RNA–Protein interactions for RNA: ENST00000555462.5

PPP4R3A-208, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3A, Length 3,236 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-208ENST00000555462 PTK2BQ14289 1009 aa17.36■□□□□ 0.37
PPP4R3A-208ENST00000555462 CLEC6AQ6EIG7 209 aa17.36■□□□□ 0.37
PPP4R3A-208ENST00000555462 DRAXINQ8NBI3 349 aaPredicted RBP17.36■□□□□ 0.37
PPP4R3A-208ENST00000555462 FLAD1Q8NFF5 587 aa17.36■□□□□ 0.37
PPP4R3A-208ENST00000555462 PIGVQ9NUD9 493 aa17.36■□□□□ 0.37
PPP4R3A-208ENST00000555462 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.36■□□□□ 0.37
PPP4R3A-208ENST00000555462 PCDHB12Q9Y5F1 795 aa17.36■□□□□ 0.37
PPP4R3A-208ENST00000555462 ZNF839A8K0R7 811 aa17.35■□□□□ 0.37
PPP4R3A-208ENST00000555462 PMPCBO75439 489 aa17.35■□□□□ 0.37
PPP4R3A-208ENST00000555462 ERCC2P18074 760 aa17.35■□□□□ 0.37
PPP4R3A-208ENST00000555462 SPRP35270 261 aaPredicted RBP17.35■□□□□ 0.37
PPP4R3A-208ENST00000555462 GARSP41250 739 aaKnown RBP17.35■□□□□ 0.37
PPP4R3A-208ENST00000555462 VGLL4Q14135 290 aa17.35■□□□□ 0.37
PPP4R3A-208ENST00000555462 ARHGAP18Q8N392 663 aa17.35■□□□□ 0.37
PPP4R3A-208ENST00000555462 NPWQ8N729 165 aa17.35■□□□□ 0.37
PPP4R3A-208ENST00000555462 RNF34Q969K3 372 aa17.35■□□□□ 0.37
PPP4R3A-208ENST00000555462 DGCR14Q96DF8 476 aaKnown RBP17.35■□□□□ 0.37
PPP4R3A-208ENST00000555462 PRICKLE1Q96MT3 831 aaPredicted RBP17.35■□□□□ 0.37
PPP4R3A-208ENST00000555462 E7ENX8 843 aa17.35■□□□□ 0.37
PPP4R3A-208ENST00000555462 I6L893 689 aaPredicted RBP17.35■□□□□ 0.37
PPP4R3A-208ENST00000555462 DFFAO00273 331 aa17.35■□□□□ 0.37
PPP4R3A-208ENST00000555462 SLC5A2P31639 672 aa17.35■□□□□ 0.37
PPP4R3A-208ENST00000555462 ZBTB17Q13105 803 aa17.35■□□□□ 0.37
PPP4R3A-208ENST00000555462 CSHL1Q14406 222 aa17.35■□□□□ 0.37
PPP4R3A-208ENST00000555462 TBCCQ15814 346 aa17.35■□□□□ 0.37
PPP4R3A-208ENST00000555462 AGKQ53H12 422 aa17.35■□□□□ 0.37
PPP4R3A-208ENST00000555462 CELF3Q5SZQ8 465 aaKnown RBP17.35■□□□□ 0.37
PPP4R3A-208ENST00000555462 LRRC8EQ6NSJ5 796 aa17.35■□□□□ 0.37
PPP4R3A-208ENST00000555462 LRRC8BQ6P9F7 803 aa17.35■□□□□ 0.37
PPP4R3A-208ENST00000555462 FSTL5Q8N475 847 aaPredicted RBP17.35■□□□□ 0.37
PPP4R3A-208ENST00000555462 LENG1Q96BZ8 264 aaPredicted RBP17.35■□□□□ 0.37
PPP4R3A-208ENST00000555462 LRRC39Q96DD0 335 aa17.35■□□□□ 0.37
PPP4R3A-208ENST00000555462 ZBED3Q96IU2 234 aaPredicted RBP17.35■□□□□ 0.37
PPP4R3A-208ENST00000555462 TMEM79Q9BSE2 394 aa17.35■□□□□ 0.37
PPP4R3A-208ENST00000555462 SETD4Q9NVD3 440 aa17.35■□□□□ 0.37
PPP4R3A-208ENST00000555462 TTC3P53804 2025 aa17.35■□□□□ 0.37
PPP4R3A-208ENST00000555462 IL18RAPO95256 599 aa17.34■□□□□ 0.37
PPP4R3A-208ENST00000555462 CHRNA4P43681 627 aa17.34■□□□□ 0.37
PPP4R3A-208ENST00000555462 RPL5P46777 297 aaKnown RBP17.34■□□□□ 0.37
PPP4R3A-208ENST00000555462 PLIN5Q00G26 463 aa17.34■□□□□ 0.37
PPP4R3A-208ENST00000555462 LAMC2Q13753 1193 aa17.34■□□□□ 0.37
PPP4R3A-208ENST00000555462 HNRNPDQ14103 355 aaKnown RBP17.34■□□□□ 0.37
PPP4R3A-208ENST00000555462 PRPSAP1Q14558 356 aa17.34■□□□□ 0.37
PPP4R3A-208ENST00000555462 DPYSL2Q16555 572 aa17.34■□□□□ 0.37
PPP4R3A-208ENST00000555462 GEN1Q17RS7 908 aa17.34■□□□□ 0.37
PPP4R3A-208ENST00000555462 FAM91A1Q658Y4 838 aa17.34■□□□□ 0.37
PPP4R3A-208ENST00000555462 KRT80Q6KB66 452 aa17.34■□□□□ 0.37
PPP4R3A-208ENST00000555462 TRIM67Q6ZTA4 783 aa17.34■□□□□ 0.37
PPP4R3A-208ENST00000555462 CEP97Q8IW35 865 aa17.34■□□□□ 0.37
PPP4R3A-208ENST00000555462 LRCH3Q96II8 777 aa17.34■□□□□ 0.37
PPP4R3A-208ENST00000555462 RBBP8Q99708 897 aa17.34■□□□□ 0.37
PPP4R3A-208ENST00000555462 DOLKQ9UPQ8 538 aa17.34■□□□□ 0.37
PPP4R3A-208ENST00000555462 RGSL1A5PLK6 1076 aa17.34■□□□□ 0.37
PPP4R3A-208ENST00000555462 ADM5C9JUS6 153 aa17.34■□□□□ 0.37
PPP4R3A-208ENST00000555462 GNAO1P09471 354 aa17.34■□□□□ 0.37
PPP4R3A-208ENST00000555462 TPSB2P20231 275 aa17.34■□□□□ 0.37
PPP4R3A-208ENST00000555462 YWHAQP27348 245 aa17.34■□□□□ 0.37
PPP4R3A-208ENST00000555462 CASP2P42575 452 aa17.34■□□□□ 0.37
PPP4R3A-208ENST00000555462 PSMD7P51665 324 aa17.34■□□□□ 0.37
PPP4R3A-208ENST00000555462 CDH13P55290 713 aa17.34■□□□□ 0.37
PPP4R3A-208ENST00000555462 YBX1P67809 324 aaKnown RBP17.34■□□□□ 0.37
PPP4R3A-208ENST00000555462 TPSAB1Q15661 275 aa17.34■□□□□ 0.37
PPP4R3A-208ENST00000555462 PDCD6IPQ8WUM4 868 aaKnown RBP17.34■□□□□ 0.37
PPP4R3A-208ENST00000555462 RTP4Q96DX8 246 aa17.34■□□□□ 0.37
PPP4R3A-208ENST00000555462 KLRG1Q96E93 195 aa17.34■□□□□ 0.37
PPP4R3A-208ENST00000555462 DNAJC28Q9NX36 388 aa17.34■□□□□ 0.37
PPP4R3A-208ENST00000555462 ATXN10Q9UBB4 475 aa17.34■□□□□ 0.37
PPP4R3A-208ENST00000555462 TSR3Q9UJK0 312 aaKnown RBP17.34■□□□□ 0.37
PPP4R3A-208ENST00000555462 COPG1Q9Y678 874 aaKnown RBP17.34■□□□□ 0.37
PPP4R3A-208ENST00000555462 HNRNPCP07910 306 aaKnown RBP eCLIP17.34■□□□□ 0.37
PPP4R3A-208ENST00000555462 THRAP10827 490 aa17.34■□□□□ 0.37
PPP4R3A-208ENST00000555462 RPL14P50914 215 aaKnown RBP17.34■□□□□ 0.37
PPP4R3A-208ENST00000555462 HABP4Q5JVS0 413 aaKnown RBP17.34■□□□□ 0.37
PPP4R3A-208ENST00000555462 CATSPER4Q7RTX7 472 aa17.34■□□□□ 0.37
PPP4R3A-208ENST00000555462 STK39Q9UEW8 545 aa17.34■□□□□ 0.37
PPP4R3A-208ENST00000555462 FNDC3AQ9Y2H6 1198 aaKnown RBP17.34■□□□□ 0.37
PPP4R3A-208ENST00000555462 GRID2O43424 1007 aa17.33■□□□□ 0.37
PPP4R3A-208ENST00000555462 ABCD1P33897 745 aa17.33■□□□□ 0.37
PPP4R3A-208ENST00000555462 YAP1P46937 504 aaKnown RBP17.33■□□□□ 0.37
PPP4R3A-208ENST00000555462 PLOD1Q02809 727 aaPredicted RBP17.33■□□□□ 0.37
PPP4R3A-208ENST00000555462 ARID2Q68CP9 1835 aa17.33■□□□□ 0.36
PPP4R3A-208ENST00000555462 IL1BP01584 269 aa17.33■□□□□ 0.36
PPP4R3A-208ENST00000555462 FAM58BPP0C7Q3 252 aa17.33■□□□□ 0.36
PPP4R3A-208ENST00000555462 CHRM3P20309 590 aa17.33■□□□□ 0.36
PPP4R3A-208ENST00000555462 HARS2P49590 506 aaKnown RBP17.33■□□□□ 0.36
PPP4R3A-208ENST00000555462 SERPINB8P50452 374 aa17.33■□□□□ 0.36
PPP4R3A-208ENST00000555462 ADGRE1Q14246 886 aa17.33■□□□□ 0.36
PPP4R3A-208ENST00000555462 ZNF423Q2M1K9 1284 aa17.33■□□□□ 0.36
PPP4R3A-208ENST00000555462 OGFRL1Q5TC84 451 aaPredicted RBP17.33■□□□□ 0.36
PPP4R3A-208ENST00000555462 B3GNT6Q6ZMB0 384 aa17.33■□□□□ 0.36
PPP4R3A-208ENST00000555462 RIN3Q8TB24 985 aa17.33■□□□□ 0.36
PPP4R3A-208ENST00000555462 TSNARE1Q96NA8 513 aa17.33■□□□□ 0.36
PPP4R3A-208ENST00000555462 HAPLN3Q96S86 360 aa17.33■□□□□ 0.36
PPP4R3A-208ENST00000555462 SNX25Q9H3E2 840 aa17.33■□□□□ 0.36
PPP4R3A-208ENST00000555462 EPS15L1Q9UBC2 864 aa17.33■□□□□ 0.36
PPP4R3A-208ENST00000555462 CDYLQ9Y232 598 aa17.33■□□□□ 0.36
PPP4R3A-208ENST00000555462 MDM4O15151 490 aa17.32■□□□□ 0.36
PPP4R3A-208ENST00000555462 HDAC3O15379 428 aa17.32■□□□□ 0.36
PPP4R3A-208ENST00000555462 AKAP10O43572 662 aa17.32■□□□□ 0.36
PPP4R3A-208ENST00000555462 NCAM1P13591 858 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms