RNA–Protein interactions for RNA: ENST00000555609.5

TUBB3-209, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 1,855 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-209ENST00000555609 KRT34O76011 436 aa16.46■□□□□ 0.22
TUBB3-209ENST00000555609 PDE5AO76074 875 aa16.46■□□□□ 0.22
TUBB3-209ENST00000555609 UPP2O95045 317 aa16.46■□□□□ 0.22
TUBB3-209ENST00000555609 FYNP06241 537 aa16.46■□□□□ 0.22
TUBB3-209ENST00000555609 SMIM10L2AP0DMW4 78 aa16.46■□□□□ 0.22
TUBB3-209ENST00000555609 SMIM10L2BP0DMW5 78 aa16.46■□□□□ 0.22
TUBB3-209ENST00000555609 RAG1P15918 1043 aa16.46■□□□□ 0.22
TUBB3-209ENST00000555609 LIN52Q52LA3 116 aa16.46■□□□□ 0.22
TUBB3-209ENST00000555609 THEMIS2Q5TEJ8 643 aa16.46■□□□□ 0.22
TUBB3-209ENST00000555609 RNF111Q6ZNA4 994 aa16.46■□□□□ 0.22
TUBB3-209ENST00000555609 HPS6Q86YV9 775 aa16.46■□□□□ 0.22
TUBB3-209ENST00000555609 CNTN4Q8IWV2 1026 aa16.46■□□□□ 0.22
TUBB3-209ENST00000555609 IRGQQ8WZA9 623 aa16.46■□□□□ 0.22
TUBB3-209ENST00000555609 NDRG1Q92597 394 aaKnown RBP16.46■□□□□ 0.22
TUBB3-209ENST00000555609 DLG3Q92796 817 aa16.46■□□□□ 0.22
TUBB3-209ENST00000555609 LENG8Q96PV6 779 aaPredicted RBP16.46■□□□□ 0.22
TUBB3-209ENST00000555609 C1QTNF1Q9BXJ1 281 aa16.46■□□□□ 0.22
TUBB3-209ENST00000555609 EPB41L1Q9H4G0 881 aa16.46■□□□□ 0.22
TUBB3-209ENST00000555609 CYP4F11Q9HBI6 524 aa16.46■□□□□ 0.22
TUBB3-209ENST00000555609 MRM3Q9HC36 420 aaKnown RBP16.46■□□□□ 0.22
TUBB3-209ENST00000555609 IARS2Q9NSE4 1012 aaKnown RBP16.46■□□□□ 0.22
TUBB3-209ENST00000555609 HACD3Q9P035 362 aa16.46■□□□□ 0.22
TUBB3-209ENST00000555609 TSC2P49815 1807 aa16.45■□□□□ 0.22
TUBB3-209ENST00000555609 ZNF236Q9UL36 1845 aa16.45■□□□□ 0.22
TUBB3-209ENST00000555609 SYNJ2BP-COX16A0A087WUM0 186 aa16.45■□□□□ 0.22
TUBB3-209ENST00000555609 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.45■□□□□ 0.22
TUBB3-209ENST00000555609 E9PBE3 544 aa16.45■□□□□ 0.22
TUBB3-209ENST00000555609 H3BNX3 289 aa16.45■□□□□ 0.22
TUBB3-209ENST00000555609 DENRO43583 198 aaKnown RBP16.45■□□□□ 0.22
TUBB3-209ENST00000555609 KLHL41O60662 606 aa16.45■□□□□ 0.22
TUBB3-209ENST00000555609 TADA2AO75478 443 aa16.45■□□□□ 0.22
TUBB3-209ENST00000555609 F2P00734 622 aa16.45■□□□□ 0.22
TUBB3-209ENST00000555609 HTR7P34969 479 aa16.45■□□□□ 0.22
TUBB3-209ENST00000555609 NDUFV1P49821 464 aa16.45■□□□□ 0.22
TUBB3-209ENST00000555609 KPNA2P52292 529 aaKnown RBP16.45■□□□□ 0.22
TUBB3-209ENST00000555609 MSLNQ13421 630 aaPredicted RBP16.45■□□□□ 0.22
TUBB3-209ENST00000555609 CYLC2Q14093 348 aaPredicted RBP16.45■□□□□ 0.22
TUBB3-209ENST00000555609 SNX17Q15036 470 aa16.45■□□□□ 0.22
TUBB3-209ENST00000555609 SFT2D3Q587I9 215 aa16.45■□□□□ 0.22
TUBB3-209ENST00000555609 PCID2Q5JVF3 399 aa16.45■□□□□ 0.22
TUBB3-209ENST00000555609 DCLRE1AQ6PJP8 1040 aa16.45■□□□□ 0.22
TUBB3-209ENST00000555609 ZC3HC1Q86WB0 502 aaKnown RBP16.45■□□□□ 0.22
TUBB3-209ENST00000555609 CNTD1Q8N815 330 aa16.45■□□□□ 0.22
TUBB3-209ENST00000555609 PHC3Q8NDX5 983 aa16.45■□□□□ 0.22
TUBB3-209ENST00000555609 STYXQ8WUJ0 223 aa16.45■□□□□ 0.22
TUBB3-209ENST00000555609 MFSD3Q96ES6 412 aa16.45■□□□□ 0.22
TUBB3-209ENST00000555609 TRIM62Q9BVG3 475 aa16.45■□□□□ 0.22
TUBB3-209ENST00000555609 ULBP1Q9BZM6 244 aa16.45■□□□□ 0.22
TUBB3-209ENST00000555609 ZNF385DQ9H6B1 395 aa16.45■□□□□ 0.22
TUBB3-209ENST00000555609 MRPL40Q9NQ50 206 aaKnown RBP16.45■□□□□ 0.22
TUBB3-209ENST00000555609 COX16Q9P0S2 106 aa16.45■□□□□ 0.22
TUBB3-209ENST00000555609 SMIM31A0A1B0GVY4 71 aa16.44■□□□□ 0.22
TUBB3-209ENST00000555609 FAM72CH0Y354 149 aa16.44■□□□□ 0.22
TUBB3-209ENST00000555609 NPHS1O60500 1241 aa16.44■□□□□ 0.22
TUBB3-209ENST00000555609 RNASEH1O60930 286 aaKnown RBP16.44■□□□□ 0.22
TUBB3-209ENST00000555609 BEST1O76090 585 aa16.44■□□□□ 0.22
TUBB3-209ENST00000555609 ZCCHC18P0CG32 403 aa16.44■□□□□ 0.22
TUBB3-209ENST00000555609 NFKB1P19838 968 aa16.44■□□□□ 0.22
TUBB3-209ENST00000555609 PPARGP37231 505 aaPredicted RBP16.44■□□□□ 0.22
TUBB3-209ENST00000555609 CXCR3P49682 368 aa16.44■□□□□ 0.22
TUBB3-209ENST00000555609 CRYBB1P53674 252 aaPredicted RBP16.44■□□□□ 0.22
TUBB3-209ENST00000555609 SOX4Q06945 474 aaPredicted RBP16.44■□□□□ 0.22
TUBB3-209ENST00000555609 TMEM62Q0P6H9 643 aa16.44■□□□□ 0.22
TUBB3-209ENST00000555609 TRIP10Q15642 601 aa16.44■□□□□ 0.22
TUBB3-209ENST00000555609 MMEL1Q495T6 779 aa16.44■□□□□ 0.22
TUBB3-209ENST00000555609 CERCAMQ5T4B2 595 aa16.44■□□□□ 0.22
TUBB3-209ENST00000555609 LDLRAD1Q5T700 205 aa16.44■□□□□ 0.22
TUBB3-209ENST00000555609 FAM72AQ5TYM5 149 aa16.44■□□□□ 0.22
TUBB3-209ENST00000555609 PM20D1Q6GTS8 502 aa16.44■□□□□ 0.22
TUBB3-209ENST00000555609 FAM72DQ6L9T8 149 aa16.44■□□□□ 0.22
TUBB3-209ENST00000555609 DPP9Q86TI2 863 aa16.44■□□□□ 0.22
TUBB3-209ENST00000555609 FAM72BQ86X60 149 aa16.44■□□□□ 0.22
TUBB3-209ENST00000555609 PGAM4Q8N0Y7 254 aa16.44■□□□□ 0.22
TUBB3-209ENST00000555609 SCML4Q8N228 414 aa16.44■□□□□ 0.22
TUBB3-209ENST00000555609 PQLC1Q8N2U9 271 aa16.44■□□□□ 0.22
TUBB3-209ENST00000555609 DPF3Q92784 378 aa16.44■□□□□ 0.22
TUBB3-209ENST00000555609 TASP1Q9H6P5 420 aa16.44■□□□□ 0.22
TUBB3-209ENST00000555609 VCX3AQ9NNX9 186 aa16.44■□□□□ 0.22
TUBB3-209ENST00000555609 DMAP1Q9NPF5 467 aaPredicted RBP16.44■□□□□ 0.22
TUBB3-209ENST00000555609 TMPRSS4Q9NRS4 437 aa16.44■□□□□ 0.22
TUBB3-209ENST00000555609 SLC38A7Q9NVC3 462 aa16.44■□□□□ 0.22
TUBB3-209ENST00000555609 KLK14Q9P0G3 267 aa16.44■□□□□ 0.22
TUBB3-209ENST00000555609 CDYLQ9Y232 598 aa16.44■□□□□ 0.22
TUBB3-209ENST00000555609 CLDN5O00501 218 aa16.44■□□□□ 0.22
TUBB3-209ENST00000555609 NRP1O14786 923 aa16.44■□□□□ 0.22
TUBB3-209ENST00000555609 ATP9BO43861 1147 aa16.44■□□□□ 0.22
TUBB3-209ENST00000555609 LTFP02788 710 aa16.44■□□□□ 0.22
TUBB3-209ENST00000555609 PABPC4LP0CB38 370 aaKnown RBP16.44■□□□□ 0.22
TUBB3-209ENST00000555609 TFEBP19484 476 aa16.44■□□□□ 0.22
TUBB3-209ENST00000555609 GRIA4P48058 902 aa16.44■□□□□ 0.22
TUBB3-209ENST00000555609 MAP3K7CLP57077 242 aa16.44■□□□□ 0.22
TUBB3-209ENST00000555609 IRF9Q00978 393 aa16.44■□□□□ 0.22
TUBB3-209ENST00000555609 PKN3Q6P5Z2 889 aa16.44■□□□□ 0.22
TUBB3-209ENST00000555609 BNC2Q6ZN30 1099 aaPredicted RBP16.44■□□□□ 0.22
TUBB3-209ENST00000555609 HFE2Q6ZVN8 426 aa16.44■□□□□ 0.22
TUBB3-209ENST00000555609 BEND5Q7L4P6 421 aa16.44■□□□□ 0.22
TUBB3-209ENST00000555609 TMEM151AQ8N4L1 468 aa16.44■□□□□ 0.22
TUBB3-209ENST00000555609 MARVELD2Q8N4S9 558 aa16.44■□□□□ 0.22
TUBB3-209ENST00000555609 MAPK15Q8TD08 544 aa16.44■□□□□ 0.22
TUBB3-209ENST00000555609 MAML3Q96JK9 1138 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms