RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 A0A1W2PPZ6 126 aa7.03□□□□□ -1.28
SLIRP-204ENST00000555890 BLACEA4D250 179 aa7.03□□□□□ -1.28
SLIRP-204ENST00000555890 ZNF487B1APH4 448 aa7.03□□□□□ -1.28
SLIRP-204ENST00000555890 C2CD4DB7Z1M9 353 aa7.03□□□□□ -1.28
SLIRP-204ENST00000555890 I3L4J1 428 aa7.03□□□□□ -1.28
SLIRP-204ENST00000555890 APOC4-APOC2K7ER74 178 aa7.03□□□□□ -1.28
SLIRP-204ENST00000555890 SGK1O00141 431 aa7.03□□□□□ -1.28
SLIRP-204ENST00000555890 APOL1O14791 398 aa7.03□□□□□ -1.28
SLIRP-204ENST00000555890 MCF2LO15068 1137 aa7.03□□□□□ -1.28
SLIRP-204ENST00000555890 PDPK1O15530 556 aa7.03□□□□□ -1.28
SLIRP-204ENST00000555890 PPFIA2O75334 1257 aa7.03□□□□□ -1.28
SLIRP-204ENST00000555890 TADA2AO75478 443 aa7.03□□□□□ -1.28
SLIRP-204ENST00000555890 SYF2O95926 243 aaKnown RBP7.03□□□□□ -1.28
SLIRP-204ENST00000555890 F9P00740 461 aa7.03□□□□□ -1.28
SLIRP-204ENST00000555890 APOC2P02655 101 aa7.03□□□□□ -1.28
SLIRP-204ENST00000555890 ALDH2P05091 517 aa7.03□□□□□ -1.28
SLIRP-204ENST00000555890 IMPDH2P12268 514 aa7.03□□□□□ -1.28
SLIRP-204ENST00000555890 ACPPP15309 386 aa7.03□□□□□ -1.28
SLIRP-204ENST00000555890 ZFXP17010 805 aaPredicted RBP7.03□□□□□ -1.28
SLIRP-204ENST00000555890 NFKB1P19838 968 aa7.03□□□□□ -1.28
SLIRP-204ENST00000555890 TGM2P21980 687 aa7.03□□□□□ -1.28
SLIRP-204ENST00000555890 HSD17B3P37058 310 aa7.03□□□□□ -1.28
SLIRP-204ENST00000555890 OR1G1P47890 313 aa7.03□□□□□ -1.28
SLIRP-204ENST00000555890 SULT1E1P49888 294 aa7.03□□□□□ -1.28
SLIRP-204ENST00000555890 PMS2P54278 862 aa7.03□□□□□ -1.28
SLIRP-204ENST00000555890 EIF3BP55884 814 aaKnown RBP7.03□□□□□ -1.28
SLIRP-204ENST00000555890 HDAC4P56524 1084 aa7.03□□□□□ -1.28
SLIRP-204ENST00000555890 DYNLT1P63172 113 aa7.03□□□□□ -1.28
SLIRP-204ENST00000555890 OTUD4Q01804 1114 aaKnown RBP7.03□□□□□ -1.28
SLIRP-204ENST00000555890 YWHAHQ04917 246 aaPredicted RBP7.03□□□□□ -1.28
SLIRP-204ENST00000555890 DSC1Q08554 894 aa7.03□□□□□ -1.28
SLIRP-204ENST00000555890 MPP2Q14168 576 aa7.03□□□□□ -1.28
SLIRP-204ENST00000555890 SLC25A52Q3SY17 297 aa7.03□□□□□ -1.28
SLIRP-204ENST00000555890 PAN2Q504Q3 1202 aaKnown RBP7.03□□□□□ -1.28
SLIRP-204ENST00000555890 CLLU1OSQ5K130 101 aa7.03□□□□□ -1.28
SLIRP-204ENST00000555890 TRNP1Q6NT89 227 aa7.03□□□□□ -1.28
SLIRP-204ENST00000555890 FAM171BQ6P995 826 aa7.03□□□□□ -1.28
SLIRP-204ENST00000555890 ZDHHC24Q6UX98 284 aa7.03□□□□□ -1.28
SLIRP-204ENST00000555890 CD300LGQ6UXG3 332 aa7.03□□□□□ -1.28
SLIRP-204ENST00000555890 TMC3Q7Z5M5 1100 aa7.03□□□□□ -1.28
SLIRP-204ENST00000555890 PCGF5Q86SE9 256 aa7.03□□□□□ -1.28
SLIRP-204ENST00000555890 SPATA2LQ8IUW3 424 aaPredicted RBP7.03□□□□□ -1.28
SLIRP-204ENST00000555890 COLGALT2Q8IYK4 626 aa7.03□□□□□ -1.28
SLIRP-204ENST00000555890 DEFB106AQ8N104 65 aa7.03□□□□□ -1.28
SLIRP-204ENST00000555890 LILRB2Q8N423 598 aa7.03□□□□□ -1.28
SLIRP-204ENST00000555890 ALLCQ8N6M5 410 aa7.03□□□□□ -1.28
SLIRP-204ENST00000555890 CELF2-AS1Q8N7Q2 184 aa7.03□□□□□ -1.28
SLIRP-204ENST00000555890 KLHL23Q8NBE8 558 aa7.03□□□□□ -1.28
SLIRP-204ENST00000555890 SLC35B2Q8TB61 432 aa7.03□□□□□ -1.28
SLIRP-204ENST00000555890 ACTL9Q8TC94 416 aa7.03□□□□□ -1.28
SLIRP-204ENST00000555890 FBXO25Q8TCJ0 367 aa7.03□□□□□ -1.28
SLIRP-204ENST00000555890 POF1BQ8WVV4 589 aa7.03□□□□□ -1.28
SLIRP-204ENST00000555890 RSAD2Q8WXG1 361 aa7.03□□□□□ -1.28
SLIRP-204ENST00000555890 IRGQQ8WZA9 623 aa7.03□□□□□ -1.28
SLIRP-204ENST00000555890 P3H4Q92791 437 aa7.03□□□□□ -1.28
SLIRP-204ENST00000555890 NXPE3Q969Y0 559 aa7.03□□□□□ -1.28
SLIRP-204ENST00000555890 MYLPFQ96A32 169 aa7.03□□□□□ -1.28
SLIRP-204ENST00000555890 FAM149B1Q96BN6 582 aa7.03□□□□□ -1.28
SLIRP-204ENST00000555890 PIWIL1Q96J94 861 aaKnown RBP7.03□□□□□ -1.28
SLIRP-204ENST00000555890 ZIM3Q96PE6 472 aa7.03□□□□□ -1.28
SLIRP-204ENST00000555890 RNF157Q96PX1 679 aa7.03□□□□□ -1.28
SLIRP-204ENST00000555890 PEBP4Q96S96 227 aa7.03□□□□□ -1.28
SLIRP-204ENST00000555890 SMOQ99835 787 aa7.03□□□□□ -1.28
SLIRP-204ENST00000555890 MRPL9Q9BYD2 267 aaKnown RBP7.03□□□□□ -1.28
SLIRP-204ENST00000555890 MIR1-1HGQ9H1L0 117 aa7.03□□□□□ -1.28
SLIRP-204ENST00000555890 NEUROG2Q9H2A3 272 aa7.03□□□□□ -1.28
SLIRP-204ENST00000555890 TBC1D17Q9HA65 648 aa7.03□□□□□ -1.28
SLIRP-204ENST00000555890 POPDC2Q9HBU9 364 aa7.03□□□□□ -1.28
SLIRP-204ENST00000555890 CSNK1G1Q9HCP0 422 aa7.03□□□□□ -1.28
SLIRP-204ENST00000555890 DMAP1Q9NPF5 467 aaPredicted RBP7.03□□□□□ -1.28
SLIRP-204ENST00000555890 TBC1D13Q9NVG8 400 aa7.03□□□□□ -1.28
SLIRP-204ENST00000555890 TMEM51Q9NW97 253 aa7.03□□□□□ -1.28
SLIRP-204ENST00000555890 SPATA6Q9NWH7 488 aaPredicted RBP7.03□□□□□ -1.28
SLIRP-204ENST00000555890 VPS18Q9P253 973 aa7.03□□□□□ -1.28
SLIRP-204ENST00000555890 DNPEPQ9ULA0 475 aa7.03□□□□□ -1.28
SLIRP-204ENST00000555890 PLAAQ9Y263 795 aa7.03□□□□□ -1.28
SLIRP-204ENST00000555890 ATP8A1Q9Y2Q0 1164 aa7.03□□□□□ -1.28
SLIRP-204ENST00000555890 PCDHGC4Q9Y5F7 938 aa7.03□□□□□ -1.28
SLIRP-204ENST00000555890 PTPRDP23468 1912 aa7.03□□□□□ -1.28
SLIRP-204ENST00000555890 F8P00451 2351 aa7.02□□□□□ -1.29
SLIRP-204ENST00000555890 PATJQ8NI35 1801 aa7.02□□□□□ -1.29
SLIRP-204ENST00000555890 CFAP69A5D8W1 941 aa7.02□□□□□ -1.29
SLIRP-204ENST00000555890 FIGNL2A6NMB9 653 aa7.02□□□□□ -1.29
SLIRP-204ENST00000555890 H3BQF6 201 aa7.02□□□□□ -1.29
SLIRP-204ENST00000555890 AGPSO00116 658 aa7.02□□□□□ -1.29
SLIRP-204ENST00000555890 SYN3O14994 580 aa7.02□□□□□ -1.29
SLIRP-204ENST00000555890 PAGE1O75459 146 aa7.02□□□□□ -1.29
SLIRP-204ENST00000555890 DGKIO75912 1065 aa7.02□□□□□ -1.29
SLIRP-204ENST00000555890 BEST1O76090 585 aa7.02□□□□□ -1.29
SLIRP-204ENST00000555890 DDHD2O94830 711 aa7.02□□□□□ -1.29
SLIRP-204ENST00000555890 OAZ2O95190 189 aa7.02□□□□□ -1.29
SLIRP-204ENST00000555890 ZBED1O96006 694 aa7.02□□□□□ -1.29
SLIRP-204ENST00000555890 CD48P09326 243 aa7.02□□□□□ -1.29
SLIRP-204ENST00000555890 RARGP13631 454 aa7.02□□□□□ -1.29
SLIRP-204ENST00000555890 IGFBP6P24592 240 aaPredicted RBP7.02□□□□□ -1.29
SLIRP-204ENST00000555890 STIP1P31948 543 aaKnown RBP7.02□□□□□ -1.29
SLIRP-204ENST00000555890 ARL4AP40617 200 aa7.02□□□□□ -1.29
SLIRP-204ENST00000555890 ARSEP51690 589 aa7.02□□□□□ -1.29
SLIRP-204ENST00000555890 ITGA8P53708 1063 aa7.02□□□□□ -1.29
SLIRP-204ENST00000555890 AIF1P55008 147 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms