RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 GALCP54803 685 aa13.98□□□□□ -0.17
SNX6-203ENST00000555416 KRT83P78385 493 aa13.98□□□□□ -0.17
SNX6-203ENST00000555416 TBX2Q13207 712 aaPredicted RBP13.98□□□□□ -0.17
SNX6-203ENST00000555416 CCDC122Q5T0U0 273 aa13.98□□□□□ -0.17
SNX6-203ENST00000555416 DCAF12L1Q5VU92 463 aa13.98□□□□□ -0.17
SNX6-203ENST00000555416 TXNRD3NBQ6F5E7 133 aa13.98□□□□□ -0.17
SNX6-203ENST00000555416 ZNF783Q6ZMS7 281 aa13.98□□□□□ -0.17
SNX6-203ENST00000555416 RTL3Q8N8U3 475 aaKnown RBP13.98□□□□□ -0.17
SNX6-203ENST00000555416 NETO2Q8NC67 525 aa13.98□□□□□ -0.17
SNX6-203ENST00000555416 CADM4Q8NFZ8 388 aa13.98□□□□□ -0.17
SNX6-203ENST00000555416 OR8K1Q8NGG5 319 aa13.98□□□□□ -0.17
SNX6-203ENST00000555416 OR2A12Q8NGT7 310 aa13.98□□□□□ -0.17
SNX6-203ENST00000555416 OR2I1PQ8NGU4 316 aa13.98□□□□□ -0.17
SNX6-203ENST00000555416 C1orf216Q8TAB5 229 aa13.98□□□□□ -0.17
SNX6-203ENST00000555416 NETO1Q8TDF5 533 aa13.98□□□□□ -0.17
SNX6-203ENST00000555416 GANCQ8TET4 914 aa13.98□□□□□ -0.17
SNX6-203ENST00000555416 DNASE2BQ8WZ79 361 aa13.98□□□□□ -0.17
SNX6-203ENST00000555416 TRIM11Q96F44 468 aa13.98□□□□□ -0.17
SNX6-203ENST00000555416 ORAI3Q9BRQ5 295 aa13.98□□□□□ -0.17
SNX6-203ENST00000555416 BTBD1Q9H0C5 482 aa13.98□□□□□ -0.17
SNX6-203ENST00000555416 CAPN10Q9HC96 672 aa13.98□□□□□ -0.17
SNX6-203ENST00000555416 EVLQ9UI08 416 aaPredicted RBP13.98□□□□□ -0.17
SNX6-203ENST00000555416 EIF2B4Q9UI10 523 aaKnown RBP13.98□□□□□ -0.17
SNX6-203ENST00000555416 PPM1HQ9ULR3 514 aa13.98□□□□□ -0.17
SNX6-203ENST00000555416 AP4E1Q9UPM8 1137 aa13.98□□□□□ -0.17
SNX6-203ENST00000555416 FCF1Q9Y324 198 aaKnown RBP13.98□□□□□ -0.17
SNX6-203ENST00000555416 SCINQ9Y6U3 715 aa13.98□□□□□ -0.17
SNX6-203ENST00000555416 CACNA1AO00555 2505 aa13.97□□□□□ -0.17
SNX6-203ENST00000555416 C4orf47A7E2U8 309 aa13.97□□□□□ -0.17
SNX6-203ENST00000555416 MEI4A8MW99 385 aa13.97□□□□□ -0.17
SNX6-203ENST00000555416 MCF2LO15068 1137 aa13.97□□□□□ -0.17
SNX6-203ENST00000555416 RNASEH1O60930 286 aaKnown RBP13.97□□□□□ -0.17
SNX6-203ENST00000555416 MFAP3LO75121 409 aa13.97□□□□□ -0.17
SNX6-203ENST00000555416 RNASEH2AO75792 299 aaKnown RBP13.97□□□□□ -0.17
SNX6-203ENST00000555416 CFIP05156 583 aa13.97□□□□□ -0.17
SNX6-203ENST00000555416 IGHV4-34P06331 123 aa13.97□□□□□ -0.17
SNX6-203ENST00000555416 SERPINH1P50454 418 aaKnown RBP13.97□□□□□ -0.17
SNX6-203ENST00000555416 PUM1Q14671 1186 aaKnown RBP eCLIP13.97□□□□□ -0.17
SNX6-203ENST00000555416 DUOXA1Q1HG43 343 aa13.97□□□□□ -0.17
SNX6-203ENST00000555416 TTC31Q49AM3 519 aaPredicted RBP13.97□□□□□ -0.17
SNX6-203ENST00000555416 IL31Q6EBC2 164 aa13.97□□□□□ -0.17
SNX6-203ENST00000555416 C22orf39Q6P5X5 142 aa13.97□□□□□ -0.17
SNX6-203ENST00000555416 SLC23A3Q6PIS1 610 aa13.97□□□□□ -0.17
SNX6-203ENST00000555416 NCEH1Q6PIU2 408 aa13.97□□□□□ -0.17
SNX6-203ENST00000555416 SARM1Q6SZW1 724 aa13.97□□□□□ -0.17
SNX6-203ENST00000555416 USP30Q70CQ3 517 aa13.97□□□□□ -0.17
SNX6-203ENST00000555416 VPS36Q86VN1 386 aa13.97□□□□□ -0.17
SNX6-203ENST00000555416 RGL4Q8IZJ4 473 aa13.97□□□□□ -0.17
SNX6-203ENST00000555416 HDDC3Q8N4P3 179 aa13.97□□□□□ -0.17
SNX6-203ENST00000555416 FOXJ1Q92949 421 aa13.97□□□□□ -0.17
SNX6-203ENST00000555416 VOPP1Q96AW1 172 aa13.97□□□□□ -0.17
SNX6-203ENST00000555416 HMCESQ96FZ2 354 aa13.97□□□□□ -0.17
SNX6-203ENST00000555416 NUP85Q9BW27 656 aa13.97□□□□□ -0.17
SNX6-203ENST00000555416 MIR1-1HGQ9H1L0 117 aa13.97□□□□□ -0.17
SNX6-203ENST00000555416 DHX35Q9H5Z1 703 aaKnown RBP13.97□□□□□ -0.17
SNX6-203ENST00000555416 EBF2Q9HAK2 575 aa13.97□□□□□ -0.17
SNX6-203ENST00000555416 ABHD10Q9NUJ1 306 aa13.97□□□□□ -0.17
SNX6-203ENST00000555416 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.97□□□□□ -0.17
SNX6-203ENST00000555416 SPTBN2O15020 2390 aa13.97□□□□□ -0.17
SNX6-203ENST00000555416 FAM47DPA6NHR8 397 aa13.96□□□□□ -0.17
SNX6-203ENST00000555416 WASH4PA8MWX3 477 aa13.96□□□□□ -0.17
SNX6-203ENST00000555416 RAMP2O60895 175 aa13.96□□□□□ -0.17
SNX6-203ENST00000555416 FSBPO95073 299 aa13.96□□□□□ -0.17
SNX6-203ENST00000555416 SERPINF2P08697 491 aa13.96□□□□□ -0.17
SNX6-203ENST00000555416 GOT1P17174 413 aa13.96□□□□□ -0.17
SNX6-203ENST00000555416 ENGP17813 658 aa13.96□□□□□ -0.17
SNX6-203ENST00000555416 C5AR1P21730 350 aa13.96□□□□□ -0.17
SNX6-203ENST00000555416 HOXD12P35452 270 aa13.96□□□□□ -0.17
SNX6-203ENST00000555416 LIMK1P53667 647 aa13.96□□□□□ -0.17
SNX6-203ENST00000555416 AIF1P55008 147 aa13.96□□□□□ -0.17
SNX6-203ENST00000555416 BNC1Q01954 994 aa13.96□□□□□ -0.17
SNX6-203ENST00000555416 TRIM14Q14142 442 aa13.96□□□□□ -0.17
SNX6-203ENST00000555416 SMTNL2Q2TAL5 461 aa13.96□□□□□ -0.17
SNX6-203ENST00000555416 KCNT1Q5JUK3 1230 aa13.96□□□□□ -0.17
SNX6-203ENST00000555416 SYCP2LQ5T4T6 812 aa13.96□□□□□ -0.17
SNX6-203ENST00000555416 ERMARDQ5T6L9 678 aa13.96□□□□□ -0.17
SNX6-203ENST00000555416 LAYNQ6UX15 382 aa13.96□□□□□ -0.17
SNX6-203ENST00000555416 DPY19L3Q6ZPD9 716 aa13.96□□□□□ -0.17
SNX6-203ENST00000555416 ZCCHC9Q8N567 271 aaKnown RBP13.96□□□□□ -0.17
SNX6-203ENST00000555416 PIP4K2CQ8TBX8 421 aa13.96□□□□□ -0.17
SNX6-203ENST00000555416 OR8D1Q8WZ84 308 aa13.96□□□□□ -0.17
SNX6-203ENST00000555416 SNX19Q92543 992 aa13.96□□□□□ -0.17
SNX6-203ENST00000555416 BIRC7Q96CA5 298 aa13.96□□□□□ -0.17
SNX6-203ENST00000555416 EPAS1Q99814 870 aa13.96□□□□□ -0.17
SNX6-203ENST00000555416 MAGEH1Q9H213 219 aa13.96□□□□□ -0.17
SNX6-203ENST00000555416 SGK2Q9HBY8 427 aa13.96□□□□□ -0.17
SNX6-203ENST00000555416 MRPL47Q9HD33 250 aaKnown RBP13.96□□□□□ -0.17
SNX6-203ENST00000555416 SPTLC3Q9NUV7 552 aa13.96□□□□□ -0.17
SNX6-203ENST00000555416 SLC6A14Q9UN76 642 aa13.96□□□□□ -0.17
SNX6-203ENST00000555416 MFHAS1Q9Y4C4 1052 aa13.96□□□□□ -0.17
SNX6-203ENST00000555416 RASA4BC9J798 803 aa13.95□□□□□ -0.18
SNX6-203ENST00000555416 RASA4O43374 803 aa13.95□□□□□ -0.18
SNX6-203ENST00000555416 PRPSAP2O60256 369 aa13.95□□□□□ -0.18
SNX6-203ENST00000555416 FOXD2O60548 495 aaPredicted RBP13.95□□□□□ -0.18
SNX6-203ENST00000555416 RNF8O76064 485 aa13.95□□□□□ -0.18
SNX6-203ENST00000555416 ADH1BP00325 375 aa13.95□□□□□ -0.18
SNX6-203ENST00000555416 GKP32189 559 aa13.95□□□□□ -0.18
SNX6-203ENST00000555416 CHRNA3P32297 505 aa13.95□□□□□ -0.18
SNX6-203ENST00000555416 MAPK8P45983 427 aa13.95□□□□□ -0.18
SNX6-203ENST00000555416 CLCN6P51797 869 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms