RNA–Protein interactions for RNA: ENST00000556375.5

SLIRP-206, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-206ENST00000556375 IL31Q6EBC2 164 aa11.79□□□□□ -0.52
SLIRP-206ENST00000556375 SLC23A3Q6PIS1 610 aa11.79□□□□□ -0.52
SLIRP-206ENST00000556375 LINGO4Q6UY18 593 aa11.79□□□□□ -0.52
SLIRP-206ENST00000556375 PSTKQ8IV42 348 aaKnown RBP11.79□□□□□ -0.52
SLIRP-206ENST00000556375 ARFGAP1Q8N6T3 406 aa11.79□□□□□ -0.52
SLIRP-206ENST00000556375 CEP76Q8TAP6 659 aa11.79□□□□□ -0.52
SLIRP-206ENST00000556375 DNASE2BQ8WZ79 361 aa11.79□□□□□ -0.52
SLIRP-206ENST00000556375 PEBP4Q96S96 227 aa11.79□□□□□ -0.52
SLIRP-206ENST00000556375 RTKNQ9BST9 563 aa11.79□□□□□ -0.52
SLIRP-206ENST00000556375 SNRNP25Q9BV90 132 aaKnown RBP11.79□□□□□ -0.52
SLIRP-206ENST00000556375 NUSAP1Q9BXS6 441 aaKnown RBP11.79□□□□□ -0.52
SLIRP-206ENST00000556375 CEP44Q9C0F1 390 aa11.79□□□□□ -0.52
SLIRP-206ENST00000556375 MAGEH1Q9H213 219 aa11.79□□□□□ -0.52
SLIRP-206ENST00000556375 CATSPERBQ9H7T0 1116 aa11.79□□□□□ -0.52
SLIRP-206ENST00000556375 RXFP3Q9NSD7 469 aa11.79□□□□□ -0.52
SLIRP-206ENST00000556375 ABHD10Q9NUJ1 306 aa11.79□□□□□ -0.52
SLIRP-206ENST00000556375 ZNHIT6Q9NWK9 470 aaKnown RBP11.79□□□□□ -0.52
SLIRP-206ENST00000556375 FBXL12Q9NXK8 326 aa11.79□□□□□ -0.52
SLIRP-206ENST00000556375 SERGEFQ9UGK8 458 aa11.79□□□□□ -0.52
SLIRP-206ENST00000556375 DNAI1Q9UI46 699 aa11.79□□□□□ -0.52
SLIRP-206ENST00000556375 NCKAP1Q9Y2A7 1128 aa11.79□□□□□ -0.52
SLIRP-206ENST00000556375 TP53BP1Q12888 1972 aaPredicted RBP11.79□□□□□ -0.52
SLIRP-206ENST00000556375 PLXNA2O75051 1894 aa11.78□□□□□ -0.52
SLIRP-206ENST00000556375 CNOT1A5YKK6 2376 aaKnown RBP11.78□□□□□ -0.52
SLIRP-206ENST00000556375 A0A1W2PP55 124 aa11.78□□□□□ -0.52
SLIRP-206ENST00000556375 SSU72P8A0A1W2PR75 194 aa11.78□□□□□ -0.52
SLIRP-206ENST00000556375 METTL12A8MUP2 240 aa11.78□□□□□ -0.52
SLIRP-206ENST00000556375 WASH4PA8MWX3 477 aa11.78□□□□□ -0.52
SLIRP-206ENST00000556375 C1QTNF3-AMACRE9PGA6 284 aa11.78□□□□□ -0.52
SLIRP-206ENST00000556375 K7ERQ8 282 aa11.78□□□□□ -0.52
SLIRP-206ENST00000556375 MCF2LO15068 1137 aa11.78□□□□□ -0.52
SLIRP-206ENST00000556375 SMAD6O43541 496 aaKnown RBP11.78□□□□□ -0.52
SLIRP-206ENST00000556375 RNASEH2AO75792 299 aaKnown RBP11.78□□□□□ -0.52
SLIRP-206ENST00000556375 CFIP05156 583 aa11.78□□□□□ -0.52
SLIRP-206ENST00000556375 CYP1A2P05177 515 aa11.78□□□□□ -0.52
SLIRP-206ENST00000556375 MIPP30301 263 aa11.78□□□□□ -0.52
SLIRP-206ENST00000556375 PCK1P35558 622 aa11.78□□□□□ -0.52
SLIRP-206ENST00000556375 ACVRL1P37023 503 aa11.78□□□□□ -0.52
SLIRP-206ENST00000556375 GEMIN4P57678 1058 aaKnown RBP11.78□□□□□ -0.52
SLIRP-206ENST00000556375 TPI1P60174 286 aa11.78□□□□□ -0.52
SLIRP-206ENST00000556375 ARF5P84085 180 aa11.78□□□□□ -0.52
SLIRP-206ENST00000556375 SLC18A3Q16572 532 aa11.78□□□□□ -0.52
SLIRP-206ENST00000556375 TSR1Q2NL82 804 aaKnown RBP11.78□□□□□ -0.52
SLIRP-206ENST00000556375 ERMARDQ5T6L9 678 aa11.78□□□□□ -0.52
SLIRP-206ENST00000556375 DCAF12L1Q5VU92 463 aa11.78□□□□□ -0.52
SLIRP-206ENST00000556375 FAM46CQ5VWP2 391 aa11.78□□□□□ -0.52
SLIRP-206ENST00000556375 CYP4V2Q6ZWL3 525 aaPredicted RBP11.78□□□□□ -0.52
SLIRP-206ENST00000556375 CNGA4Q8IV77 575 aa11.78□□□□□ -0.52
SLIRP-206ENST00000556375 RGL4Q8IZJ4 473 aa11.78□□□□□ -0.52
SLIRP-206ENST00000556375 AADATQ8N5Z0 425 aa11.78□□□□□ -0.52
SLIRP-206ENST00000556375 PCDH20Q8N6Y1 951 aaKnown RBP11.78□□□□□ -0.52
SLIRP-206ENST00000556375 NIPA2Q8N8Q9 360 aa11.78□□□□□ -0.52
SLIRP-206ENST00000556375 OR2A12Q8NGT7 310 aa11.78□□□□□ -0.52
SLIRP-206ENST00000556375 GANCQ8TET4 914 aa11.78□□□□□ -0.52
SLIRP-206ENST00000556375 ARHGEF2Q92974 986 aaKnown RBP11.78□□□□□ -0.52
SLIRP-206ENST00000556375 OMDQ99983 421 aa11.78□□□□□ -0.52
SLIRP-206ENST00000556375 NUP85Q9BW27 656 aa11.78□□□□□ -0.52
SLIRP-206ENST00000556375 DHX35Q9H5Z1 703 aaKnown RBP11.78□□□□□ -0.52
SLIRP-206ENST00000556375 C6orf106Q9H6K1 298 aaPredicted RBP11.78□□□□□ -0.52
SLIRP-206ENST00000556375 CAPN10Q9HC96 672 aa11.78□□□□□ -0.52
SLIRP-206ENST00000556375 GPATCH2LQ9NWQ4 482 aa11.78□□□□□ -0.52
SLIRP-206ENST00000556375 DONSONQ9NYP3 566 aa11.78□□□□□ -0.52
SLIRP-206ENST00000556375 PCSK1NQ9UHG2 260 aa11.78□□□□□ -0.52
SLIRP-206ENST00000556375 ANAPC7Q9UJX3 599 aa11.78□□□□□ -0.52
SLIRP-206ENST00000556375 SLC6A14Q9UN76 642 aa11.78□□□□□ -0.52
SLIRP-206ENST00000556375 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.78□□□□□ -0.52
SLIRP-206ENST00000556375 FARP1Q9Y4F1 1045 aaPredicted RBP11.78□□□□□ -0.52
SLIRP-206ENST00000556375 ZSCAN5CA6NGD5 496 aaPredicted RBP11.77□□□□□ -0.53
SLIRP-206ENST00000556375 BNIP3LO60238 219 aa11.77□□□□□ -0.53
SLIRP-206ENST00000556375 SERPINF2P08697 491 aa11.77□□□□□ -0.53
SLIRP-206ENST00000556375 GNSP15586 552 aa11.77□□□□□ -0.53
SLIRP-206ENST00000556375 GOT1P17174 413 aa11.77□□□□□ -0.53
SLIRP-206ENST00000556375 DRD3P35462 400 aa11.77□□□□□ -0.53
SLIRP-206ENST00000556375 RECQLP46063 649 aaPredicted RBP11.77□□□□□ -0.53
SLIRP-206ENST00000556375 ZNF135P52742 658 aaPredicted RBP11.77□□□□□ -0.53
SLIRP-206ENST00000556375 GALCP54803 685 aa11.77□□□□□ -0.53
SLIRP-206ENST00000556375 YBEYP58557 167 aaPredicted RBP11.77□□□□□ -0.53
SLIRP-206ENST00000556375 IRX4P78413 519 aa11.77□□□□□ -0.53
SLIRP-206ENST00000556375 GFPT1Q06210 699 aaPredicted RBP11.77□□□□□ -0.53
SLIRP-206ENST00000556375 TBX2Q13207 712 aaPredicted RBP11.77□□□□□ -0.53
SLIRP-206ENST00000556375 PIGHQ14442 188 aaPredicted RBP11.77□□□□□ -0.53
SLIRP-206ENST00000556375 POLD3Q15054 466 aaPredicted RBP11.77□□□□□ -0.53
SLIRP-206ENST00000556375 CA9Q16790 459 aa11.77□□□□□ -0.53
SLIRP-206ENST00000556375 ASTE1Q2TB18 679 aaPredicted RBP11.77□□□□□ -0.53
SLIRP-206ENST00000556375 PARP15Q460N3 678 aa11.77□□□□□ -0.53
SLIRP-206ENST00000556375 STPG1Q5TH74 334 aa11.77□□□□□ -0.53
SLIRP-206ENST00000556375 UMODL1-AS1Q8N2C9 162 aa11.77□□□□□ -0.53
SLIRP-206ENST00000556375 HDDC3Q8N4P3 179 aa11.77□□□□□ -0.53
SLIRP-206ENST00000556375 ZCCHC9Q8N567 271 aaKnown RBP11.77□□□□□ -0.53
SLIRP-206ENST00000556375 PIP4K2CQ8TBX8 421 aa11.77□□□□□ -0.53
SLIRP-206ENST00000556375 FAM131CQ96AQ9 280 aa11.77□□□□□ -0.53
SLIRP-206ENST00000556375 ARHGEF26Q96DR7 871 aa11.77□□□□□ -0.53
SLIRP-206ENST00000556375 KCTD15Q96SI1 283 aaPredicted RBP11.77□□□□□ -0.53
SLIRP-206ENST00000556375 TRIM5Q9C035 493 aa11.77□□□□□ -0.53
SLIRP-206ENST00000556375 DEF6Q9H4E7 631 aa11.77□□□□□ -0.53
SLIRP-206ENST00000556375 NOL6Q9H6R4 1146 aaKnown RBP11.77□□□□□ -0.53
SLIRP-206ENST00000556375 TMEM9BQ9NQ34 198 aa11.77□□□□□ -0.53
SLIRP-206ENST00000556375 IP6K2Q9UHH9 426 aa11.77□□□□□ -0.53
SLIRP-206ENST00000556375 SARDHQ9UL12 918 aa11.77□□□□□ -0.53
SLIRP-206ENST00000556375 PPM1HQ9ULR3 514 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms