RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 PPP1R9BQ96SB3 815 aa14.3□□□□□ -0.12
ACTN1-219ENST00000556432 IL12RB2Q99665 862 aa14.3□□□□□ -0.12
ACTN1-219ENST00000556432 SLC12A6Q9UHW9 1150 aa14.3□□□□□ -0.12
ACTN1-219ENST00000556432 CCDC187A0A096LP49 1063 aa14.29□□□□□ -0.12
ACTN1-219ENST00000556432 TCAF2A6NFQ2 919 aa14.29□□□□□ -0.12
ACTN1-219ENST00000556432 SART1O43290 800 aaKnown RBP14.29□□□□□ -0.12
ACTN1-219ENST00000556432 AQP9O43315 295 aa14.29□□□□□ -0.12
ACTN1-219ENST00000556432 TCEA3O75764 348 aa14.29□□□□□ -0.12
ACTN1-219ENST00000556432 FYNP06241 537 aa14.29□□□□□ -0.12
ACTN1-219ENST00000556432 ITGA2BP08514 1039 aa14.29□□□□□ -0.12
ACTN1-219ENST00000556432 FAM87AP0C7U9 286 aa14.29□□□□□ -0.12
ACTN1-219ENST00000556432 MLLT3P42568 568 aaPredicted RBP14.29□□□□□ -0.12
ACTN1-219ENST00000556432 SPIDRQ14159 915 aa14.29□□□□□ -0.12
ACTN1-219ENST00000556432 DRAP1Q14919 205 aaPredicted RBP14.29□□□□□ -0.12
ACTN1-219ENST00000556432 LINC00303Q3SY05 128 aa14.29□□□□□ -0.12
ACTN1-219ENST00000556432 CBWD6Q4V339 395 aa14.29□□□□□ -0.12
ACTN1-219ENST00000556432 CBWD3Q5JTY5 395 aa14.29□□□□□ -0.12
ACTN1-219ENST00000556432 CBWD5Q5RIA9 395 aa14.29□□□□□ -0.12
ACTN1-219ENST00000556432 TTC39BQ5VTQ0 682 aaPredicted RBP14.29□□□□□ -0.12
ACTN1-219ENST00000556432 SEL1L3Q68CR1 1132 aa14.29□□□□□ -0.12
ACTN1-219ENST00000556432 CLEC14AQ86T13 490 aa14.29□□□□□ -0.12
ACTN1-219ENST00000556432 PARGQ86W56 976 aa14.29□□□□□ -0.12
ACTN1-219ENST00000556432 DCP2Q8IU60 420 aaKnown RBP14.29□□□□□ -0.12
ACTN1-219ENST00000556432 ATP6V0D2Q8N8Y2 350 aa14.29□□□□□ -0.12
ACTN1-219ENST00000556432 GRIN3AQ8TCU5 1115 aa14.29□□□□□ -0.12
ACTN1-219ENST00000556432 SGF29Q96ES7 293 aa14.29□□□□□ -0.12
ACTN1-219ENST00000556432 HSFY1Q96LI6 401 aa14.29□□□□□ -0.12
ACTN1-219ENST00000556432 RPRD1AQ96P16 312 aaPredicted RBP14.29□□□□□ -0.12
ACTN1-219ENST00000556432 TRIM62Q9BVG3 475 aa14.29□□□□□ -0.12
ACTN1-219ENST00000556432 STARD5Q9NSY2 213 aa14.29□□□□□ -0.12
ACTN1-219ENST00000556432 PCDHB4Q9Y5E5 795 aa14.29□□□□□ -0.12
ACTN1-219ENST00000556432 KIF26BQ2KJY2 2108 aa14.29□□□□□ -0.12
ACTN1-219ENST00000556432 SYNJ2BP-COX16A0A087WUM0 186 aa14.28□□□□□ -0.12
ACTN1-219ENST00000556432 CETN3O15182 167 aa14.28□□□□□ -0.12
ACTN1-219ENST00000556432 MYL1P05976 194 aa14.28□□□□□ -0.12
ACTN1-219ENST00000556432 PAEPP09466 180 aa14.28□□□□□ -0.12
ACTN1-219ENST00000556432 NME1P15531 152 aaKnown RBP14.28□□□□□ -0.12
ACTN1-219ENST00000556432 JUNDP17535 347 aa14.28□□□□□ -0.12
ACTN1-219ENST00000556432 TBXAS1P24557 533 aaPredicted RBP14.28□□□□□ -0.12
ACTN1-219ENST00000556432 CHRNA3P32297 505 aa14.28□□□□□ -0.12
ACTN1-219ENST00000556432 RPIAP49247 311 aa14.28□□□□□ -0.12
ACTN1-219ENST00000556432 PLK1P53350 603 aa14.28□□□□□ -0.12
ACTN1-219ENST00000556432 CENPCQ03188 943 aa14.28□□□□□ -0.12
ACTN1-219ENST00000556432 FZD2Q14332 565 aa14.28□□□□□ -0.12
ACTN1-219ENST00000556432 PERM1Q5SV97 790 aa14.28□□□□□ -0.12
ACTN1-219ENST00000556432 SYPL2Q5VXT5 272 aa14.28□□□□□ -0.12
ACTN1-219ENST00000556432 CXorf57Q6NSI4 855 aaKnown RBP14.28□□□□□ -0.12
ACTN1-219ENST00000556432 XKR5Q6UX68 686 aa14.28□□□□□ -0.12
ACTN1-219ENST00000556432 GUF1Q8N442 669 aaKnown RBP14.28□□□□□ -0.12
ACTN1-219ENST00000556432 SH2D3CQ8N5H7 860 aa14.28□□□□□ -0.12
ACTN1-219ENST00000556432 ATP11CQ8NB49 1132 aa14.28□□□□□ -0.12
ACTN1-219ENST00000556432 FAM174AQ8TBP5 190 aa14.28□□□□□ -0.12
ACTN1-219ENST00000556432 GLMNQ92990 594 aa14.28□□□□□ -0.12
ACTN1-219ENST00000556432 MUC3BQ9H195 1237 aa14.28□□□□□ -0.12
ACTN1-219ENST00000556432 FAM204AQ9H8W3 233 aa14.28□□□□□ -0.12
ACTN1-219ENST00000556432 EPB41L5Q9HCM4 733 aa14.28□□□□□ -0.12
ACTN1-219ENST00000556432 COX16Q9P0S2 106 aa14.28□□□□□ -0.12
ACTN1-219ENST00000556432 SEPT3Q9UH03 358 aa14.28□□□□□ -0.12
ACTN1-219ENST00000556432 ZFR2Q9UPR6 939 aaKnown RBP14.28□□□□□ -0.12
ACTN1-219ENST00000556432 CSNK1G3Q9Y6M4 447 aa14.28□□□□□ -0.12
ACTN1-219ENST00000556432 LRRK2Q5S007 2527 aa14.28□□□□□ -0.12
ACTN1-219ENST00000556432 FLNCQ14315 2725 aa14.27□□□□□ -0.12
ACTN1-219ENST00000556432 EME2A4GXA9 379 aaPredicted RBP14.27□□□□□ -0.13
ACTN1-219ENST00000556432 POM121BA6NF01 834 aa14.27□□□□□ -0.13
ACTN1-219ENST00000556432 KCNU1A8MYU2 1149 aa14.27□□□□□ -0.13
ACTN1-219ENST00000556432 RIOK3O14730 519 aaKnown RBP14.27□□□□□ -0.13
ACTN1-219ENST00000556432 RHOBTB3O94955 611 aa14.27□□□□□ -0.13
ACTN1-219ENST00000556432 TRUB2O95900 331 aaKnown RBP14.27□□□□□ -0.13
ACTN1-219ENST00000556432 CALCAP01258 141 aa14.27□□□□□ -0.13
ACTN1-219ENST00000556432 CSF2P04141 144 aa14.27□□□□□ -0.13
ACTN1-219ENST00000556432 PRNPP04156 253 aa14.27□□□□□ -0.13
ACTN1-219ENST00000556432 ITGB2P05107 769 aa14.27□□□□□ -0.13
ACTN1-219ENST00000556432 CTSLP07711 333 aa14.27□□□□□ -0.13
ACTN1-219ENST00000556432 PFKFB1P16118 471 aa14.27□□□□□ -0.13
ACTN1-219ENST00000556432 SLC5A2P31639 672 aa14.27□□□□□ -0.13
ACTN1-219ENST00000556432 INHBCP55103 352 aa14.27□□□□□ -0.13
ACTN1-219ENST00000556432 STILQ15468 1287 aa14.27□□□□□ -0.13
ACTN1-219ENST00000556432 CNGA2Q16280 664 aa14.27□□□□□ -0.13
ACTN1-219ENST00000556432 KYAT3Q6YP21 454 aaKnown RBP14.27□□□□□ -0.13
ACTN1-219ENST00000556432 ERN2Q76MJ5 926 aaKnown RBP14.27□□□□□ -0.13
ACTN1-219ENST00000556432 C14orf80Q86SX3 495 aa14.27□□□□□ -0.13
ACTN1-219ENST00000556432 WDR48Q8TAF3 677 aa14.27□□□□□ -0.13
ACTN1-219ENST00000556432 NAT6Q93015 286 aa14.27□□□□□ -0.13
ACTN1-219ENST00000556432 FEM1AQ9BSK4 669 aa14.27□□□□□ -0.13
ACTN1-219ENST00000556432 ANKMY1Q9P2S6 941 aa14.27□□□□□ -0.13
ACTN1-219ENST00000556432 USP25Q9UHP3 1055 aa14.27□□□□□ -0.13
ACTN1-219ENST00000556432 SPTY2D1-AS1A0A0U1RR47 76 aa14.26□□□□□ -0.13
ACTN1-219ENST00000556432 A0A1B0GVL5 298 aa14.26□□□□□ -0.13
ACTN1-219ENST00000556432 PLD2O14939 933 aa14.26□□□□□ -0.13
ACTN1-219ENST00000556432 EFSO43281 561 aa14.26□□□□□ -0.13
ACTN1-219ENST00000556432 SUV39H1O43463 412 aa14.26□□□□□ -0.13
ACTN1-219ENST00000556432 PRR29P0C7W0 189 aa14.26□□□□□ -0.13
ACTN1-219ENST00000556432 SFTPCP11686 197 aa14.26□□□□□ -0.13
ACTN1-219ENST00000556432 RECQLP46063 649 aaPredicted RBP14.26□□□□□ -0.13
ACTN1-219ENST00000556432 RABIFP47224 123 aa14.26□□□□□ -0.13
ACTN1-219ENST00000556432 VASPP50552 380 aaPredicted RBP14.26□□□□□ -0.13
ACTN1-219ENST00000556432 PDE1CQ14123 709 aaPredicted RBP14.26□□□□□ -0.13
ACTN1-219ENST00000556432 TGIF1Q15583 401 aa14.26□□□□□ -0.13
ACTN1-219ENST00000556432 EDRF1Q3B7T1 1238 aa14.26□□□□□ -0.13
ACTN1-219ENST00000556432 ZCWPW2Q504Y3 356 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms