RNA–Protein interactions for RNA: ENST00000555405.5

NEK9-205, Transcript of NIMA related kinase 9, humanhuman

TSL 1 (best)

Gene NEK9, Length 3,357 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-205ENST00000555405 EPHA5P54756 1037 aa10.4□□□□□ -0.75
NEK9-205ENST00000555405 LMAN2Q12907 356 aa10.4□□□□□ -0.75
NEK9-205ENST00000555405 DHCR24Q15392 516 aa10.4□□□□□ -0.75
NEK9-205ENST00000555405 ATXN7L2Q5T6C5 722 aaPredicted RBP10.4□□□□□ -0.75
NEK9-205ENST00000555405 CNTD1Q8N815 330 aa10.4□□□□□ -0.75
NEK9-205ENST00000555405 ASIC4Q96FT7 647 aa10.4□□□□□ -0.75
NEK9-205ENST00000555405 CINPQ9BW66 212 aaPredicted RBP10.4□□□□□ -0.75
NEK9-205ENST00000555405 PLA2G2FQ9BZM2 168 aa10.4□□□□□ -0.75
NEK9-205ENST00000555405 BRD9Q9H8M2 597 aa10.4□□□□□ -0.75
NEK9-205ENST00000555405 UBA2Q9UBT2 640 aaPredicted RBP10.4□□□□□ -0.75
NEK9-205ENST00000555405 CHMP2BQ9UQN3 213 aa10.4□□□□□ -0.75
NEK9-205ENST00000555405 CCDC151A5D8V7 595 aa10.39□□□□□ -0.75
NEK9-205ENST00000555405 TBC1D3BA6NDS4 549 aa10.39□□□□□ -0.75
NEK9-205ENST00000555405 ANTXRLA6NF34 631 aa10.39□□□□□ -0.75
NEK9-205ENST00000555405 NCAM2O15394 837 aa10.39□□□□□ -0.75
NEK9-205ENST00000555405 TMEM63AO94886 807 aa10.39□□□□□ -0.75
NEK9-205ENST00000555405 OLFM2O95897 454 aa10.39□□□□□ -0.75
NEK9-205ENST00000555405 HLA-DQB2P05538 268 aa10.39□□□□□ -0.75
NEK9-205ENST00000555405 HOXB8P17481 243 aaPredicted RBP10.39□□□□□ -0.75
NEK9-205ENST00000555405 DDX6P26196 483 aaKnown RBP eCLIP10.39□□□□□ -0.755e-6■□□□□ 8.4
NEK9-205ENST00000555405 CTSOP43234 321 aaPredicted RBP10.39□□□□□ -0.75
NEK9-205ENST00000555405 MMP13P45452 471 aa10.39□□□□□ -0.75
NEK9-205ENST00000555405 SLC6A11P48066 632 aa10.39□□□□□ -0.75
NEK9-205ENST00000555405 RGS19P49795 217 aa10.39□□□□□ -0.75
NEK9-205ENST00000555405 SEMG2Q02383 582 aa10.39□□□□□ -0.75
NEK9-205ENST00000555405 TFF2Q03403 129 aa10.39□□□□□ -0.75
NEK9-205ENST00000555405 CUL1Q13616 776 aa10.39□□□□□ -0.75
NEK9-205ENST00000555405 SEPT6Q14141 434 aa10.39□□□□□ -0.75
NEK9-205ENST00000555405 FASTKD3Q14CZ7 662 aaKnown RBP10.39□□□□□ -0.75
NEK9-205ENST00000555405 UAP1Q16222 522 aaPredicted RBP10.39□□□□□ -0.75
NEK9-205ENST00000555405 CCDC38Q502W7 563 aa10.39□□□□□ -0.75
NEK9-205ENST00000555405 UBAP2Q5T6F2 1119 aaKnown RBP10.39□□□□□ -0.75
NEK9-205ENST00000555405 ZNF683Q8IZ20 524 aa10.39□□□□□ -0.75
NEK9-205ENST00000555405 OLFM3Q96PB7 478 aa10.39□□□□□ -0.75
NEK9-205ENST00000555405 SEMA3CQ99985 751 aa10.39□□□□□ -0.75
NEK9-205ENST00000555405 FSD1LQ9BXM9 530 aa10.39□□□□□ -0.75
NEK9-205ENST00000555405 SEMA4AQ9H3S1 761 aa10.39□□□□□ -0.75
NEK9-205ENST00000555405 PPANQ9NQ55 473 aaKnown RBP10.39□□□□□ -0.75
NEK9-205ENST00000555405 THG1LQ9NWX6 298 aaKnown RBP10.39□□□□□ -0.75
NEK9-205ENST00000555405 GREB1Q4ZG55 1949 aa10.39□□□□□ -0.75
NEK9-205ENST00000555405 HACD1B0YJ81 288 aa10.39□□□□□ -0.75
NEK9-205ENST00000555405 BUD23O43709 281 aaKnown RBP10.39□□□□□ -0.75
NEK9-205ENST00000555405 HOXD9P28356 352 aaPredicted RBP10.39□□□□□ -0.75
NEK9-205ENST00000555405 ZNF135P52742 658 aaPredicted RBP10.39□□□□□ -0.75
NEK9-205ENST00000555405 PPIDQ08752 370 aaKnown RBP10.39□□□□□ -0.75
NEK9-205ENST00000555405 XRCC4Q13426 336 aa10.39□□□□□ -0.75
NEK9-205ENST00000555405 PRPSAP1Q14558 356 aa10.39□□□□□ -0.75
NEK9-205ENST00000555405 PPIL6Q8IXY8 311 aa10.39□□□□□ -0.75
NEK9-205ENST00000555405 OR52K1Q8NGK4 314 aa10.39□□□□□ -0.75
NEK9-205ENST00000555405 ARHGEF2Q92974 986 aaKnown RBP10.39□□□□□ -0.75
NEK9-205ENST00000555405 TBC1D14Q9P2M4 693 aa10.39□□□□□ -0.75
NEK9-205ENST00000555405 SLCO3A1Q9UIG8 710 aa10.39□□□□□ -0.75
NEK9-205ENST00000555405 NEU3Q9UQ49 428 aa10.39□□□□□ -0.75
NEK9-205ENST00000555405 OTOL1A6NHN0 477 aaPredicted RBP10.39□□□□□ -0.75
NEK9-205ENST00000555405 MATN3O15232 486 aa10.39□□□□□ -0.75
NEK9-205ENST00000555405 GREM1O60565 184 aa10.39□□□□□ -0.75
NEK9-205ENST00000555405 AGTP01019 485 aa10.39□□□□□ -0.75
NEK9-205ENST00000555405 CHRNA4P43681 627 aa10.39□□□□□ -0.75
NEK9-205ENST00000555405 RENBPP51606 427 aa10.39□□□□□ -0.75
NEK9-205ENST00000555405 RHOAP61586 193 aa10.39□□□□□ -0.75
NEK9-205ENST00000555405 SERINC3Q13530 473 aa10.39□□□□□ -0.75
NEK9-205ENST00000555405 LBRQ14739 615 aaKnown RBP10.39□□□□□ -0.75
NEK9-205ENST00000555405 DRICH1Q6PGQ1 229 aaPredicted RBP10.39□□□□□ -0.75
NEK9-205ENST00000555405 ZDHHC24Q6UX98 284 aa10.39□□□□□ -0.75
NEK9-205ENST00000555405 PALM2Q8IXS6 379 aa10.39□□□□□ -0.75
NEK9-205ENST00000555405 PDIK1LQ8N165 341 aa10.39□□□□□ -0.75
NEK9-205ENST00000555405 UMODL1-AS1Q8N2C9 162 aa10.39□□□□□ -0.75
NEK9-205ENST00000555405 BBS5Q8N3I7 341 aa10.39□□□□□ -0.75
NEK9-205ENST00000555405 HDAC11Q96DB2 347 aa10.39□□□□□ -0.75
NEK9-205ENST00000555405 FEM1AQ9BSK4 669 aa10.39□□□□□ -0.75
NEK9-205ENST00000555405 FICDQ9BVA6 458 aa10.39□□□□□ -0.75
NEK9-205ENST00000555405 FRMD8P1Q9BZ68 369 aaPredicted RBP10.39□□□□□ -0.75
NEK9-205ENST00000555405 PRDM6Q9NQX0 595 aa10.39□□□□□ -0.75
NEK9-205ENST00000555405 PPARGC1AQ9UBK2 798 aaKnown RBP10.39□□□□□ -0.75
NEK9-205ENST00000555405 CD207Q9UJ71 328 aa10.39□□□□□ -0.75
NEK9-205ENST00000555405 TTC28Q96AY4 2481 aa10.38□□□□□ -0.75
NEK9-205ENST00000555405 SMAD6O43541 496 aaKnown RBP10.38□□□□□ -0.75
NEK9-205ENST00000555405 IVDP26440 423 aa10.38□□□□□ -0.75
NEK9-205ENST00000555405 HLA-FP30511 346 aa10.38□□□□□ -0.75
NEK9-205ENST00000555405 NDST2P52849 883 aa10.38□□□□□ -0.75
NEK9-205ENST00000555405 MESP2Q0VG99 397 aa10.38□□□□□ -0.75
NEK9-205ENST00000555405 ZNF77Q15935 545 aa10.38□□□□□ -0.75
NEK9-205ENST00000555405 HIF1AQ16665 826 aa10.38□□□□□ -0.75
NEK9-205ENST00000555405 CFAP58Q5T655 872 aa10.38□□□□□ -0.75
NEK9-205ENST00000555405 WDR93Q6P2C0 686 aa10.38□□□□□ -0.75
NEK9-205ENST00000555405 Q6ZNB5 142 aa10.38□□□□□ -0.75
NEK9-205ENST00000555405 SYDE1Q6ZW31 735 aaPredicted RBP10.38□□□□□ -0.75
NEK9-205ENST00000555405 CCHCR1Q8TD31 782 aa10.38□□□□□ -0.75
NEK9-205ENST00000555405 RMDN1Q96DB5 314 aa10.38□□□□□ -0.75
NEK9-205ENST00000555405 MAGEH1Q9H213 219 aa10.38□□□□□ -0.75
NEK9-205ENST00000555405 PRO3102Q9H379 93 aa10.38□□□□□ -0.75
NEK9-205ENST00000555405 VPS51Q9UID3 782 aa10.38□□□□□ -0.75
NEK9-205ENST00000555405 ZNF510Q9Y2H8 683 aa10.38□□□□□ -0.75
NEK9-205ENST00000555405 PCDHGC4Q9Y5F7 938 aa10.38□□□□□ -0.75
NEK9-205ENST00000555405 IGLV3-10A0A075B6K4 115 aa10.38□□□□□ -0.75
NEK9-205ENST00000555405 A0A0U1RQS6 177 aa10.38□□□□□ -0.75
NEK9-205ENST00000555405 SLC9A3R1O14745 358 aaPredicted RBP10.38□□□□□ -0.75
NEK9-205ENST00000555405 ADH5P11766 374 aa10.38□□□□□ -0.75
NEK9-205ENST00000555405 LAMP2P13473 410 aa10.38□□□□□ -0.75
NEK9-205ENST00000555405 CCNCP24863 283 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms