RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 HEXIM1O94992 359 aaKnown RBP11.42□□□□□ -0.58
SHMT2-220ENST00000555634 IGSF6O95976 241 aa11.42□□□□□ -0.58
SHMT2-220ENST00000555634 KRT14P02533 472 aa11.42□□□□□ -0.58
SHMT2-220ENST00000555634 RBL1P28749 1068 aa11.42□□□□□ -0.58
SHMT2-220ENST00000555634 HLA-FP30511 346 aa11.42□□□□□ -0.58
SHMT2-220ENST00000555634 GJA4P35212 333 aa11.42□□□□□ -0.58
SHMT2-220ENST00000555634 ADCY8P40145 1251 aa11.42□□□□□ -0.58
SHMT2-220ENST00000555634 MAPK8P45983 427 aa11.42□□□□□ -0.58
SHMT2-220ENST00000555634 IFI35P80217 286 aaPredicted RBP11.42□□□□□ -0.58
SHMT2-220ENST00000555634 BASP1P80723 227 aaKnown RBP11.42□□□□□ -0.58
SHMT2-220ENST00000555634 SARNPP82979 210 aaKnown RBP11.42□□□□□ -0.58
SHMT2-220ENST00000555634 TNK2Q07912 1038 aa11.42□□□□□ -0.58
SHMT2-220ENST00000555634 PTK6Q13882 451 aa11.42□□□□□ -0.58
SHMT2-220ENST00000555634 HNRNPDQ14103 355 aaKnown RBP11.42□□□□□ -0.58
SHMT2-220ENST00000555634 LBRQ14739 615 aaKnown RBP11.42□□□□□ -0.58
SHMT2-220ENST00000555634 RNF43Q68DV7 783 aa11.42□□□□□ -0.58
SHMT2-220ENST00000555634 CEP128Q6ZU80 1094 aa11.42□□□□□ -0.58
SHMT2-220ENST00000555634 JAMLQ86YT9 394 aa11.42□□□□□ -0.58
SHMT2-220ENST00000555634 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.42□□□□□ -0.58
SHMT2-220ENST00000555634 ATP11CQ8NB49 1132 aa11.42□□□□□ -0.58
SHMT2-220ENST00000555634 OR7D4Q8NG98 312 aa11.42□□□□□ -0.58
SHMT2-220ENST00000555634 MYEOVQ96EZ4 313 aa11.42□□□□□ -0.58
SHMT2-220ENST00000555634 SPATA13Q96N96 652 aa11.42□□□□□ -0.58
SHMT2-220ENST00000555634 LRRC3BQ96PB8 259 aa11.42□□□□□ -0.58
SHMT2-220ENST00000555634 PLA2G2FQ9BZM2 168 aa11.42□□□□□ -0.58
SHMT2-220ENST00000555634 FAM129AQ9BZQ8 928 aa11.42□□□□□ -0.58
SHMT2-220ENST00000555634 HPS4Q9NQG7 708 aa11.42□□□□□ -0.58
SHMT2-220ENST00000555634 NDFIP2Q9NV92 336 aa11.42□□□□□ -0.58
SHMT2-220ENST00000555634 GTSE1Q9NYZ3 720 aa11.42□□□□□ -0.58
SHMT2-220ENST00000555634 ZNF212Q9UDV6 495 aa11.42□□□□□ -0.58
SHMT2-220ENST00000555634 VPS51Q9UID3 782 aa11.42□□□□□ -0.58
SHMT2-220ENST00000555634 SORCS3Q9UPU3 1222 aa11.42□□□□□ -0.58
SHMT2-220ENST00000555634 FARP1Q9Y4F1 1045 aaPredicted RBP11.42□□□□□ -0.58
SHMT2-220ENST00000555634 PIAS3Q9Y6X2 628 aa11.42□□□□□ -0.58
SHMT2-220ENST00000555634 A0A0D9SEW6 157 aa11.41□□□□□ -0.58
SHMT2-220ENST00000555634 TARSL2A2RTX5 802 aaKnown RBP11.41□□□□□ -0.58
SHMT2-220ENST00000555634 TBC1D3BA6NDS4 549 aa11.41□□□□□ -0.58
SHMT2-220ENST00000555634 LOC730098B7Z3J9 87 aa11.41□□□□□ -0.58
SHMT2-220ENST00000555634 SPECC1L-ADORA2AF8WAN1 911 aa11.41□□□□□ -0.58
SHMT2-220ENST00000555634 KCNK1O00180 336 aa11.41□□□□□ -0.58
SHMT2-220ENST00000555634 SMAPO00193 183 aa11.41□□□□□ -0.58
SHMT2-220ENST00000555634 NPC1O15118 1278 aa11.41□□□□□ -0.58
SHMT2-220ENST00000555634 TTI1O43156 1089 aa11.41□□□□□ -0.58
SHMT2-220ENST00000555634 ANXA9O76027 345 aa11.41□□□□□ -0.58
SHMT2-220ENST00000555634 SRPRAP08240 638 aaKnown RBP11.41□□□□□ -0.58
SHMT2-220ENST00000555634 RHOXF2BP0C7M4 288 aa11.41□□□□□ -0.58
SHMT2-220ENST00000555634 CES1P23141 567 aa11.41□□□□□ -0.58
SHMT2-220ENST00000555634 MZF1P28698 734 aaPredicted RBP11.41□□□□□ -0.58
SHMT2-220ENST00000555634 CD70P32970 193 aa11.41□□□□□ -0.58
SHMT2-220ENST00000555634 ACVRL1P37023 503 aa11.41□□□□□ -0.58
SHMT2-220ENST00000555634 FDFT1P37268 417 aa11.41□□□□□ -0.58
SHMT2-220ENST00000555634 GRIA2P42262 883 aa11.41□□□□□ -0.58
SHMT2-220ENST00000555634 VPS41P49754 854 aa11.41□□□□□ -0.58
SHMT2-220ENST00000555634 SERPINH1P50454 418 aaKnown RBP11.41□□□□□ -0.58
SHMT2-220ENST00000555634 PLK1P53350 603 aa11.41□□□□□ -0.58
SHMT2-220ENST00000555634 RHOAP61586 193 aa11.41□□□□□ -0.58
SHMT2-220ENST00000555634 ECT2LQ008S8 904 aa11.41□□□□□ -0.58
SHMT2-220ENST00000555634 CAV1Q03135 178 aa11.41□□□□□ -0.58
SHMT2-220ENST00000555634 GRSF1Q12849 480 aaKnown RBP eCLIP11.41□□□□□ -0.58
SHMT2-220ENST00000555634 SLC10A2Q12908 348 aaPredicted RBP11.41□□□□□ -0.58
SHMT2-220ENST00000555634 GPS1Q13098 491 aa11.41□□□□□ -0.58
SHMT2-220ENST00000555634 FUT11Q495W5 492 aa11.41□□□□□ -0.58
SHMT2-220ENST00000555634 FNDC3BQ53EP0 1204 aaKnown RBP11.41□□□□□ -0.58
SHMT2-220ENST00000555634 INO80DQ53TQ3 878 aaPredicted RBP11.41□□□□□ -0.58
SHMT2-220ENST00000555634 CFAP58Q5T655 872 aa11.41□□□□□ -0.58
SHMT2-220ENST00000555634 MBLAC2Q68D91 279 aa11.41□□□□□ -0.58
SHMT2-220ENST00000555634 TTC27Q6P3X3 843 aa11.41□□□□□ -0.58
SHMT2-220ENST00000555634 PPP1R21Q6ZMI0 780 aa11.41□□□□□ -0.58
SHMT2-220ENST00000555634 TRMT11Q7Z4G4 463 aaKnown RBP11.41□□□□□ -0.58
SHMT2-220ENST00000555634 IFT20Q8IY31 132 aa11.41□□□□□ -0.58
SHMT2-220ENST00000555634 SLC44A3Q8N4M1 653 aa11.41□□□□□ -0.58
SHMT2-220ENST00000555634 TERB1Q8NA31 727 aa11.41□□□□□ -0.58
SHMT2-220ENST00000555634 ST13P5Q8NFI4 369 aaPredicted RBP11.41□□□□□ -0.58
SHMT2-220ENST00000555634 TTC8Q8TAM2 541 aa11.41□□□□□ -0.58
SHMT2-220ENST00000555634 RTP4Q96DX8 246 aa11.41□□□□□ -0.58
SHMT2-220ENST00000555634 SNF8Q96H20 258 aa11.41□□□□□ -0.58
SHMT2-220ENST00000555634 SHDQ96IW2 340 aa11.41□□□□□ -0.58
SHMT2-220ENST00000555634 GDAP1L1Q96MZ0 367 aa11.41□□□□□ -0.58
SHMT2-220ENST00000555634 P2RY13Q9BPV8 354 aa11.41□□□□□ -0.58
SHMT2-220ENST00000555634 RHOXF2Q9BQY4 288 aa11.41□□□□□ -0.58
SHMT2-220ENST00000555634 FSD1LQ9BXM9 530 aa11.41□□□□□ -0.58
SHMT2-220ENST00000555634 ACE2Q9BYF1 805 aaPredicted RBP11.41□□□□□ -0.58
SHMT2-220ENST00000555634 CEP44Q9C0F1 390 aa11.41□□□□□ -0.58
SHMT2-220ENST00000555634 GBA3Q9H227 469 aa11.41□□□□□ -0.58
SHMT2-220ENST00000555634 NOL6Q9H6R4 1146 aaKnown RBP11.41□□□□□ -0.58
SHMT2-220ENST00000555634 FAM114A2Q9NRY5 505 aa11.41□□□□□ -0.58
SHMT2-220ENST00000555634 FBXL21Q9UKT6 434 aa11.41□□□□□ -0.58
SHMT2-220ENST00000555634 MRPS17Q9Y2R5 130 aaKnown RBP11.41□□□□□ -0.58
SHMT2-220ENST00000555634 AAR2Q9Y312 384 aaKnown RBP11.41□□□□□ -0.58
SHMT2-220ENST00000555634 UNC80Q8N2C7 3258 aa11.41□□□□□ -0.58
SHMT2-220ENST00000555634 C5orf60A6NFR6 353 aa11.4□□□□□ -0.58
SHMT2-220ENST00000555634 ERI2A8K979 691 aaKnown RBP11.4□□□□□ -0.58
SHMT2-220ENST00000555634 AP3B1O00203 1094 aa11.4□□□□□ -0.58
SHMT2-220ENST00000555634 MAN2B1O00754 1011 aa11.4□□□□□ -0.58
SHMT2-220ENST00000555634 PSMD3O43242 534 aa11.4□□□□□ -0.58
SHMT2-220ENST00000555634 RAD51CO43502 376 aa11.4□□□□□ -0.58
SHMT2-220ENST00000555634 GCATO75600 419 aa11.4□□□□□ -0.58
SHMT2-220ENST00000555634 KAT7O95251 611 aa11.4□□□□□ -0.58
SHMT2-220ENST00000555634 VAV1P15498 845 aa11.4□□□□□ -0.58
SHMT2-220ENST00000555634 PTPN3P26045 913 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms