RNA–Protein interactions for RNA: ENST00000555301.1

CHD8-208, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-208ENST00000555301 SUN2Q9UH99 717 aa14.58□□□□□ -0.08
CHD8-208ENST00000555301 SNX12Q9UMY4 172 aa14.58□□□□□ -0.08
CHD8-208ENST00000555301 STON1Q9Y6Q2 735 aa14.58□□□□□ -0.08
CHD8-208ENST00000555301 J3KR12 359 aa14.57□□□□□ -0.08
CHD8-208ENST00000555301 ATP9BO43861 1147 aa14.57□□□□□ -0.08
CHD8-208ENST00000555301 CEP104O60308 925 aa14.57□□□□□ -0.08
CHD8-208ENST00000555301 MAFKO60675 156 aa14.57□□□□□ -0.08
CHD8-208ENST00000555301 KLF8O95600 359 aaPredicted RBP14.57□□□□□ -0.08
CHD8-208ENST00000555301 PRLRP16471 622 aa14.57□□□□□ -0.08
CHD8-208ENST00000555301 CCNCP24863 283 aa14.57□□□□□ -0.08
CHD8-208ENST00000555301 CXCR5P32302 372 aa14.57□□□□□ -0.08
CHD8-208ENST00000555301 STK19P49842 368 aaPredicted RBP14.57□□□□□ -0.08
CHD8-208ENST00000555301 SLC10A2Q12908 348 aaPredicted RBP14.57□□□□□ -0.08
CHD8-208ENST00000555301 KLF1Q13351 362 aaPredicted RBP14.57□□□□□ -0.08
CHD8-208ENST00000555301 TMCO4Q5TGY1 634 aa14.57□□□□□ -0.08
CHD8-208ENST00000555301 PAPD7Q5XG87 772 aaKnown RBP14.57□□□□□ -0.08
CHD8-208ENST00000555301 NPNTQ6UXI9 565 aa14.57□□□□□ -0.08
CHD8-208ENST00000555301 LINGO4Q6UY18 593 aa14.57□□□□□ -0.08
CHD8-208ENST00000555301 NYAP1Q6ZVC0 841 aa14.57□□□□□ -0.08
CHD8-208ENST00000555301 SPEM1Q8N4L4 309 aa14.57□□□□□ -0.08
CHD8-208ENST00000555301 TXNDC5Q8NBS9 432 aaKnown RBP14.57□□□□□ -0.08
CHD8-208ENST00000555301 CCNYQ8ND76 341 aa14.57□□□□□ -0.08
CHD8-208ENST00000555301 MYO19Q96H55 970 aa14.57□□□□□ -0.08
CHD8-208ENST00000555301 OLFM3Q96PB7 478 aa14.57□□□□□ -0.08
CHD8-208ENST00000555301 TSGA13Q96PP4 275 aa14.57□□□□□ -0.08
CHD8-208ENST00000555301 OSBPL9Q96SU4 736 aa14.57□□□□□ -0.08
CHD8-208ENST00000555301 ACOX2Q99424 681 aa14.57□□□□□ -0.08
CHD8-208ENST00000555301 GABRG3Q99928 467 aa14.57□□□□□ -0.08
CHD8-208ENST00000555301 HERPUD2Q9BSE4 406 aa14.57□□□□□ -0.08
CHD8-208ENST00000555301 CEP44Q9C0F1 390 aa14.57□□□□□ -0.08
CHD8-208ENST00000555301 TMEM245Q9H330 911 aa14.57□□□□□ -0.08
CHD8-208ENST00000555301 PDFQ9HBH1 243 aa14.57□□□□□ -0.08
CHD8-208ENST00000555301 CACNA2D2Q9NY47 1150 aa14.57□□□□□ -0.08
CHD8-208ENST00000555301 DLGAP2Q9P1A6 1054 aa14.57□□□□□ -0.08
CHD8-208ENST00000555301 UBA2Q9UBT2 640 aaPredicted RBP14.57□□□□□ -0.08
CHD8-208ENST00000555301 SLCO3A1Q9UIG8 710 aa14.57□□□□□ -0.08
CHD8-208ENST00000555301 MMP17Q9ULZ9 603 aa14.57□□□□□ -0.08
CHD8-208ENST00000555301 A0A0C4DFX4 3053 aa14.56□□□□□ -0.08
CHD8-208ENST00000555301 ANTXRLA6NF34 631 aa14.56□□□□□ -0.08
CHD8-208ENST00000555301 HACD1B0YJ81 288 aa14.56□□□□□ -0.08
CHD8-208ENST00000555301 KIF2AO00139 706 aaPredicted RBP14.56□□□□□ -0.08
CHD8-208ENST00000555301 PI15O43692 258 aa14.56□□□□□ -0.08
CHD8-208ENST00000555301 SYNCRIPO60506 623 aaKnown RBP14.56□□□□□ -0.08
CHD8-208ENST00000555301 GPR37L1O60883 481 aa14.56□□□□□ -0.08
CHD8-208ENST00000555301 MAP3K6O95382 1288 aa14.56□□□□□ -0.08
CHD8-208ENST00000555301 CD160O95971 181 aa14.56□□□□□ -0.08
CHD8-208ENST00000555301 MT-CO1P00395 513 aa14.56□□□□□ -0.08
CHD8-208ENST00000555301 SRCP12931 536 aa14.56□□□□□ -0.08
CHD8-208ENST00000555301 PECAM1P16284 738 aaPredicted RBP14.56□□□□□ -0.08
CHD8-208ENST00000555301 CASQ1P31415 396 aa14.56□□□□□ -0.08
CHD8-208ENST00000555301 PPIDQ08752 370 aaKnown RBP14.56□□□□□ -0.08
CHD8-208ENST00000555301 XRCC4Q13426 336 aa14.56□□□□□ -0.08
CHD8-208ENST00000555301 GAS6Q14393 721 aa14.56□□□□□ -0.08
CHD8-208ENST00000555301 STARD3Q14849 445 aa14.56□□□□□ -0.08
CHD8-208ENST00000555301 DLG2Q15700 870 aa14.56□□□□□ -0.08
CHD8-208ENST00000555301 HNRNPA1L2Q32P51 320 aaKnown RBP14.56□□□□□ -0.08
CHD8-208ENST00000555301 ACCSLQ4AC99 568 aa14.56□□□□□ -0.08
CHD8-208ENST00000555301 MAMSTRQ6ZN01 415 aa14.56□□□□□ -0.08
CHD8-208ENST00000555301 ARHGAP36Q6ZRI8 547 aa14.56□□□□□ -0.08
CHD8-208ENST00000555301 SYT13Q7L8C5 426 aa14.56□□□□□ -0.08
CHD8-208ENST00000555301 BBS5Q8N3I7 341 aa14.56□□□□□ -0.08
CHD8-208ENST00000555301 CCDC33Q8N5R6 958 aa14.56□□□□□ -0.08
CHD8-208ENST00000555301 FATE1Q969F0 183 aa14.56□□□□□ -0.08
CHD8-208ENST00000555301 ISG20Q96AZ6 181 aaKnown RBP14.56□□□□□ -0.08
CHD8-208ENST00000555301 HAUS1Q96CS2 278 aa14.56□□□□□ -0.08
CHD8-208ENST00000555301 NAP1L3Q99457 506 aaPredicted RBP14.56□□□□□ -0.08
CHD8-208ENST00000555301 C1QTNF1Q9BXJ1 281 aa14.56□□□□□ -0.08
CHD8-208ENST00000555301 FRMD8P1Q9BZ68 369 aaPredicted RBP14.56□□□□□ -0.08
CHD8-208ENST00000555301 ZDHHC4Q9NPG8 344 aa14.56□□□□□ -0.08
CHD8-208ENST00000555301 SAE1Q9UBE0 346 aaPredicted RBP14.56□□□□□ -0.08
CHD8-208ENST00000555301 KIAA1549LQ6ZVL6 1849 aa14.55□□□□□ -0.08
CHD8-208ENST00000555301 EDDM13A0A1B0GTR0 161 aa14.55□□□□□ -0.08
CHD8-208ENST00000555301 TARSL2A2RTX5 802 aaKnown RBP14.55□□□□□ -0.08
CHD8-208ENST00000555301 PRR33A8MZF0 331 aa14.55□□□□□ -0.08
CHD8-208ENST00000555301 WASH3PC4AMC7 463 aa14.55□□□□□ -0.08
CHD8-208ENST00000555301 SGK1O00141 431 aa14.55□□□□□ -0.08
CHD8-208ENST00000555301 MCF2LO15068 1137 aa14.55□□□□□ -0.08
CHD8-208ENST00000555301 MATN3O15232 486 aa14.55□□□□□ -0.08
CHD8-208ENST00000555301 ADAM23O75077 832 aa14.55□□□□□ -0.08
CHD8-208ENST00000555301 ZNF189O75820 626 aaPredicted RBP14.55□□□□□ -0.08
CHD8-208ENST00000555301 FGGP02679 453 aa14.55□□□□□ -0.08
CHD8-208ENST00000555301 EPHX1P07099 455 aa14.55□□□□□ -0.08
CHD8-208ENST00000555301 HOXB2P14652 356 aa14.55□□□□□ -0.08
CHD8-208ENST00000555301 PRKCHP24723 683 aa14.55□□□□□ -0.08
CHD8-208ENST00000555301 WASP42768 502 aa14.55□□□□□ -0.08
CHD8-208ENST00000555301 RENBPP51606 427 aa14.55□□□□□ -0.08
CHD8-208ENST00000555301 CCR3P51677 355 aa14.55□□□□□ -0.08
CHD8-208ENST00000555301 OTUD4Q01804 1114 aaKnown RBP14.55□□□□□ -0.08
CHD8-208ENST00000555301 MTAPQ13126 283 aa14.55□□□□□ -0.08
CHD8-208ENST00000555301 HNRNPDQ14103 355 aaKnown RBP14.55□□□□□ -0.08
CHD8-208ENST00000555301 NOMO1Q15155 1222 aa14.55□□□□□ -0.08
CHD8-208ENST00000555301 CRY1Q16526 586 aa14.55□□□□□ -0.08
CHD8-208ENST00000555301 LONRF2Q1L5Z9 754 aa14.55□□□□□ -0.08
CHD8-208ENST00000555301 PKN3Q6P5Z2 889 aa14.55□□□□□ -0.08
CHD8-208ENST00000555301 SYT10Q6XYQ8 523 aa14.55□□□□□ -0.08
CHD8-208ENST00000555301 LEKR1Q6ZMV7 388 aa14.55□□□□□ -0.08
CHD8-208ENST00000555301 CCDC13Q8IYE1 715 aa14.55□□□□□ -0.08
CHD8-208ENST00000555301 RASGEF1CQ8N431 466 aa14.55□□□□□ -0.08
CHD8-208ENST00000555301 PCDH20Q8N6Y1 951 aaKnown RBP14.55□□□□□ -0.08
CHD8-208ENST00000555301 ACTL9Q8TC94 416 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms