RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 ASCL5Q7RTU5 278 aa9.88□□□□□ -0.83
SRP54-210ENST00000556380 TMPRSS6Q8IU80 811 aa9.88□□□□□ -0.83
SRP54-210ENST00000556380 UMODL1-AS1Q8N2C9 162 aa9.88□□□□□ -0.83
SRP54-210ENST00000556380 DCAF4L2Q8NA75 395 aa9.88□□□□□ -0.83
SRP54-210ENST00000556380 SPC24Q8NBT2 197 aa9.88□□□□□ -0.83
SRP54-210ENST00000556380 OR2T3Q8NH03 318 aa9.88□□□□□ -0.83
SRP54-210ENST00000556380 TEKT4Q8WW24 435 aa9.88□□□□□ -0.83
SRP54-210ENST00000556380 RFFLQ8WZ73 363 aa9.88□□□□□ -0.83
SRP54-210ENST00000556380 TSC1Q92574 1164 aa9.88□□□□□ -0.83
SRP54-210ENST00000556380 PTPRN2Q92932 1015 aa9.88□□□□□ -0.83
SRP54-210ENST00000556380 ARHGEF2Q92974 986 aaKnown RBP9.88□□□□□ -0.83
SRP54-210ENST00000556380 ERLEC1Q96DZ1 483 aa9.88□□□□□ -0.83
SRP54-210ENST00000556380 FAM122AQ96E09 287 aa9.88□□□□□ -0.83
SRP54-210ENST00000556380 ZC3H10Q96K80 434 aaKnown RBP9.88□□□□□ -0.83
SRP54-210ENST00000556380 RPL10LQ96L21 214 aaKnown RBP9.88□□□□□ -0.83
SRP54-210ENST00000556380 MRGPRX2Q96LB1 330 aa9.88□□□□□ -0.83
SRP54-210ENST00000556380 FAM129BQ96TA1 746 aa9.88□□□□□ -0.83
SRP54-210ENST00000556380 TPSD1Q9BZJ3 242 aa9.88□□□□□ -0.83
SRP54-210ENST00000556380 MUC3BQ9H195 1237 aa9.88□□□□□ -0.83
SRP54-210ENST00000556380 SLC6A17Q9H1V8 727 aa9.88□□□□□ -0.83
SRP54-210ENST00000556380 MAGEH1Q9H213 219 aa9.88□□□□□ -0.83
SRP54-210ENST00000556380 LRRC19Q9H756 370 aa9.88□□□□□ -0.83
SRP54-210ENST00000556380 ITM2CQ9NQX7 267 aa9.88□□□□□ -0.83
SRP54-210ENST00000556380 CWC15Q9P013 229 aaKnown RBP9.88□□□□□ -0.83
SRP54-210ENST00000556380 DNAI1Q9UI46 699 aa9.88□□□□□ -0.83
SRP54-210ENST00000556380 LCMT1Q9UIC8 334 aa9.88□□□□□ -0.83
SRP54-210ENST00000556380 MBD1Q9UIS9 605 aaPredicted RBP9.88□□□□□ -0.83
SRP54-210ENST00000556380 VPS28Q9UK41 221 aa9.88□□□□□ -0.83
SRP54-210ENST00000556380 CEP250Q9BV73 2442 aa9.88□□□□□ -0.83
SRP54-210ENST00000556380 CKAP5Q14008 2032 aa9.88□□□□□ -0.83
SRP54-210ENST00000556380 ABCA7Q8IZY2 2146 aa9.88□□□□□ -0.83
SRP54-210ENST00000556380 CXorf51AA0A1B0GTR3 108 aa9.87□□□□□ -0.83
SRP54-210ENST00000556380 PRR23AA6NEV1 266 aa9.87□□□□□ -0.83
SRP54-210ENST00000556380 K7ERQ8 282 aa9.87□□□□□ -0.83
SRP54-210ENST00000556380 FGF10O15520 208 aaPredicted RBP9.87□□□□□ -0.83
SRP54-210ENST00000556380 SMAD6O43541 496 aaKnown RBP9.87□□□□□ -0.83
SRP54-210ENST00000556380 SIN3BO75182 1162 aa9.87□□□□□ -0.83
SRP54-210ENST00000556380 ZNF821O75541 412 aaPredicted RBP9.87□□□□□ -0.83
SRP54-210ENST00000556380 IGLV3-19P01714 112 aa9.87□□□□□ -0.83
SRP54-210ENST00000556380 LMNAP02545 664 aaKnown RBP9.87□□□□□ -0.83
SRP54-210ENST00000556380 SRCP12931 536 aa9.87□□□□□ -0.83
SRP54-210ENST00000556380 VAV1P15498 845 aa9.87□□□□□ -0.83
SRP54-210ENST00000556380 GOT1P17174 413 aa9.87□□□□□ -0.83
SRP54-210ENST00000556380 CYLC1P35663 651 aaPredicted RBP9.87□□□□□ -0.83
SRP54-210ENST00000556380 ARHGAP25P42331 645 aa9.87□□□□□ -0.83
SRP54-210ENST00000556380 ZNF135P52742 658 aaPredicted RBP9.87□□□□□ -0.83
SRP54-210ENST00000556380 ST8SIA6P61647 398 aa9.87□□□□□ -0.83
SRP54-210ENST00000556380 RPS14P62263 151 aaKnown RBP9.87□□□□□ -0.83
SRP54-210ENST00000556380 ARF5P84085 180 aa9.87□□□□□ -0.83
SRP54-210ENST00000556380 SLC20A2Q08357 652 aa9.87□□□□□ -0.83
SRP54-210ENST00000556380 SIM2Q14190 667 aaPredicted RBP9.87□□□□□ -0.83
SRP54-210ENST00000556380 DLG2Q15700 870 aa9.87□□□□□ -0.83
SRP54-210ENST00000556380 SMTNL2Q2TAL5 461 aa9.87□□□□□ -0.83
SRP54-210ENST00000556380 ATP13A4Q4VNC1 1196 aa9.87□□□□□ -0.83
SRP54-210ENST00000556380 AFMIDQ63HM1 303 aa9.87□□□□□ -0.83
SRP54-210ENST00000556380 POLNQ7Z5Q5 900 aa9.87□□□□□ -0.83
SRP54-210ENST00000556380 KBTBD6Q86V97 674 aa9.87□□□□□ -0.83
SRP54-210ENST00000556380 RETREG3Q86VR2 466 aa9.87□□□□□ -0.83
SRP54-210ENST00000556380 RHOT2Q8IXI1 618 aa9.87□□□□□ -0.83
SRP54-210ENST00000556380 SH2D3CQ8N5H7 860 aa9.87□□□□□ -0.83
SRP54-210ENST00000556380 FRMD1Q8N878 549 aa9.87□□□□□ -0.83
SRP54-210ENST00000556380 SNIP1Q8TAD8 396 aaKnown RBP9.87□□□□□ -0.83
SRP54-210ENST00000556380 RLN3Q8WXF3 142 aa9.87□□□□□ -0.83
SRP54-210ENST00000556380 NKD2Q969F2 451 aaPredicted RBP9.87□□□□□ -0.83
SRP54-210ENST00000556380 BAG1Q99933 345 aaPredicted RBP9.87□□□□□ -0.83
SRP54-210ENST00000556380 SPON2Q9BUD6 331 aa9.87□□□□□ -0.83
SRP54-210ENST00000556380 C2orf49Q9BVC5 232 aaPredicted RBP9.87□□□□□ -0.83
SRP54-210ENST00000556380 RSPH9Q9H1X1 276 aaPredicted RBP9.87□□□□□ -0.83
SRP54-210ENST00000556380 FBRSQ9HAH7 460 aa9.87□□□□□ -0.83
SRP54-210ENST00000556380 PRDM16Q9HAZ2 1276 aa9.87□□□□□ -0.83
SRP54-210ENST00000556380 PCDH18Q9HCL0 1135 aa9.87□□□□□ -0.83
SRP54-210ENST00000556380 CD93Q9NPY3 652 aa9.87□□□□□ -0.83
SRP54-210ENST00000556380 USP36Q9P275 1121 aaKnown RBP9.87□□□□□ -0.83
SRP54-210ENST00000556380 SALL4Q9UJQ4 1053 aa9.87□□□□□ -0.83
SRP54-210ENST00000556380 TFR2Q9UP52 801 aa9.87□□□□□ -0.83
SRP54-210ENST00000556380 INVSQ9Y283 1065 aa9.87□□□□□ -0.83
SRP54-210ENST00000556380 SPTBN4Q9H254 2564 aa9.87□□□□□ -0.83
SRP54-210ENST00000556380 A0A0A6YYK5 440 aaPredicted RBP9.86□□□□□ -0.83
SRP54-210ENST00000556380 EDDM13A0A1B0GTR0 161 aa9.86□□□□□ -0.83
SRP54-210ENST00000556380 RASA4BC9J798 803 aa9.86□□□□□ -0.83
SRP54-210ENST00000556380 EEF2KO00418 725 aaKnown RBP9.86□□□□□ -0.83
SRP54-210ENST00000556380 PJA2O43164 708 aa9.86□□□□□ -0.83
SRP54-210ENST00000556380 RASA4O43374 803 aa9.86□□□□□ -0.83
SRP54-210ENST00000556380 KDELR3O43731 214 aa9.86□□□□□ -0.83
SRP54-210ENST00000556380 RAMP2O60895 175 aa9.86□□□□□ -0.83
SRP54-210ENST00000556380 ERCC2P18074 760 aa9.86□□□□□ -0.83
SRP54-210ENST00000556380 BCKDHBP21953 392 aa9.86□□□□□ -0.83
SRP54-210ENST00000556380 NDST2P52849 883 aa9.86□□□□□ -0.83
SRP54-210ENST00000556380 YBEYP58557 167 aaPredicted RBP9.86□□□□□ -0.83
SRP54-210ENST00000556380 TPI1P60174 286 aa9.86□□□□□ -0.83
SRP54-210ENST00000556380 KRT83P78385 493 aa9.86□□□□□ -0.83
SRP54-210ENST00000556380 ZBTB16Q05516 673 aa9.86□□□□□ -0.83
SRP54-210ENST00000556380 MESDQ14696 234 aa9.86□□□□□ -0.83
SRP54-210ENST00000556380 POLD3Q15054 466 aaPredicted RBP9.86□□□□□ -0.83
SRP54-210ENST00000556380 SPA17Q15506 151 aa9.86□□□□□ -0.83
SRP54-210ENST00000556380 PLK5Q496M5 336 aa9.86□□□□□ -0.83
SRP54-210ENST00000556380 PPP6R3Q5H9R7 873 aaPredicted RBP9.86□□□□□ -0.83
SRP54-210ENST00000556380 LINGO4Q6UY18 593 aa9.86□□□□□ -0.83
SRP54-210ENST00000556380 ARHGAP12Q8IWW6 846 aa9.86□□□□□ -0.83
SRP54-210ENST00000556380 PGBD3Q8N328 593 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms