RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 MAGEH1Q9H213 219 aa11.16□□□□□ -0.62
SHMT2-218ENST00000555213 LRRC19Q9H756 370 aa11.16□□□□□ -0.62
SHMT2-218ENST00000555213 CWC15Q9P013 229 aaKnown RBP11.16□□□□□ -0.62
SHMT2-218ENST00000555213 DLGAP2Q9P1A6 1054 aa11.16□□□□□ -0.62
SHMT2-218ENST00000555213 ZNF212Q9UDV6 495 aa11.16□□□□□ -0.62
SHMT2-218ENST00000555213 MIA3Q5JRA6 1907 aa11.15□□□□□ -0.62
SHMT2-218ENST00000555213 ZSCAN5CA6NGD5 496 aaPredicted RBP11.15□□□□□ -0.62
SHMT2-218ENST00000555213 ZNF487B1APH4 448 aa11.15□□□□□ -0.62
SHMT2-218ENST00000555213 CCDC188H7C350 402 aa11.15□□□□□ -0.62
SHMT2-218ENST00000555213 CBX4O00257 560 aa11.15□□□□□ -0.62
SHMT2-218ENST00000555213 RAD51CO43502 376 aa11.15□□□□□ -0.62
SHMT2-218ENST00000555213 SYNCRIPO60506 623 aaKnown RBP11.15□□□□□ -0.62
SHMT2-218ENST00000555213 SRPRAP08240 638 aaKnown RBP11.15□□□□□ -0.62
SHMT2-218ENST00000555213 HOXB2P14652 356 aa11.15□□□□□ -0.62
SHMT2-218ENST00000555213 ERCC2P18074 760 aa11.15□□□□□ -0.62
SHMT2-218ENST00000555213 MZF1P28698 734 aaPredicted RBP11.15□□□□□ -0.62
SHMT2-218ENST00000555213 NTSR1P30989 418 aa11.15□□□□□ -0.62
SHMT2-218ENST00000555213 CETN2P41208 172 aa11.15□□□□□ -0.62
SHMT2-218ENST00000555213 CXCL12P48061 93 aa11.15□□□□□ -0.62
SHMT2-218ENST00000555213 DGKEP52429 567 aa11.15□□□□□ -0.62
SHMT2-218ENST00000555213 NDST2P52849 883 aa11.15□□□□□ -0.62
SHMT2-218ENST00000555213 ECT2LQ008S8 904 aa11.15□□□□□ -0.62
SHMT2-218ENST00000555213 FZD5Q13467 585 aa11.15□□□□□ -0.62
SHMT2-218ENST00000555213 TRADDQ15628 312 aa11.15□□□□□ -0.62
SHMT2-218ENST00000555213 TFDP3Q5H9I0 405 aa11.15□□□□□ -0.62
SHMT2-218ENST00000555213 SEL1L2Q5TEA6 688 aa11.15□□□□□ -0.62
SHMT2-218ENST00000555213 BBS12Q6ZW61 710 aa11.15□□□□□ -0.62
SHMT2-218ENST00000555213 SYT13Q7L8C5 426 aa11.15□□□□□ -0.62
SHMT2-218ENST00000555213 CCDC50Q8IVM0 306 aa11.15□□□□□ -0.62
SHMT2-218ENST00000555213 KLHL7Q8IXQ5 586 aa11.15□□□□□ -0.62
SHMT2-218ENST00000555213 APCDD1Q8J025 514 aa11.15□□□□□ -0.62
SHMT2-218ENST00000555213 UMODL1-AS1Q8N2C9 162 aa11.15□□□□□ -0.62
SHMT2-218ENST00000555213 CCDC33Q8N5R6 958 aa11.15□□□□□ -0.62
SHMT2-218ENST00000555213 GPR161Q8N6U8 529 aaKnown RBP11.15□□□□□ -0.62
SHMT2-218ENST00000555213 IL17RCQ8NAC3 791 aa11.15□□□□□ -0.62
SHMT2-218ENST00000555213 KDM1BQ8NB78 822 aa11.15□□□□□ -0.62
SHMT2-218ENST00000555213 TXNDC5Q8NBS9 432 aaKnown RBP11.15□□□□□ -0.62
SHMT2-218ENST00000555213 PCDH19Q8TAB3 1148 aa11.15□□□□□ -0.62
SHMT2-218ENST00000555213 C1orf54Q8WWF1 131 aa11.15□□□□□ -0.62
SHMT2-218ENST00000555213 SORCS1Q8WY21 1168 aa11.15□□□□□ -0.62
SHMT2-218ENST00000555213 ANKRD7Q92527 254 aa11.15□□□□□ -0.62
SHMT2-218ENST00000555213 RNF157Q96PX1 679 aa11.15□□□□□ -0.62
SHMT2-218ENST00000555213 PRRX2Q99811 253 aa11.15□□□□□ -0.62
SHMT2-218ENST00000555213 LRFN3Q9BTN0 628 aa11.15□□□□□ -0.62
SHMT2-218ENST00000555213 MAK16Q9BXY0 300 aaKnown RBP11.15□□□□□ -0.62
SHMT2-218ENST00000555213 PRDM16Q9HAZ2 1276 aa11.15□□□□□ -0.62
SHMT2-218ENST00000555213 CACNA2D2Q9NY47 1150 aa11.15□□□□□ -0.62
SHMT2-218ENST00000555213 THAP10Q9P2Z0 257 aaPredicted RBP11.15□□□□□ -0.62
SHMT2-218ENST00000555213 PCYOX1Q9UHG3 505 aa11.15□□□□□ -0.62
SHMT2-218ENST00000555213 RAB21Q9UL25 225 aa11.15□□□□□ -0.62
SHMT2-218ENST00000555213 MMP17Q9ULZ9 603 aa11.15□□□□□ -0.62
SHMT2-218ENST00000555213 NEU2Q9Y3R4 380 aa11.15□□□□□ -0.62
SHMT2-218ENST00000555213 STON1Q9Y6Q2 735 aa11.15□□□□□ -0.62
SHMT2-218ENST00000555213 MYOFQ9NZM1 2061 aa11.15□□□□□ -0.63
SHMT2-218ENST00000555213 A0A0D9SEW6 157 aa11.14□□□□□ -0.63
SHMT2-218ENST00000555213 CXorf51AA0A1B0GTR3 108 aa11.14□□□□□ -0.63
SHMT2-218ENST00000555213 ARHGAP42A6NI28 874 aa11.14□□□□□ -0.63
SHMT2-218ENST00000555213 RASA4BC9J798 803 aa11.14□□□□□ -0.63
SHMT2-218ENST00000555213 RASA4O43374 803 aa11.14□□□□□ -0.63
SHMT2-218ENST00000555213 PHF2O75151 1096 aa11.14□□□□□ -0.63
SHMT2-218ENST00000555213 ALDH1A2O94788 518 aa11.14□□□□□ -0.63
SHMT2-218ENST00000555213 RHOXF2BP0C7M4 288 aa11.14□□□□□ -0.63
SHMT2-218ENST00000555213 ZFXP17010 805 aaPredicted RBP11.14□□□□□ -0.63
SHMT2-218ENST00000555213 COILP38432 576 aaPredicted RBP11.14□□□□□ -0.63
SHMT2-218ENST00000555213 KCNJ1P48048 391 aa11.14□□□□□ -0.63
SHMT2-218ENST00000555213 CLCN6P51797 869 aa11.14□□□□□ -0.63
SHMT2-218ENST00000555213 SLC7A5Q01650 507 aa11.14□□□□□ -0.63
SHMT2-218ENST00000555213 ZNF234Q14588 700 aa11.14□□□□□ -0.63
SHMT2-218ENST00000555213 CCNG2Q16589 344 aa11.14□□□□□ -0.63
SHMT2-218ENST00000555213 ANKRD20A8PQ5CZ79 823 aa11.14□□□□□ -0.63
SHMT2-218ENST00000555213 TMEM215Q68D42 235 aa11.14□□□□□ -0.63
SHMT2-218ENST00000555213 MAMSTRQ6ZN01 415 aa11.14□□□□□ -0.63
SHMT2-218ENST00000555213 METTL3Q86U44 580 aaKnown RBP11.14□□□□□ -0.63
SHMT2-218ENST00000555213 C1orf210Q8IVY1 113 aa11.14□□□□□ -0.63
SHMT2-218ENST00000555213 TSTD1Q8NFU3 115 aa11.14□□□□□ -0.63
SHMT2-218ENST00000555213 OR7D4Q8NG98 312 aa11.14□□□□□ -0.63
SHMT2-218ENST00000555213 OR52K2Q8NGK3 314 aa11.14□□□□□ -0.63
SHMT2-218ENST00000555213 CYB5D2Q8WUJ1 264 aa11.14□□□□□ -0.63
SHMT2-218ENST00000555213 MAGOHBQ96A72 148 aaKnown RBP11.14□□□□□ -0.63
SHMT2-218ENST00000555213 CCDC114Q96M63 670 aa11.14□□□□□ -0.63
SHMT2-218ENST00000555213 NAP1L3Q99457 506 aaPredicted RBP11.14□□□□□ -0.63
SHMT2-218ENST00000555213 GABRG3Q99928 467 aa11.14□□□□□ -0.63
SHMT2-218ENST00000555213 RHOXF2Q9BQY4 288 aa11.14□□□□□ -0.63
SHMT2-218ENST00000555213 POLMQ9NP87 494 aaPredicted RBP11.14□□□□□ -0.63
SHMT2-218ENST00000555213 SAE1Q9UBE0 346 aaPredicted RBP11.14□□□□□ -0.63
SHMT2-218ENST00000555213 AMACRQ9UHK6 382 aa11.14□□□□□ -0.63
SHMT2-218ENST00000555213 VPS51Q9UID3 782 aa11.14□□□□□ -0.63
SHMT2-218ENST00000555213 INTS6Q9UL03 887 aaKnown RBP11.14□□□□□ -0.63
SHMT2-218ENST00000555213 ERVW-1Q9UQF0 538 aa11.14□□□□□ -0.63
SHMT2-218ENST00000555213 OR51B4Q9Y5P0 310 aa11.14□□□□□ -0.63
SHMT2-218ENST00000555213 TARSL2A2RTX5 802 aaKnown RBP11.13□□□□□ -0.63
SHMT2-218ENST00000555213 SGK1O00141 431 aa11.13□□□□□ -0.63
SHMT2-218ENST00000555213 DFFAO00273 331 aa11.13□□□□□ -0.63
SHMT2-218ENST00000555213 APOL1O14791 398 aa11.13□□□□□ -0.63
SHMT2-218ENST00000555213 DCLK1O15075 740 aa11.13□□□□□ -0.63
SHMT2-218ENST00000555213 CST8O60676 142 aa11.13□□□□□ -0.63
SHMT2-218ENST00000555213 PAPSS2O95340 614 aaPredicted RBP11.13□□□□□ -0.63
SHMT2-218ENST00000555213 APBB3O95704 486 aa11.13□□□□□ -0.63
SHMT2-218ENST00000555213 EPHX1P07099 455 aa11.13□□□□□ -0.63
SHMT2-218ENST00000555213 AMPD1P23109 780 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms