484Q5JVG2 852 aa6.3□□□□□ -1.4
CPSF2-205ENST00000556622 RNASEH2BQ5TBB1 312 aaKnown RBP6.3□□□□□ -1.4
CPSF2-205ENST00000556622 CDCA2Q69YH5 1023 aaPredicted RBP6.3□□□□□ -1.4
CPSF2-205ENST00000556622 ZNF449Q6P9G9 518 aa6.3□□□□□ -1.4
CPSF2-205ENST00000556622 VSTM1Q6UX27 236 aa6.3□□□□□ -1.4
CPSF2-205ENST00000556622 C3orf62Q6ZUJ4 267 aa6.3□□□□□ -1.4
CPSF2-205ENST00000556622 PDZD4Q76G19 769 aaPredicted RBP6.3□□□□□ -1.4
CPSF2-205ENST00000556622 ARCQ7LC44 396 aa6.3□□□□□ -1.4
CPSF2-205ENST00000556622 CHSY1Q86X52 802 aa6.3□□□□□ -1.4
CPSF2-205ENST00000556622 PSTKQ8IV42 348 aaKnown RBP6.3□□□□□ -1.4
CPSF2-205ENST00000556622 CDKL3Q8IVW4 592 aaPredicted RBP6.3□□□□□ -1.4
CPSF2-205ENST00000556622 TMEM199Q8N511 208 aa6.3□□□□□ -1.4
CPSF2-205ENST00000556622 C7orf31Q8N865 590 aa6.3□□□□□ -1.4
CPSF2-205ENST00000556622 MAB21L3Q8N8X9 362 aa6.3□□□□□ -1.4
CPSF2-205ENST00000556622 SLC4A11Q8NBS3 891 aa6.3□□□□□ -1.4
CPSF2-205ENST00000556622 PPTC7Q8NI37 304 aa6.3□□□□□ -1.4
CPSF2-205ENST00000556622 GABPB2Q8TAK5 448 aaPredicted RBP6.3□□□□□ -1.4
CPSF2-205ENST00000556622 SLC35B2Q8TB61 432 aa6.3□□□□□ -1.4
CPSF2-205ENST00000556622 PLEKHO2Q8TD55 490 aa6.3□□□□□ -1.4
CPSF2-205ENST00000556622 TEKT4Q8WW24 435 aa6.3□□□□□ -1.4
CPSF2-205ENST00000556622 MAML1Q92585 1016 aa6.3□□□□□ -1.4
CPSF2-205ENST00000556622 KAT5Q92993 513 aa6.3□□□□□ -1.4
CPSF2-205ENST00000556622 STMN2Q93045 179 aa6.3□□□□□ -1.4
CPSF2-205ENST00000556622 MCUR1Q96AQ8 359 aa6.3□□□□□ -1.4
CPSF2-205ENST00000556622 MAP6Q96JE9 813 aa6.3□□□□□ -1.4
CPSF2-205ENST00000556622 CNPY3Q9BT09 278 aa6.3□□□□□ -1.4
CPSF2-205ENST00000556622 HEMGNQ9BXL5 484 aa6.3□□□□□ -1.4
CPSF2-205ENST00000556622 SLC12A9Q9BXP2 914 aa6.3□□□□□ -1.4
CPSF2-205ENST00000556622 TRPV6Q9H1D0 765 aa6.3□□□□□ -1.4
CPSF2-205ENST00000556622 CXorf56Q9H5V9 222 aa6.3□□□□□ -1.4
CPSF2-205ENST00000556622 BCAS3Q9H6U6 928 aa6.3□□□□□ -1.4
CPSF2-205ENST00000556622 PNPLA8Q9NP80 782 aa6.3□□□□□ -1.4
CPSF2-205ENST00000556622 TNFRSF10DQ9UBN6 386 aa6.3□□□□□ -1.4
CPSF2-205ENST00000556622 MCM8Q9UJA3 840 aa6.3□□□□□ -1.4
CPSF2-205ENST00000556622 ITGA11Q9UKX5 1188 aa6.3□□□□□ -1.4
CPSF2-205ENST00000556622 TNFSF13BQ9Y275 285 aa6.3□□□□□ -1.4
CPSF2-205ENST00000556622 DERAQ9Y315 318 aa6.3□□□□□ -1.4
CPSF2-205ENST00000556622 MKI67P46013 3256 aaKnown RBP6.3□□□□□ -1.4
CPSF2-205ENST00000556622 KIAA1217Q5T5P2 1943 aa6.3□□□□□ -1.4
CPSF2-205ENST00000556622 ALPK3Q96L96 1907 aa6.3□□□□□ -1.4
CPSF2-205ENST00000556622 UMODL1Q5DID0 1318 aa6.29□□□□□ -1.4
CPSF2-205ENST00000556622 GOLGA8QA0A0J9YX86 632 aa6.29□□□□□ -1.4
CPSF2-205ENST00000556622 GOLGA8OA6NCC3 632 aa6.29□□□□□ -1.4
CPSF2-205ENST00000556622 HACD1B0YJ81 288 aa6.29□□□□□ -1.4
CPSF2-205ENST00000556622 GOLGA8NF8WBI6 632 aa6.29□□□□□ -1.4
CPSF2-205ENST00000556622 BIRC5O15392 142 aa6.29□□□□□ -1.4
CPSF2-205ENST00000556622 LPXNO60711 386 aa6.29□□□□□ -1.4
CPSF2-205ENST00000556622 DNAJC6O75061 913 aa6.29□□□□□ -1.4
CPSF2-205ENST00000556622 ATP2C2O75185 946 aa6.29□□□□□ -1.4
CPSF2-205ENST00000556622 STBD1O95210 358 aa6.29□□□□□ -1.4
CPSF2-205ENST00000556622 ANP32DO95626 131 aa6.29□□□□□ -1.4
CPSF2-205ENST00000556622 IFNB1P01574 187 aa6.29□□□□□ -1.4
CPSF2-205ENST00000556622 CD4P01730 458 aa6.29□□□□□ -1.4
CPSF2-205ENST00000556622 TP53P04637 393 aaPredicted RBP6.29□□□□□ -1.4
CPSF2-205ENST00000556622 PRKCBP05771 671 aa6.29□□□□□ -1.4
CPSF2-205ENST00000556622 SNRPAP09012 282 aaKnown RBP6.29□□□□□ -1.4
CPSF2-205ENST00000556622 FAM163BP0C2L3 166 aa6.29□□□□□ -1.4
CPSF2-205ENST00000556622 MYL4P12829 197 aa6.29□□□□□ -1.4
CPSF2-205ENST00000556622 PECAM1P16284 738 aaPredicted RBP6.29□□□□□ -1.4
CPSF2-205ENST00000556622 KRT4P19013 534 aa6.29□□□□□ -1.4
CPSF2-205ENST00000556622 CD58P19256 250 aa6.29□□□□□ -1.4
CPSF2-205ENST00000556622 TAC1P20366 129 aa6.29□□□□□ -1.4
CPSF2-205ENST00000556622 UBA1P22314 1058 aaKnown RBP6.29□□□□□ -1.4
CPSF2-205ENST00000556622 CALB2P22676 271 aa6.29□□□□□ -1.4
CPSF2-205ENST00000556622 KDELR1P24390 212 aa6.29□□□□□ -1.4
CPSF2-205ENST00000556622 ITGB8P26012 769 aa6.29□□□□□ -1.4
CPSF2-205ENST00000556622 CYP2C18P33260 490 aa6.29□□□□□ -1.4
CPSF2-205ENST00000556622 ACADSBP45954 432 aa6.29□□□□□ -1.4
CPSF2-205ENST00000556622 GABRB2P47870 512 aa6.29□□□□□ -1.4
CPSF2-205ENST00000556622 ACOT2P49753 483 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms