RNA–Protein interactions for RNA: ENST00000556284.1

MTHFD1-213, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 5

Gene MTHFD1, Length 932 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-213ENST00000556284 SMARCAL1Q9NZC9 954 aa10.27□□□□□ -0.77
MTHFD1-213ENST00000556284 SAE1Q9UBE0 346 aaPredicted RBP10.27□□□□□ -0.77
MTHFD1-213ENST00000556284 FEZ2Q9UHY8 353 aaPredicted RBP10.27□□□□□ -0.77
MTHFD1-213ENST00000556284 IPO11Q9UI26 975 aaKnown RBP10.27□□□□□ -0.77
MTHFD1-213ENST00000556284 VPS28Q9UK41 221 aa10.27□□□□□ -0.77
MTHFD1-213ENST00000556284 DUSP12Q9UNI6 340 aa10.27□□□□□ -0.77
MTHFD1-213ENST00000556284 DRG1Q9Y295 367 aaKnown RBP10.27□□□□□ -0.77
MTHFD1-213ENST00000556284 PIAS3Q9Y6X2 628 aa10.27□□□□□ -0.77
MTHFD1-213ENST00000556284 KIF26AQ9ULI4 1882 aaPredicted RBP10.26□□□□□ -0.77
MTHFD1-213ENST00000556284 BCLAF3A2AJT9 711 aaKnown RBP10.26□□□□□ -0.77
MTHFD1-213ENST00000556284 CFAP69A5D8W1 941 aa10.26□□□□□ -0.77
MTHFD1-213ENST00000556284 SPECC1L-ADORA2AF8WAN1 911 aa10.26□□□□□ -0.77
MTHFD1-213ENST00000556284 H7C0C1 242 aa10.26□□□□□ -0.77
MTHFD1-213ENST00000556284 MTSS1O43312 755 aa10.26□□□□□ -0.77
MTHFD1-213ENST00000556284 NARSO43776 548 aaKnown RBP10.26□□□□□ -0.77
MTHFD1-213ENST00000556284 MAFKO60675 156 aa10.26□□□□□ -0.77
MTHFD1-213ENST00000556284 PRAMEF11O60813 436 aa10.26□□□□□ -0.77
MTHFD1-213ENST00000556284 ITGAVP06756 1048 aa10.26□□□□□ -0.77
MTHFD1-213ENST00000556284 RBP3P10745 1247 aa10.26□□□□□ -0.77
MTHFD1-213ENST00000556284 STIP1P31948 543 aaKnown RBP10.26□□□□□ -0.77
MTHFD1-213ENST00000556284 CHRNA3P32297 505 aa10.26□□□□□ -0.77
MTHFD1-213ENST00000556284 CTHP32929 405 aa10.26□□□□□ -0.77
MTHFD1-213ENST00000556284 ATP5OP48047 213 aa10.26□□□□□ -0.77
MTHFD1-213ENST00000556284 FNTAP49354 379 aa10.26□□□□□ -0.77
MTHFD1-213ENST00000556284 GEMIN4P57678 1058 aaKnown RBP10.26□□□□□ -0.77
MTHFD1-213ENST00000556284 LMNB2Q03252 620 aa10.26□□□□□ -0.77
MTHFD1-213ENST00000556284 IL10RBQ08334 325 aa10.26□□□□□ -0.77
MTHFD1-213ENST00000556284 SLC20A2Q08357 652 aa10.26□□□□□ -0.77
MTHFD1-213ENST00000556284 PPIDQ08752 370 aaKnown RBP10.26□□□□□ -0.77
MTHFD1-213ENST00000556284 EIF4HQ15056 248 aaKnown RBP10.26□□□□□ -0.77
MTHFD1-213ENST00000556284 E2F5Q15329 346 aa10.26□□□□□ -0.77
MTHFD1-213ENST00000556284 SLC44A4Q53GD3 710 aa10.26□□□□□ -0.77
MTHFD1-213ENST00000556284 SLC45A4Q5BKX6 768 aa10.26□□□□□ -0.77
MTHFD1-213ENST00000556284 PITRM1Q5JRX3 1037 aa10.26□□□□□ -0.77
MTHFD1-213ENST00000556284 TMCO4Q5TGY1 634 aa10.26□□□□□ -0.77
MTHFD1-213ENST00000556284 TIGD7Q6NT04 549 aaPredicted RBP10.26□□□□□ -0.77
MTHFD1-213ENST00000556284 DARS2Q6PI48 645 aaKnown RBP10.26□□□□□ -0.77
MTHFD1-213ENST00000556284 ZC3H18Q86VM9 953 aaKnown RBP10.26□□□□□ -0.77
MTHFD1-213ENST00000556284 C12orf40Q86WS4 652 aa10.26□□□□□ -0.77
MTHFD1-213ENST00000556284 ZNF354CQ86Y25 554 aa10.26□□□□□ -0.77
MTHFD1-213ENST00000556284 RNF135Q8IUD6 432 aa10.26□□□□□ -0.77
MTHFD1-213ENST00000556284 CDKL3Q8IVW4 592 aaPredicted RBP10.26□□□□□ -0.77
MTHFD1-213ENST00000556284 TP53INP2Q8IXH6 220 aa10.26□□□□□ -0.77
MTHFD1-213ENST00000556284 CCDC13Q8IYE1 715 aa10.26□□□□□ -0.77
MTHFD1-213ENST00000556284 UBALD2Q8IYN6 164 aa10.26□□□□□ -0.77
MTHFD1-213ENST00000556284 GJD3Q8N144 294 aa10.26□□□□□ -0.77
MTHFD1-213ENST00000556284 PHTF2Q8N3S3 785 aa10.26□□□□□ -0.77
MTHFD1-213ENST00000556284 CEP112Q8N8E3 955 aa10.26□□□□□ -0.77
MTHFD1-213ENST00000556284 DCAF4L2Q8NA75 395 aa10.26□□□□□ -0.77
MTHFD1-213ENST00000556284 CCNYQ8ND76 341 aa10.26□□□□□ -0.77
MTHFD1-213ENST00000556284 SPATA4Q8NEY3 305 aa10.26□□□□□ -0.77
MTHFD1-213ENST00000556284 ATL2Q8NHH9 583 aa10.26□□□□□ -0.77
MTHFD1-213ENST00000556284 TTC17Q96AE7 1141 aa10.26□□□□□ -0.77
MTHFD1-213ENST00000556284 RUNDC3BQ96NL0 473 aa10.26□□□□□ -0.77
MTHFD1-213ENST00000556284 ZNF599Q96NL3 588 aa10.26□□□□□ -0.77
MTHFD1-213ENST00000556284 QKIQ96PU8 341 aaKnown RBP eCLIP10.26□□□□□ -0.77
MTHFD1-213ENST00000556284 LGMNQ99538 433 aa10.26□□□□□ -0.77
MTHFD1-213ENST00000556284 P2RY13Q9BPV8 354 aa10.26□□□□□ -0.77
MTHFD1-213ENST00000556284 FERMT1Q9BQL6 677 aa10.26□□□□□ -0.77
MTHFD1-213ENST00000556284 EVA1BQ9NVM1 165 aa10.26□□□□□ -0.77
MTHFD1-213ENST00000556284 DNPEPQ9ULA0 475 aa10.26□□□□□ -0.77
MTHFD1-213ENST00000556284 DOCK4Q8N1I0 1966 aa10.26□□□□□ -0.77
MTHFD1-213ENST00000556284 TBC1D3BA6NDS4 549 aa10.25□□□□□ -0.77
MTHFD1-213ENST00000556284 CBX4O00257 560 aa10.25□□□□□ -0.77
MTHFD1-213ENST00000556284 MAN2B1O00754 1011 aa10.25□□□□□ -0.77
MTHFD1-213ENST00000556284 MATN3O15232 486 aa10.25□□□□□ -0.77
MTHFD1-213ENST00000556284 PHF2O75151 1096 aa10.25□□□□□ -0.77
MTHFD1-213ENST00000556284 ZMPSTE24O75844 475 aa10.25□□□□□ -0.77
MTHFD1-213ENST00000556284 KAT7O95251 611 aa10.25□□□□□ -0.77
MTHFD1-213ENST00000556284 MAP3K6O95382 1288 aa10.25□□□□□ -0.77
MTHFD1-213ENST00000556284 F12P00748 615 aaPredicted RBP10.25□□□□□ -0.77
MTHFD1-213ENST00000556284 ASLP04424 464 aa10.25□□□□□ -0.77
MTHFD1-213ENST00000556284 APODP05090 189 aa10.25□□□□□ -0.77
MTHFD1-213ENST00000556284 ATP5BP06576 529 aaKnown RBP10.25□□□□□ -0.77
MTHFD1-213ENST00000556284 POLR2EP19388 210 aaKnown RBP10.25□□□□□ -0.77
MTHFD1-213ENST00000556284 COILP38432 576 aaPredicted RBP10.25□□□□□ -0.77
MTHFD1-213ENST00000556284 TNFRSF4P43489 277 aa10.25□□□□□ -0.77
MTHFD1-213ENST00000556284 SOX9P48436 509 aa10.25□□□□□ -0.77
MTHFD1-213ENST00000556284 GALK1P51570 392 aa10.25□□□□□ -0.77
MTHFD1-213ENST00000556284 AP1B1Q10567 949 aa10.25□□□□□ -0.77
MTHFD1-213ENST00000556284 RFTN1Q14699 578 aaPredicted RBP10.25□□□□□ -0.77
MTHFD1-213ENST00000556284 PRKD1Q15139 912 aaPredicted RBP10.25□□□□□ -0.77
MTHFD1-213ENST00000556284 OASLQ15646 514 aaKnown RBP10.25□□□□□ -0.77
MTHFD1-213ENST00000556284 GEN1Q17RS7 908 aa10.25□□□□□ -0.77
MTHFD1-213ENST00000556284 FUT11Q495W5 492 aa10.25□□□□□ -0.77
MTHFD1-213ENST00000556284 MBLAC2Q68D91 279 aa10.25□□□□□ -0.77
MTHFD1-213ENST00000556284 RETSATQ6NUM9 610 aa10.25□□□□□ -0.77
MTHFD1-213ENST00000556284 ADIPOR2Q86V24 386 aa10.25□□□□□ -0.77
MTHFD1-213ENST00000556284 APCDD1Q8J025 514 aa10.25□□□□□ -0.77
MTHFD1-213ENST00000556284 TERB1Q8NA31 727 aa10.25□□□□□ -0.77
MTHFD1-213ENST00000556284 NETO2Q8NC67 525 aa10.25□□□□□ -0.77
MTHFD1-213ENST00000556284 NSMCE1Q8WV22 266 aa10.25□□□□□ -0.77
MTHFD1-213ENST00000556284 HTR3CQ8WXA8 447 aa10.25□□□□□ -0.77
MTHFD1-213ENST00000556284 CASKIN2Q8WXE0 1202 aa10.25□□□□□ -0.77
MTHFD1-213ENST00000556284 ATG4AQ8WYN0 398 aa10.25□□□□□ -0.77
MTHFD1-213ENST00000556284 CHFRQ96EP1 664 aa10.25□□□□□ -0.77
MTHFD1-213ENST00000556284 FAM118BQ9BPY3 351 aa10.25□□□□□ -0.77
MTHFD1-213ENST00000556284 SP110Q9HB58 689 aa10.25□□□□□ -0.77
MTHFD1-213ENST00000556284 USP29Q9HBJ7 922 aa10.25□□□□□ -0.77
MTHFD1-213ENST00000556284 HEBP1Q9NRV9 189 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms